Rhizobium bangladeshense: J2J98_06860
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Entry
J2J98_06860 CDS
T07228
Name
(GenBank) DUF4082 domain-containing protein
Organism
rban
Rhizobium bangladeshense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
He_PIG
Cadherin_4
Big_9
Big_7
Mo-co_dimer
HNF-1A_C
Motif
Other DBs
NCBI-ProteinID:
QSY89855
LinkDB
All DBs
Position
1412202..1419233
Genome browser
AA seq
2343 aa
AA seq
DB search
MYRNARRWTSRSLLLDSLMPRWLSVGGKGKPRKPAERRKDSAQLAASAQSAEANKHGNLV
ANPDHDAALGEHDAGQRAGVIGGADAPADIDRAAPSLPYAFKTIGEKGVRGGDVAASVLS
AHMPDFARFQGRADGVAFGAESSLQRTYPGMSAIGDDPLAPYLPQSPAPTASGQDSAAAI
GALAHSGKVVILESTPSTQATAHEAGASSLAFGMPFGVCGCGYFTSPVRMLDWAHGGAML
QPDGQLPGTRLTEGPDFVSTIKRAIGASISDPLLDRDLSPLSGWRGTASWRESTVLTGSL
PGGGETGTGSAKSKGIGILSGSVTMPPSPQQRSLTTQNLAAAAAANNIIVLENQKQGNPE
SEWGIDGAGSSNIEGFATDISVDNGKTISFKINTNSTNYRIDIYRLGYYGGMGARKVHTI
QHTGLQTQPTPLRNASTGTVDAGNWAVSASWTVPEDAVSGVYIAKLVRQDGTSGQNHIPF
IVRDDDSRSDIVFQTADQTWQAYNGWGGANFYGGNGPATGQGAGRAYAVSYNRPIATRGG
VGTVAGPQDYLFGAEYAGIYWLEQNGYDVSYLSGVDVDRYGSLLLNHKAYIDAGHDEYWS
GQQRANVEAARDAGVNLQFWSGNEVYWRTRWGNAYSADATPYRTLISYKETWSPGASIDP
SNEWTGTFRDPRLSPPAVGGGNPENSLTGQLFQVDDVGSNLQAITIPYDDANLRFWRNTS
VANLQPGQTATLTKNYLGYEWDEAPDNGFDPAGLVKLSSTTVPVSTYLLDYGNTTGNGVS
THNLTLYRAPSGALVFGAGTVYWTWGLSDNHDLTATPTDPRVQQAMVNLLADMGIQPGTL
QSGLVAATASSDQVAPTSVITVPATATVGSTVTITGTAADTGGGVVAGVEVSTDNGASWH
PATGDENWTYRWSPQAVGSYTILSRAVDDSINLEAPSAGRTVTVSGPSYTSLFGAATPAV
VNTNDTSAVELGVRFQTSVAGTVSGIRFYKGSQDTGTHTGSLWSSTGTRIATLTFANETA
SGWQTAYFSSPVALTPGQTYTASYHTNVGRYSTTTNYFVSNVTSGPLTAPASGNGVYRYG
NNSLYPTASFSATNYWVDVMFNPSSSNTTPTAVADAGDATEKGGVANGSGGVLASGNVLT
NDTDPDAGDTKTVTAVRFGTTSGTLGAALNGTYGSLVLNASGAYSYAVNESNAAVQALRQ
STNTLSDVFSYTMRDTAGATATANLTITIHGANDAPVLAVQTAGQNATVGSAFSFTLPTT
TFSDVDSGDTLTYAATAADGTALPSWLTFNASTRTFSGTPTATGTYGVRVTATDLGGLAA
NETFNIAVSTSGNTAPTAVADAGDATEKGGVANGSGGVAASGNVLTNDTDPDAGDTKTVT
AVSFGATSGTLGAALSGAYGSLVLNASGAYSYAVNESNAAVQALRQSTNTLSDVFSYTMR
DAAGAIATANLTITIHGANDAPVLAVQTATQNATVGSAFSFTLPTTTFTDVDSGDTLAYA
ATAADGTALPSWLSFNASTRTFSGTPTAAGTYGVRVTATDLGGLAANETFNITATVAPAT
YSLFNASSTPAQTNLNDGQQLELGVKFQSNVAGDVTAIKFYRSANDNGQNVVDLWTSTGT
RLATATFSNTTASGWQTVNFATPVTIAANTTYVASYHTTGAYVATNNFYTAAVTNGPLTA
PSSAAAGGNGVYRYGGSATTGIFPNATYNAANYFADVVFRPSSPNTTPTAVADAGDATEK
GGVANGSGGVVASGNVLTNDTDPDAGDTKTVTAVRFGTTSGTLGAALNGTYGSLVLNASG
AYSYAVNESNAAVQALRQSTNTLSDVFSYTMRDTSGATATANLTITIHGANDAPVLAVQT
AGQNATVGSAFSFTLPTTTFSDVDSGDTLTYAATAADGTALPSWLTFNASTRTFSGTPTA
TGTYGVRVTATDLGGLAANETFNIAVSTSGNTAPTAVADAGDATEKGGVANGSGGVAASG
NVLTNDTDPDAGDTKTVTAVSFGATSGTLGAALSGAYGSLVLNASGAYSYAVNESNAAVQ
