Rhizobium bangladeshense: J2J98_04090
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Entry
J2J98_04090 CDS
T07228
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rban03009
]
J2J98_04090
Enzymes [BR:
rban01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
J2J98_04090
Ribosome biogenesis [BR:
rban03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J2J98_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QSY89342
LinkDB
All DBs
Position
851194..853098
Genome browser
AA seq
634 aa
AA seq
DB search
MTLKDKPKRPGGKPLSRDIRPKAGPKAGGAKPAKVSAARPAAAETDSETKAERISKVMAR
AGVASRRDIERMIMEGRVTLNGTVLETPVVNVTLADRIEVDGVPIRGIERTRLWLYHKPA
GLVTTNADPEGRPTVFDSLPEELPRVMSIGRLDINTEGLLLLTNDGGLARALELPATGWL
RRYRVRAHGEIDQEALDKLRDGIAVDGVLYGSIEATLDRTQGSNVWITMGLREGKNREIK
NVLGALGLDVNRLIRISYGPFQLGDLPEGHVVEVRGRTLRDQLGPRLIEEAKANFEAPIY
NAPPVAAEEEEEVAAPEKRERPRRQEDKRERALSRLDTKRDDRHGGRRDDDRRDGGRRDD
DKPKRPQPLGQRRSTNVWMAPGARPLGEKAAAKAAKNAQTARRRGEQPAAKNNAFDRIED
RPRTPINRVREEDGEWIRSSEQPRRKDEDEGFGRKRGFGDRPAREDRGFGDRPSRGDRPF
GDKPRGDRKPRADGDERPRAARASTGEGRSERPRSERPFGDRPSRGDRTFAGKPRGDRKP
REEGDERPRAARSFAGEGRSERPRGERSFGDKPSSDKPRGKSFAGKPGGPKKFSGKPKSG
KPGGDRPGGDRPAGGPSRGGARGKGMARGADRRR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaaagacaagccaaaacgcccgggcggcaagcccctttcacgggatatcagg
ccgaaggccggtccgaaggcgggcggcgcgaagccggcgaaggtttcagccgcgcgcccg
gcagcggctgaaaccgacagcgagaccaaggccgaacgcatttcaaaggtgatggcgcgc
gcaggcgttgcctcccgccgggacatcgagcgcatgatcatggaaggccgtgtgacgctg
aacggcacggttctcgaaactcccgtcgtcaacgtcacgctggccgatcgcatcgaggtg
gacggcgtgccgatccgcggcatcgagcgcaccaggctctggctctatcacaagccggcg
gggctggtgactacaaatgccgatccggaaggccgtccgaccgtcttcgacagcctgccg
gaagaactgccgcgcgtcatgtcgatcggccgtctcgatatcaacaccgaaggtctgctg
ctgctcaccaatgacggcggtctcgcccgcgccctcgaactgccggcgaccggctggctg
aggcgctatcgcgtccgcgctcatggtgagatcgatcaggaggcgctcgacaagctgagg
gacggcatcgccgtcgacggcgtgctctacggctcgatcgaggcgacgctcgaccggact
caaggctcgaacgtctggatcaccatgggccttcgcgaaggcaagaaccgtgaaatcaag
aacgtgctcggcgccctcggcctcgacgtcaaccgtctgatccgtatctcctatgggccg
ttccagctcggcgacttgcccgaaggccatgtcgtcgaggtgcgcggccgcacattgcgt
gaccagctcggcccgcgcctgatcgaggaagccaaggcgaatttcgaggcgccgatctac
aacgcaccgcctgtcgccgccgaggaagaggaagaagtcgcggcgccggaaaagcgcgaa
cggccgcgtcgccaggaggacaagcgcgaacgagcgctaagccgcctcgacaccaaacgt
gacgaccgccacggcgggcgcagagacgacgatcgccgcgacggcggccgcagggacgac
gacaagccgaagcgtccgcagccgctcggtcagcgccgcagcaccaatgtctggatggcg
ccgggcgcccggccgctcggcgaaaaggcggctgccaaggccgccaagaatgcgcagacc
gcgcgccggcgcggcgagcagccggcggcaaagaacaatgctttcgatcgcatcgaggat
cgtccgcgcacgccgatcaaccgcgtgcgcgaagaggacggcgaatggatccgctctagc
gagcagcctcgccgcaaggatgaggacgaaggctttggccgcaagcgcggcttcggtgac
cgtcctgctcgcgaagaccgcggtttcggcgatcgtccttcgcgcggcgaccggcctttt
ggcgacaagccgcgtggtgatcgcaagccgcgtgccgatggtgatgagcgtcctcgcgcc
gccagagcttccaccggcgagggccggtctgagcgtccgcgcagcgaacgccccttcggc
gatcgtccgtcgcgtggcgatcgaactttcgccggcaagccgcgtggcgatcgaaagccg
cgcgaggagggtgacgagcgcccgcgggcagccagaagctttgccggcgagggccgctcc
gagcgtccgcgcggagagaggtccttcggagacaagccttcgagtgacaagccccgcggc
aagagctttgccggcaagcccggcggccccaagaaattttccggcaagccgaagagtggc
aagccgggcggtgacaggccgggcggtgacaggcctgcgggcggcccgtcccgaggtggt
gctagaggaaagggaatggcgcgcggtgcggatcgtcggcggtga
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