Rhizobium bangladeshense: J2J98_07905
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Entry
J2J98_07905 CDS
T07228
Symbol
hupB
Name
(GenBank) DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rban03032
]
J2J98_07905 (hupB)
03036 Chromosome and associated proteins [BR:
rban03036
]
J2J98_07905 (hupB)
03400 DNA repair and recombination proteins [BR:
rban03400
]
J2J98_07905 (hupB)
DNA replication proteins [BR:
rban03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J2J98_07905 (hupB)
Chromosome and associated proteins [BR:
rban03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J2J98_07905 (hupB)
DNA repair and recombination proteins [BR:
rban03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J2J98_07905 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QSY90049
LinkDB
All DBs
Position
1639915..1640190
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKSDAASAVDAVFDVVQAELKNKGDIRLAGFGSFTVSHRAATKG
RNPSTGAEVDIPARNVPKFTPGKGLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgaactcgtgtccgcagtcgccgaaaaggcaggactgacgaagtctgac
gcggcttccgctgttgacgcggttttcgacgttgtccaggccgaactcaagaacaagggc
gacatccgccttgctggtttcggcagcttcaccgtttctcatcgcgctgcaacgaagggc
cgcaacccgtcgactggcgctgaagtcgatattccggcccgcaacgtgccgaagttcacg
cccggcaagggcctgaaagacgccgttaacggctga
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