Rhizobium bangladeshense: J2J98_03605
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Entry
J2J98_03605 CDS
T07228
Name
(GenBank) PAS domain S-box protein
Organism
rban
Rhizobium bangladeshense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS
PAS_9
PAS_4
HATPase_c_3
Diguanyl_cycl_sensor
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QSY89253
LinkDB
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Position
complement(745853..749677)
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AA seq
1274 aa
AA seq
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MPAVQYPFIDIAVHARVRERFSRGEAMVLLSADLARLLWANGAGAELFGHSAVYDLLDQG
VDRTDITFRQLETAARQLADVGDNRSLMIRIAKGFQRVQVQATAELIRLSSGEKAILFSV
PVSAKPLTAGAAATRMLQGLDDPDTHMAVIGANGEVIAASPGFASLAISVETAKALINLA
GAHPDRLVKRPVATGRGYLPAAVGRLSDEPALNLLFAVETAIGHLDPIDAPVLDAVDAPA
QAADAAAGEESTPLSELPPEEAAAANGFSEMVDAVSGIEEVEETLEEIVDESARPTAATA
TSAEAPVGERNPAEDETPENDGRANESSVNEAYEAEEHVDAAAIYSANETAEATAMAETP
AEAGQMPVDEAPETVPEEPATAASGASPAPSLAPEPGFVFRPNSRATRFVWKIDAEGRFN
EVSHEFAEAVGPHASAIIGSAFSDIAALFNLDPDGKLSEALARRDTWSGKTILWPVEGTS
LVVPVDLAALPTYTRNRDFDGFRGFGVVRLSDAQEDPLALGLTLGPNGIGHDAASLGPAS
ETVTDPTHDAQAPEAVLAETTAADEVEDQTPAAAAPTEETSPEATVEEAGFEPPALESAA
EEPRDGVNAGAGEAAPADAADEPPALRVAETPNRRSTDKIVQLHSTGAALTAAEQANFRE
IAKRLEAFGARREEPDTPAPAGTTATETASFEEIAEPQTFTGEAPVADSADTASLDEIAP
QEAIFENAAEAVREDGATEEPTAIAEDEATEGLEETVSQIEVLTSFIPPRVKMTDGLSAG
TVDQLPVAVLIHVGDALIHANPEFMRLTGYQSLDALREVGGIEALLQRRDLEEKAAGSGT
MMLVKADDTLTPVTARLQSVRWEDANALMLALMPVEGKEDVRGESNRAEARPERMVEKVA
KLQVEVEELRSILETATDGVVVIGTEGDIRSMNRSASALFNYDEQETRGKPFVMLFAHES
QKAVLDYLNGLSGHGVASVLNDGREVIGREAGGGFVPLFMTMGRLTSSNGYCAVIRDITQ
WKRTEEELRNAKGAAETANAHKTDFLARVSHEIRTPLNAIIGFSDMMAGERFGPIGHPRY
IEYANDIGRSGRHVLDIVNDLLDISKIEAGEMDLDFAAVGLNEAISEAVALVQPQANGQR
VIIRTALSHSVPDVVADLRSIKQIALNILSNAIRFTPSGGQIVVSTSYEANGSVVLRVRD
TGIGMTRAELDHAMKPFRQVSSTQSRHRGDGTGLGLPLTKAMVDANRATFSINSAPNEGT
LVEITFPSQRVLAG
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtccaatacccgttcatcgatatcgccgtgcatgcgcgggtgcgggaacga
ttttcacgcggcgaggcgatggtcctgctttcggccgatcttgcccgcctgctttgggca
aacggtgcgggtgctgagcttttcggccattcagcagtctacgatctgctcgaccagggc
gtcgatcgcaccgatatcaccttccgccaactggaaacggcggcgcgtcagcttgccgac
gtcggcgacaacagaagcctgatgatccgtatcgcaaagggctttcagcgcgtgcaggtg
caggcgacggccgaactgatccggctttcatcgggcgagaaagccattctgttttcagtg
ccggtgtcggcaaagccgctgacggcaggcgctgcggcgacccggatgctgcagggtctc
gatgatcccgacacgcatatggctgtcatcggcgccaatggcgaggtcatcgccgcctcg
cctggctttgcctcgctcgccatttcagtcgagaccgcaaaggccttgatcaaccttgcc
ggcgcccatcccgaccgcctggtgaagcgcccggtcgccaccggcaggggttatctcccg
gcagcggtcggcaggctgagcgacgagccggcgctcaatctgctctttgccgtggagacc
gcgatcggtcatctcgacccgatcgacgcgcccgtgctcgacgcagtcgatgcaccggcg
caggcggctgatgcggctgcgggcgaagaaagcacaccgctctccgaacttcctccggaa
gaggcggctgcggcgaacggattcagcgagatggtcgacgcggtctctgggatcgaggag
gtcgaggagacgctggaggagatcgtcgacgaaagcgcccggccgaccgcggcaactgcc
acatccgcagaggcaccggttggggagaggaatccggccgaagacgaaacgccggagaac
gacgggcgcgcgaacgagagcagcgtgaatgaggcctacgaggccgaggagcacgtcgac
