Rhizobium bangladeshense: J2J98_02775
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Entry
J2J98_02775 CDS
T07228
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban03420
Nucleotide excision repair
rban03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J2J98_02775
03430 Mismatch repair
J2J98_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rban03400
]
J2J98_02775
Enzymes [BR:
rban01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2J98_02775
DNA repair and recombination proteins [BR:
rban03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J2J98_02775
MMR (mismatch excision repair)
Other MMR factors
J2J98_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
RecR_HhH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QSY89098
LinkDB
All DBs
Position
complement(572870..574930)
Genome browser
AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGSNAGVMADALSWSGTFHGIGARLLRDYAQQIGLD
ADFTIHDREDSADLMNLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALDQVLRDAFP
WCAAWEKQLRELFACYVEAKQAQNVLDYDDLLLYWAQMVGESVIAEDIGSRFDHVLVDEY
QDTNRLQASILLALKPQGQGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPAANIVTLDR
NYRSTQPILAAANAVIDLASERFTKNLWTERQSAERPRLVSVRDEAEQARYVADKVLDNR
EEGLKLKQQAVLFRTAHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMAEVASPLSALASMPAPPRSGEDWTAFVSMLQE
LKSGKAGWPAEIGLARQWYAPHLERLHEDAATRQADLLQLEQIAGGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTRVFMLNVVDGCIPNDLAVGTTAEIEEE
RRLLYVAMTRARDGLDLIVPQRFFTYGQNAQGDRHVYAARSRFIPATLLQFFEACSWPQV
KSEAAAQAQARQVRIDVGARMRGMWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccgcagcagcgcatggccgtggagcatggcacgctcacc
gacggcagccatattgccggaccgctgctggtcattgccggcgccggctccggcaagacg
aacacgctggcgcatcgggtcgcccacctgatcgtcaagggcgccgacccccgccgcatc
ctgctgatgaccttctcgcggagggctgccgccgagatggcgcggcgcgtcgagcgcatc
tgccgcgacgtgttgggttcgaatgccggcgttatggccgatgcgctgtcctggtccggc
accttccacggcatcggcgcgcggctgctgcgcgattatgcgcagcagatcggcctcgat
gctgatttcaccattcacgaccgggaagacagcgccgatctgatgaacctcatccggcac
gatctcggcttctcgaagacggaaagccgctttcccgccaagggcacatgccttgccatc
tattcccgggcggtgaattcggagaccgcgctcgaccaggtgctgcgcgacgcctttccc
tggtgcgcggcgtgggagaaacagctgcgcgagcttttcgcctgttatgtcgaggcgaag
caggctcagaacgtgctcgattacgacgacctgctgctctactgggcgcagatggtgggc
gagagcgtgatcgccgaggatatcggcagccgcttcgaccatgtgctcgtcgacgaatat
caggacacgaaccggctgcaggcctcgatcctcctggcgctgaagccccagggacagggg
ctgaccgtcgtcggcgacgatgcgcagtcgatctattccttccgggcggcgacggtgcgc
aatatccttgattttcccgccgccttcagcccggccgccaatatcgtcaccctcgatcgc
aactaccgctcgacgcagccgatcctggcggcggccaatgcggtgattgatctcgcctcg
gagcgcttcaccaagaatctctggacggagcggcagtcggcggagcggccgcgcctcgtt
tcggtgcgcgacgaggccgagcaggctcgttatgtcgccgacaaggtgctcgacaatcgc
gaggaaggcctcaagctcaagcagcaggctgtgctcttccgcaccgcccatcacagcggg
ccgctggaggtggaactgacccggcgcaacattcccttcgtcaagttcggcggcttgaag
tttctcgacagcgctcatgtgaaggacatgctggccgccctgcgctttgcgcagaatccg
cgcgaccgggtggcgggcttccggctgatgcagatcctgccgggcgtcggcccgtcgacg
gcgcagaaggcgctcgatctgatggcggaggttgcgagcccgttgtctgctctggcatct
atgccggcgccgccgcgctccggcgaggactggacggccttcgtttcgatgctgcaggag
ctgaaatccggcaaggccggttggccggcggaaatcgggctggcgcggcaatggtatgcg
ccgcatctggaacggctgcatgaagatgcggccacgcggcaggccgatctgctgcagctc
gaacagatcgccgggggttatgcctcacgcgagcgtttcctcaccgagctcaccctcgat
ccgccggatgcgaccagcgaccaggcgggcgtaccgcttcttgacgaggactatctcatt
ctgtcgaccattcattccgccaagggccaggaatggacacgggtcttcatgctgaacgtc
gtcgacggctgcattccaaacgatctcgccgtcggcaccaccgccgagatcgaggaggag
cgtcgcctgctctatgtggcgatgacgcgcgcccgcgacggtctcgatctcatcgtgccg
caacgcttcttcacttacggacagaatgcgcagggcgaccggcacgtctatgccgcgcgc
agccgtttcattccggcgacgctgctgcagttcttcgaggcctgcagctggccgcaggtg
aaatcggaagccgccgctcaagcgcaagcgcgccaggtgcgcatcgacgtcggcgcccgc
atgcgcggcatgtggcgatag
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