Rhizobium bangladeshense: J2J98_00580
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Entry
J2J98_00580 CDS
T07228
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rban03016
]
J2J98_00580 (truB)
Enzymes [BR:
rban01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J2J98_00580 (truB)
Transfer RNA biogenesis [BR:
rban03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J2J98_00580 (truB)
Prokaryotic type
J2J98_00580 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
QSY88692
LinkDB
All DBs
Position
complement(121820..122752)
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AA seq
310 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLYKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGEVTQSSDKRPSEQHIRDILPKYIGTI
SQVPPQFSAIKIAGERAYDLARDGEAVEIPSREVEIFRLTLLACPDANTAHFEVECGKGT
YVRALARDFGRELGCYGHISGLRRTFVAPFAEDAMVPLADLVALEAIEDMDERLAALDAL
LIDTCEALSALPHLVINDDQAHRLKMGNPILVRGRDAPIAESEAYATARGKLIAIGEIGQ
GEFRPKRVFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaagggccgaccgatttccggctggctgatcctagacaag
ccggtggatttcggctcgacggaagccgtttccaagatcaagtggctctacaaggcgcag
aaggccggccatgccggcacgctcgatccgctcgcctccggcatgctgccgatcgcgctc
ggcgatgcgaccaagaccgttccctatgtgatggacggccgcaaaatctacgaattcacc
gtcagctggggcgaggagcgcgccacggacgatctcgaaggcgaggtcactcagagctcg
gacaagcggccaagcgaacagcatatccgcgatatcctgccgaaatatatcggcaccatc
agccaggtgccgccgcagttttccgcaatcaagatagcgggagaacgcgcctatgacctg
gcgcgcgacggtgaagccgtcgagatcccgtcgcgggaagtggagatctttcggctgacc
ctgcttgcctgccctgacgccaataccgcccatttcgaagtggaatgcggcaagggcacg
tatgtgcgggcgctcgctcgcgatttcggccgcgagctcggctgctacggtcacatatcc
ggcctgcggcgcaccttcgtcgcgcccttcgcggaggacgccatggtgccgctcgccgac
ctggtggcgctggaagcgatcgaggacatggacgagcggctcgccgccctcgacgcgctg
ctgatcgacacctgcgaggcgctttcggcgctgccccatctcgtcatcaacgacgaccag
gcgcacaggctgaagatgggtaatccgatcctggtacgcggccgggatgcgccgattgcc
gagagcgaagcctatgcgacggcgcgcggcaagctgatcgcgatcggcgagatcggccag
ggcgaatttcgtcccaagcgcgtttttgcctga
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