gccgccgcgatatactccgccaacgagacggcggaagcgaccgcgatggcggagacacct
gccgaagccggccaaatgccggtcgatgaggcgccggaaaccgttcccgaagagcccgcc
accgcagcttcaggcgcctcccctgccccgtcgcttgcgcccgaacccggtttcgtcttc
aggccgaacagccgcgccacgcgcttcgtctggaagatcgacgcggaaggccggttcaac
gaggtcagccacgaatttgccgaggctgtcggtccgcatgcatccgccatcatcggctcc
gccttcagcgatattgccgcccttttcaatctcgaccctgacggcaagctttcggaggca
ctcgcccgccgcgacacgtggtcgggcaagacgatcctctggccggtcgaaggcaccagc
ctcgtcgttcctgtcgatctcgctgcgctaccgacctacacccgcaaccgcgacttcgac
ggtttccgcggcttcggcgtcgtcaggctctccgatgcgcaggaagatccgctggcgctc
ggcctgacgctcggtccgaacggcataggccatgatgcggcaagcctcggccccgcatcc
gaaactgtcaccgacccgacccacgatgctcaagcgcccgaagcggtcctggcggaaacg
acagccgccgacgaggtcgaggaccagacgccggctgcagccgccccgaccgaagagaca
tcccccgaagccaccgtggaagaggccggcttcgagccgcccgccttggaaagcgccgcc
gaagaaccgcgggacggcgtcaacgccggcgcgggtgaagcggccccggccgatgccgca
gacgagcccccggcgcttcgcgtcgcggaaacccctaatcgccgttccaccgacaagatc
gtgcagcttcacagcacaggcgccgcattgacggccgctgagcaggcgaacttccgcgaa
atcgccaagcgcctggaagccttcggcgcccgcagggaagagcctgacaccccggcaccg
gcgggcaccaccgccaccgaaacggcgtctttcgaagaaatcgcggaaccgcaaaccttc
acaggcgaagcgccagtcgccgatagcgccgacacagcttcgctcgatgagatagcgccg
caggaagcgatcttcgagaacgcggccgaggcggtgcgcgaagacggcgccactgaagag
cccaccgccatcgccgaggacgaggcgacggaagggctcgaggagacggtcagccagatc
gaggttctcacaagtttcatcccgccgcgcgtgaagatgaccgatgggctttcggccgga
acggtcgaccaattgcccgtcgcagtccttatccacgtcggcgatgcgctgatccatgcc
aaccctgaattcatgcggctgacgggttaccaatcgctcgacgcgctgcgcgaagtgggc
gggatcgaagccctgctgcagcgccgcgaccttgaggaaaaggcggccggttccggcacc
atgatgctcgtcaaggccgacgacacgctgacgcccgtaaccgcgcgactgcaatcggtg
cgctgggaagatgccaatgcgctgatgctggcgctcatgcctgtagaaggcaaggaggat
gtccgcggcgaaagcaaccgtgccgaggcgcgtccggagcggatggtcgagaaggtcgcc
aagcttcaggtcgaggtcgaggaattgcgctcgatcctggaaacggcgaccgacggcgtc
gtcgtcatcggcacggagggcgacattcgttcgatgaaccggtcggcgagcgccctgttc
aattacgacgagcaggagacgcgtggcaaaccctttgtcatgctgtttgctcatgagagc
cagaaagcagttctcgactatctgaacgggctctccggccacggcgtggcaagcgttctg
aacgacgggcgcgaggtgatcggccgcgaggccggcggcggcttcgtgccgcttttcatg
acgatgggccggcttacctcgtcgaacggctattgcgccgtcatccgcgatatcacccag
tggaaacgcaccgaggaagagctgcgcaacgccaagggcgcggccgagaccgccaacgcc
cataagaccgatttcctcgcccgcgtcagccatgaaatccgcacgccgctaaacgccatc
atcggcttttccgacatgatggccggcgagcgtttcggtccgatcggccatccccgttac
atcgaatatgccaacgatatcggtcgctccggccgacacgtgctggatatcgtcaacgat
ctcctcgacatttcgaagatcgaggcgggcgagatggatctcgactttgccgccgtcggc
ctcaacgaggcgatctcggaggccgtcgccctcgtccagccgcaggcgaatggccagcgc
gtcatcatccgcacggcgctgtcgcattcggtgccagacgtcgtggccgatctgcgttcg
atcaagcagatcgcgctcaacatcctgtcgaatgccatccgcttcacgccctctggcggt
cagatcgtcgtttccacctcctacgaggcgaatggcagcgtcgtgttgagggttcgcgat
accggcatcggcatgacgcgcgccgaactcgaccatgcgatgaagccgttccgtcaggtt
tcctcgacccagtcacgccatcgcggcgacggcaccgggctcggcctgcccttgaccaaa
gcgatggtggatgccaaccgggcgacattctcgatcaattcggccccgaacgaaggcacg
ctcgtcgagatcaccttcccgtcgcagcgcgtgctggctggctga
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