Rhizobium bangladeshense: J2J98_07555
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Entry
J2J98_07555 CDS
T07228
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00521
Streptomycin biosynthesis
rban00523
Polyketide sugar unit biosynthesis
rban00541
Biosynthesis of various nucleotide sugars
rban01100
Metabolic pathways
rban01110
Biosynthesis of secondary metabolites
rban01250
Biosynthesis of nucleotide sugars
Module
rban_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J2J98_07555 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J2J98_07555 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J2J98_07555 (rfbC)
Enzymes [BR:
rban01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
J2J98_07555 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSY89985
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Position
complement(1563241..1563819)
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AA seq
192 aa
AA seq
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MHIETATIEGIVAITPPRFGDHRGYFCEVFKDAWFRENVADVTFIQDNESLSAQAGTVRG
LHFQIPPFAQGKLVRCLAGRIMDVVVDIREGSPSFGKWLSQELSPETGKQLWIPAGFAHG
FATIEPNSVISYKVTAPYSPQHDRGIAWNDPMIGIRWPFDERDMVSSDKDKTLPRLADLP
SHFSYTAQQPRD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgagaccgcgaccatcgagggcattgtcgcaatcacgccgccacgtttcggc
gatcaccgcggctacttctgcgaagtattcaaggatgcctggttccgggaaaatgtggcc
gacgtcacgttcatccaggacaacgaatcgctttcagcgcaggctggaaccgtccggggg
ctgcatttccagatcccacccttcgcacagggcaagctggtgcgctgccttgccggccgg
atcatggatgtcgtcgtcgatattcgcgagggatcgccgagcttcggcaaatggctctct
caggagctctcgccggaaaccggcaaacagctctggataccggccggtttcgcacacgga
ttcgcaacgatcgagccgaacagcgtcatcagctacaaggtaaccgcaccctacagcccg
cagcatgatcggggcatcgcgtggaacgatccgatgatcggcattcgctggcccttcgat
gagagagacatggtgtcgtccgacaaggacaagacgctgccgcggctcgccgatctgcca
agccatttttcctatacagcacagcaacccagggattga
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