Rhizobium bangladeshense: J2J98_02065
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Entry
J2J98_02065 CDS
T07228
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00300
Lysine biosynthesis
rban01100
Metabolic pathways
rban01120
Microbial metabolism in diverse environments
rban01230
Biosynthesis of amino acids
Module
rban_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J2J98_02065 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rban01002
]
J2J98_02065 (dapE)
Enzymes [BR:
rban01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
J2J98_02065 (dapE)
Peptidases and inhibitors [BR:
rban01002
]
Metallo peptidases
Family M20
J2J98_02065 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QSY88973
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All DBs
Position
complement(421759..422952)
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AA seq
397 aa
AA seq
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MTATDPVANLQTLIRCPSVTPAEGGALTALEAMLAPLGFTVDKVTAREEGTADIENLYAR
LGKDGPHLMFAGHTDVVPVGDEAAWTHPPFAAEISKGELFGRGAVDMKGGIACFVAAVAR
HIEKNGPPAGSISFLITGDEEGPAINGTVKLLQWATERGERWDACLVGEPTNPDRLGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPVRGMLQLTQALMDPPFDGGTDDFQPSNLEV
TTVDVGNPATNVIPAKASASFNIRFNDSWSVETLRAEILRRLEAAAGNGQLRPGRKPVKY
DIVWADRPSHVFLTRNNALIASLSSAIENVAGRSPALSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVNERVAVSDLETLTAIYETFIDRWFAHAGS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctaccgatcccgtcgccaatctgcagacgctgattcgctgcccgtccgtcaca
cccgccgaaggcggtgcgctcacggcgctggaagcaatgcttgcgccgctcggcttcacg
gtcgacaaggtgacggcacgcgaagagggaacggccgacatcgaaaacctctatgcccgt
ctcggcaaggatggcccgcatctgatgtttgccggccataccgatgtcgtgccggtcggc
gacgaagccgcctggacgcatccgccttttgccgcggagatatcaaagggcgaactcttc
ggccgcggcgccgtcgacatgaagggcggcattgcctgcttcgtcgccgccgtcgcccgc
catatcgaaaagaacgggccgcctgccggctcgatttccttcctgattacgggcgacgaa
gaaggcccggcaatcaacggtacggtcaaactcctgcaatgggcgaccgaacgcggcgag
cgctgggacgcctgcctcgtgggagaaccgaccaatccggacaggctcggcgacatgatc
aagatcggccggcgcggctcgctgtcgggcaggatcaccgtgcatggcgttcagggccat
gccgcctatccgcaccttgccgacaatccggtgcgcggcatgctgcagctgacgcaggcg
ctgatggatccacccttcgacggcggcaccgacgatttccagccgtcgaacctcgaggtg
acgacggtcgatgtcggcaatcccgccaccaacgtcattccggcgaaggcatcggcaagc
ttcaacatccgcttcaacgacagctggagcgtcgaaacgctacgcgccgaaatcctgcga
cggctcgaagccgccgccggcaatggccagctgcgtccgggcaggaagccggtgaaatac
gatatcgtctgggccgaccggccgagccacgtcttcctgacgcgcaacaacgccttgatc
gcctcactgtcatcagccatcgaaaatgtggccggccggtcgccggcgctttcgaccacc
ggcggcacgtcggatgcgcggttcatcaaggactattgcccagtcgtcgaattcggcctg
gtcggtcagacgatgcacatggtcaacgagcgagtcgccgtatctgatctggagacgctg
acggcgatctacgagactttcatcgaccgctggttcgcccatgccgggtcttaa
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