ALRQSTNTLSDVFSYTMRDAAGAIATANLTITIHGANDAPVLAVQTATQNATVGSAFSFT
LPTTTFTDVDSGDTLAYAATAADGTALPSWLSFNASTRTFSGTPTAAGTYGVRVTATDLG
GLAANETFNITATVAPATYSLFNASSTPAQTNLNDGQQLELGVKFQSNVAGDVTAIKFYR
SANDNGQNVVDLWTSTGTRLATATFSNTTASGWQTVNFATPVTIAANTTYVASYHTTGAY
VATNRFFTNGVSNGPLTAPSSAAAGGNGVYAYGGSATTGLFPTSTYDSANYYADVVFRPQ
LAS
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaacgctcgccggtggacctcgcgctcacttctgctggattcgttgatgccc
cggtggttgagcgtcggcggaaagggaaaaccgcgcaagcctgccgaaaggcgtaaggat
agtgctcaacttgcggcatccgcgcagagcgcggaagcaaacaagcacggtaatctcgtc
gccaatcccgatcatgatgcggcgctcggcgagcatgatgctggacagagagcgggggtg
atcggcggcgcggacgctccggccgacattgaccgcgcagcaccgtccttgccctatgct
ttcaaaacgattggcgaaaagggagttcgaggcggtgatgtcgccgcgtctgtgctatca
gctcatatgccggattttgcgcggttccaggggcgcgcggatggagttgctttcggggct
gagtcgtcccttcagcgcacctaccctggaatgagcgccatcggtgatgatccgctggct
ccctatctgccgcaaagccctgcaccgacagcctccgggcaagattctgcagcggcgatc
ggggcgcttgcgcactcgggcaaggtcgtcattctcgaatcgacaccgtcaacgcaggcg
actgcgcatgaagccggcgccagttcactggcgtttggcatgccctttggtgtctgcgga
tgcggctattttacctcgcccgtgcggatgctcgattgggctcacggcggcgccatgctt
cagccggacggccaactgccgggaaccaggctgaccgaggggccggactttgtatcgacg
atcaagcgtgccatcggtgcctcgatcagcgacccgcttctcgatcgtgatttatcccct
ctctcgggctggcgcggaaccgcaagctggcgggaatcaacggtcctcaccggatcgttg
ccaggcggcggagagaccggaacgggctccgccaaatcgaagggcatcggcatcctttcc
ggctcagtgacgatgccgccttccccacagcagcggtcgctgacaacgcaaaatctggcg
gccgcggcggcggccaacaacataatcgtgctggaaaaccagaagcagggcaacccggag
agcgagtggggcatcgacggtgctggcagctccaacatcgagggttttgcgaccgacatc
agcgtcgataacggcaagacgatcagcttcaagatcaatacgaattccaccaattatcgg
atcgatatctataggctcggctattacggcggcatgggcgcccgcaaggtccacaccatt
cagcacaccggattgcagacgcagcccactccgctgcgcaacgcctcgaccggcacggtg
gatgccggcaattgggcagtctcggcgtcgtggactgtaccagaggacgcggtctcaggc
gtctatatcgccaagctggtgcgtcaggatggcacctccggccaaaatcatatcccgttc
atcgtgcgtgacgacgacagccgcagcgacatcgtcttccagaccgcagatcagacctgg
caagcttataacggctggggtggcgcaaacttctatggcggcaacggaccggcgacgggg
cagggagctggccgtgcctatgcagtcagctacaacagaccgatcgcgacccgcggtggc
gtgggaaccgttgctggcccgcaggactatctcttcggcgccgaatacgcaggcatctat
tggctggagcagaacggctacgatgtctcgtatctatcgggtgtggacgtcgaccgctac
ggcagcctgttgctcaatcacaaagcctatatcgatgccgggcatgacgaatactggtcg
ggccagcaacgcgccaatgtcgaagccgcccgtgacgcgggggttaacctgcagttctgg
agcggcaacgaggtctattggcgcacccgctggggcaatgcctatagcgccgatgccacg
ccttaccgcacgctgatctcctataaggagacctggtcgccgggcgccagcatcgaccct
tccaacgaatggacaggtactttccgtgatccgcgcctcagcccacccgctgtcggcggc
ggtaatccggaaaactcactgactgggcagctgttccaggttgacgacgtcggcagcaat
ctccaggcgatcactattccctatgacgatgccaatttgcgtttctggcgcaatacgagc
