KEGG   Rhizobium bangladeshense: J2J98_02645
Entry
J2J98_02645       CDS       T07228                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rban  Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:rban00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rban03400]
    J2J98_02645
Enzymes [BR:rban01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J2J98_02645
    5.6.2.6  RNA 3'-5' helicase
     J2J98_02645
DNA repair and recombination proteins [BR:rban03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J2J98_02645
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QSY89074
LinkDB
Position
540767..543271
AA seq 834 aa
MDQIDSDALLPAAFTRWFAEKGWRPRAHQLELLARAEAGQSTLLIAPTGAGKTLAGFLPS
LTDLTRRGRIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVLEMGLPVTIENRTGDTPN
AKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYVVLDELHSLVTSKRGHMLSLG
LARLRRLAPHLKTIGLSATVAEPMDLQKWLVAQEEGREHHAGLVVVEGGAKPDISILPTE
ERIPWAGHSAKYAIPDVYRQLLDHKTTLLFVNTRSQAEMLFQELWTINDDNLPIALHHGS
LDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRANH
RMDEPSKAILVPANRFEVMECRAALDANYIGAQDTPPVGRGALDVLAQHVLGMACAEPFD
MLELYDEITSASPYADLSWETFERVVDFVATGGYALRTYERYARIRKTKEGRWRVSNPAV
AQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQLSPGDTFVFSGKV
LRFEGIRENECLASQAFSLDPKIPSYNGGKFPLSTYLAEQVRAIIADPDRWCHLPDQVRD
WLSLQNDKSMLPKRDEFLIETFPRGSRGYMVAYPFEGRLAHQTLGMLLTRRLERAGAKPL
GFVATDYSLAVWGLEDMGLMIANGRLSLSDLFDEDMLGDDLEAWLDESFLLKRTFRNCAV
IAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDISRLGDM
LMRIRGHITHRPLDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEALA
NT seq 2505 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgacgccttgcttcctgccgcctttacccgctggtttgcggaa
aagggctggcgcccgcgcgcccatcagctggagctgctcgcgcgcgccgaggccggccaa
agcacgctgctgatcgcgccgaccggcgccggcaagacgcttgccggtttcctgccctcg
ctcaccgatctcacccgccgcggcaggatcccgcccggctccgccttcaccggcatccat
acgctctatgtctcgccgctgaaggcgctggcgatcgatatcgagcgcaacctgatgaag
cccgttctggaaatgggcctgcccgtcacgatagaaaaccgcaccggcgatacgccgaac
gccaagcgccagcgccagaagctcaacccgccggatattctgctgacaacgccggagcag
gtcgccttgcttctggcgaacagggaggcagagcgcttcttcaaggacctgaaatatgtc
gtcctcgacgagctgcattcgctcgtcacttccaagcgcggccacatgctttcgctcggc
cttgcccgtctgcgccgccttgctccccatctcaagaccatcggtctgtcggcgaccgtc
gctgagccgatggacctgcagaaatggctggtcgcccaggaggaggggagggagcatcat
gcggggcttgtcgtcgtggaaggcggcgccaaacccgatatttcgatcctgccgaccgag
gagcgcattccttgggccggccattccgccaaatatgccatccccgacgtctaccgccaa
cttcttgatcacaagacgacgctgcttttcgtcaatacccgcagccaagcggagatgttg
ttccaggaactctggacgatcaatgacgacaatctgccgatcgcgctccaccacggctcc
ctcgatgtcgcccagcgccgcaaggttgaggcagccatggctgaaaaccggctgcgtgcc
gtcgtcgccacctccacgctcgatctcggcatcgactggggcgatgtcgatctcgtcatc
catgtcggcgcgccgaagggggcctcgcgtcttgcccagcgcatcggccgcgccaatcac
cgcatggacgagccttcgaaggcaatcctcgtgccggccaaccgcttcgaggtgatggag
tgtcgggcagcgcttgacgccaattatatcggcgcccaggacacgccgcccgtcggccgc
ggcgcgctcgacgtgctcgcccagcacgtgctcggcatggcctgcgccgaacccttcgac
atgctggaactctatgatgaaatcaccagcgcctcgccctatgccgatctcagctgggag
accttcgagcgtgtcgtcgatttcgtcgcgaccggcggctatgcgctccggacctacgag
cgttacgcccgcatccgaaagaccaaggagggccgctggcgcgtctccaatcctgccgtc
gcccagcaataccgcctcaacctcggcaccatcgtcgaaagcccgatgctgaacatccgc
atggtcaagcgcggcgagggtggacggatcggccgtggcggcgccacgctggggaaggtc
gaggaatatttcctcgaacaattgtcgccgggcgatactttcgtcttctccggcaaggtg
ttgcgcttcgaaggcattcgggaaaatgaatgcctggcttcgcaggccttttcgctcgat
ccgaagatcccgtcctacaatggcggcaagtttccgctgtcgacctatcttgccgagcaa
gtgcgggcgataattgccgatcccgaccgctggtgccatctgccggatcaggtgcgcgac
tggctgtcgctgcagaacgacaagtcgatgctgccgaagcgtgacgagttcctgatcgaa
acgtttcctcgcggcagccgcggctatatggtcgcctatcccttcgaagggcgtctcgcc
caccagacgctcggcatgctgctgacccgccggctggagcgggccggtgccaagccgctt
ggcttcgtcgccaccgactattcgctcgccgtctggggcctcgaggatatggggctgatg
atcgccaatggtcgcctcagcctctccgacctcttcgacgaagacatgctcggcgacgac
ctcgaagcctggcttgacgaatccttcctgttgaagcgcaccttccgcaattgcgccgtg
attgcaggcttgatcgagcgtcgccatccgggcaaggagaagagcggccgccagatcacc
gtctcggccgacctgatctatgatgtgctgcgcagccatgagccggatcacatcctgctg
caggcgacgcgccaggatgcggcgacggggcttttggatataagccgtcttggcgatatg
ctgatgcgaatcaggggccacatcacccatcgccctctcgaccatatttccccgctcgcc
gtgccggtgatgctggagatcggacgagaggccgtacctggcgaggcccatgacgcgctt
ttggccgaggcggcggacgatctgatcgccgaggccttggcgtaa

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