gtcgccaatcttcagcccggccagacggcgacgctcaccaagaactatcttggttacgag
tgggacgaagcccccgacaacggcttcgatccggccggcctagtcaagctgtcttcgacg
acggttcctgtaagcacctacctgctcgactatggcaacaccaccggcaatggcgtctcg
acccataatttgacgctctatcgcgctccgagcggagcgctggtgttcggtgccggtacc
gtctactggacatggggcctgagcgacaatcacgacctcacggcgactccgacggacccg
cgcgtgcagcaggcaatggtcaacttgcttgccgatatgggcattcagcccgggacgctg
caatccgggctggtcgccgcgacggcttcgtcggaccaggttgcgccgacctccgtcata
acggtgccagcaacggcgaccgtcggatccaccgttacgattacaggcaccgctgccgac
acgggcggcggggtggtcgccggcgtcgaggtttccaccgacaatggcgcaagctggcat
ccagcgacaggcgatgagaactggacctatcgctggtcgccgcaggccgtcggtagctat
acgatcctgtcccgtgccgtagacgacagcatcaatctcgaagcaccctcggctggtcgc
acggttaccgtcagtgggccaagctacacgtctctcttcggcgcggcgactccggccgtc
gtcaatacaaacgatacgtcagccgtcgaactcggggtccgcttccaaacctctgtggct
gggactgtcagcggcattcgcttttacaagggaagtcaggacaccggtacgcatacaggt
tcactctggtctagcaccggcacgcggatcgcgactctcacctttgccaacgagaccgcc
agcggctggcagaccgcgtatttttccagtcctgtggctttgacgcccggacagacctac
acggcgtcgtaccacacgaatgtcggtcgttactcgacaaccaccaactatttcgtctcg
aacgtaacgagtgggccgctgacggcaccggcgagcggtaatggcgtatatagatacggt
aacaacagcctgtatcctactgccagcttcagcgcgacgaattactgggtcgacgtgatg
ttcaatccctcgtcctcgaacacgacgccgacggcagttgccgatgccggggatgcgacg
gagaagggcggcgttgccaacggctcgggcggcgtgttggccagcggcaacgtcttgacc
aacgacaccgatccggatgccggcgacaccaagacggtgacggcggtccgcttcggcacg
acatcaggcacgctcggcgcagcgctgaacggcacctatggcagtctggtgctcaatgca
tcgggcgcctatagctatgccgtcaacgagtccaatgccgccgtgcaggcgctgcgccag
tcgaccaacacgctgagcgacgtcttcagctatacgatgcgcgatactgccggcgccacc
gccacggcaaacctcaccatcaccatccacggcgccaacgacgcgccggtgctcgccgtc
cagacggctggccagaacgccaccgtcggctccgccttctccttcacgctgccgacgacc
accttcagcgatgtcgacagcggcgacacgctgacctatgcggcaaccgctgccgatggc
acggcgctgccctcttggctcaccttcaatgcctcgacgcgcaccttcagcggcacgccg
acggcaaccggcacctatggcgtccgggtgacggcgaccgatctcggcggcctcgccgcc
aacgagaccttcaatatcgccgtgtcgacatcaggcaacacggcgccgacggcggttgcc
gatgccggggatgcgaccgagaagggcggcgttgccaacggctccggcggtgttgcggcc
agcggcaacgtcttgaccaacgacaccgatccggatgccggcgacaccaagacggtgacg
gcggtcagcttcggggcgacgtcaggcacgctcggcgcagcgctcagcggcgcctatggc
agtctcgtgctcaacgcatcaggcgcctatagctatgccgtcaacgagtccaatgccgcc
gtgcaggcgctgcgccagtcgaccaacactctgagtgatgtcttcagctacacgatgcgc
gacgctgccggcgccatcgccacggcaaacctcaccatcaccatccatggcgccaatgac
gcgccggtgctcgccgtccagacggcgacccagaacgccaccgtcggctctgccttctcc
ttcacgctgccgacgaccaccttcaccgatgtcgacagcggcgacacgctggcctatgcg
gcaaccgccgccgacggcacggcgctgccctcttggctgagcttcaacgcctcgacgcgc
accttcagcggcacgccgacggcagccggaacctacggcgtcagggtcacggcgaccgat
ctcggcggcctcgccgccaacgagaccttcaatatcactgcgacagtggcgccggcgacc
tacagcctgttcaacgcttccagcacaccggcccagacgaacctcaacgacgggcagcag
ctcgagctcggcgtcaagttccagtcgaacgtcgccggtgatgtcaccgccattaagttc
taccgcagcgccaacgacaacggtcaaaacgtcgtcgacctgtggacttccaccggcacc
aggctcgccaccgccaccttcagcaacaccacggcgagcggctggcagacggtgaacttt
gcaacacccgtcaccatcgccgccaacacaacctatgtcgcctcctaccacacaacaggc
gcctacgtggcgaccaacaatttttatacggccgcagtcaccaacggtccgttgacggct
ccgtcgagtgccgccgccggcggcaacggcgtctaccgttatggcggatccgccaccaca
ggcattttcccgaatgccacctataatgctgccaactattttgctgatgtggttttccgt
ccctcgtccccgaacacgacgccgacggcagttgccgatgccggggatgcgacggagaag
ggcggcgttgccaacggctcgggcggcgtggtggccagcggcaacgtcttgaccaacgac
accgatccggatgccggcgacaccaagacggtgacggcggtccgcttcggcacgacatcg
ggcacgctcggcgcagcgctgaacggcacctatggcagtctggtgctcaatgcatcgggc
gcctatagctatgccgtcaacgagtccaatgccgccgtgcaggcgctgcgccagtcgacc
aacacgctgagcgatgtcttcagctacacgatgcgtgacacttcaggcgctaccgccacg
gcaaacctcaccatcaccatccacggcgccaacgacgcgccggtgctcgccgtccagacg
gctggccagaacgccaccgtcggctccgccttctccttcacgctgccgacgaccaccttc
agcgatgtcgacagcggcgacacgctgacctatgcggcaaccgctgccgatggcacggcg
ctgccctcttggctcaccttcaatgcctcgacgcgcaccttcagcggcacgccgacggca
accggcacctatggcgtccgggtgacggcgaccgatctcggcggcctcgccgccaacgag
accttcaatatcgccgtgtcgacatcaggcaacacggcgccgacggcggttgccgatgcc
ggggatgcgaccgagaagggcggcgttgccaacggctccggcggtgttgcggccagcggc
aacgtcttgaccaacgacaccgatccggatgccggcgacaccaagacggtgacggcggtc
agcttcggggcgacgtcaggcacgctcggcgcagcgctcagcggcgcctatggcagtctc
gtgctcaacgcatcaggcgcctatagctatgccgtcaacgagtccaatgccgccgtgcag
gcgctgcgccagtcgaccaacactctgagtgatgtcttcagctacacgatgcgcgacgct
gccggcgccatcgccacggcaaacctcaccatcaccatccatggcgccaatgacgcgccg
gtgctcgccgtccagacggcgacccagaacgccaccgtcggctctgccttctccttcacg
ctgccgacgaccaccttcaccgatgtcgacagcggcgacacgctggcctatgcggcaacc
gccgccgacggcacggcgctgccctcttggctgagcttcaacgcctcgacgcgcaccttc
agcggcacgccgacggcagccggaacctacggcgtcagggtcacggcgaccgatctcggc
ggcctcgccgccaacgagaccttcaatatcactgcgacagtggcgccggcgacctacagc
ctgttcaacgcttccagcacaccggcccagacgaacctcaacgacgggcagcagctcgag
ctcggcgtcaagttccagtcgaacgtcgccggtgatgtcaccgccattaagttctaccgc
agcgccaacgacaacggtcaaaacgtcgtcgacctgtggacttccaccggcaccaggctc
gccaccgccaccttcagcaacaccacggcgagcggctggcagacggtgaactttgcaaca
cccgtcaccatcgccgccaacacaacctatgtcgcctcctaccacacaacaggcgcctac
gtggcgaccaacagattcttcacgaatggtgtctcgaacggcccgttgacggctccgtcg
agtgcggctgccggcggcaatggcgtctacgcctatggcggatccgcaacaacgggcctc
ttcccgaccagcacctacgattcggcaaattactatgccgatgtggtcttccgaccgcag
cttgcttcgtga
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