Rhizobium bangladeshense: J2J98_14915
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Entry
J2J98_14915 CDS
T07228
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J2J98_14915 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rban03019
]
J2J98_14915 (recQ)
03400 DNA repair and recombination proteins [BR:
rban03400
]
J2J98_14915 (recQ)
Enzymes [BR:
rban01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2J98_14915 (recQ)
Messenger RNA biogenesis [BR:
rban03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J2J98_14915 (recQ)
DNA repair and recombination proteins [BR:
rban03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J2J98_14915 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QSY87479
LinkDB
All DBs
Position
complement(3053011..3054879)
Genome browser
AA seq
622 aa
AA seq
DB search
MPLSERNEPGFSASDALFSAGRSPLDVLKQVYGYSSFRGKQQQVVEHVVSGGDAVVLFPT
GAGKSLCFQIPALCRDGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEFVEVRR
ALLAGKLDLLYVTPERILTDGFRELIASEKIALFAIDEAHCVSQWGHDFRPEYRELGRLG
AQYPDVPRVALTATADPHTRDDIVERLGLGNAEVFTTSFDRPNIAYEIVERDQPRQQLLR
FLSGHKGNSGIVYCLSRAKVEDTADWLNGQGIRALPYHAGMDRALRDANQDAFLKEENLC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSDVWMAYGMADVIQRR
RMIDEGNAADEIKRVERAKLNALLAICETASCRRQAILAHFGEAHAGQCGNCDTCLKPVE
TWEGTEAAIKALAAVYRTGERFGAGHVIDVLVGNVNEKTERFGHVDMPVFGAGKDIPART
WQSVYRQLLAMGLIRIDHEAYGALKLEPEARAVFKQERQVFFRKDRPASERRTKKAERSE
RKSGLSGADGTLFEALRAERMRIAKSLGVPPYVVFPDTTLIAFATERPRNRKELLGISGV
GQSKLERYGDAFLEIILSHDKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagcgaacgtaatgaacctggcttttccgcttccgatgcgctgttttccgcc
ggccgctcgccgctggacgtcctgaagcaggtctatggctattcctccttccgcggcaag
cagcagcaggtggtcgagcacgtggtttcgggcggtgatgcggtggtgctttttccgaca
ggtgcgggcaaatcgctgtgctttcagattccggcgctttgccgcgacggcgtcggcatc
gtcgtttcgccgttgattgcgttgatgcgcgatcaggtggaggcgatgaagcagctcggc
atcagggctgcggcactgaattcgtcactatcgcgcgaggaattcgtcgaggtccgccgc
gcgcttttggcgggaaagctcgaccttctctacgtgacgcccgagcgcatcctgaccgac
ggtttccgcgagctgatcgcaagtgagaagatcgcgctgtttgccatcgatgaggcccat
tgcgtctcccaatggggtcatgatttccgcccggaatatcgcgaactcggccgcctcggc
gcgcagtatcctgatgtaccccgcgtggcgctgacggcaacggccgacccgcatacgcgt
gacgatatcgtcgagcggctggggctcggcaatgccgaagtcttcaccaccagcttcgac
aggccgaatattgcctatgaaatcgtcgagcgcgaccagccgcgccagcagctcctgcgc
ttcctgtccggccataagggcaacagcggcatcgtctattgcctgtcgcgcgccaaagtc
gaggatacggccgactggctgaacgggcagggcatccgtgcgctgccctatcatgccggc
atggaccgggcgctgcgcgacgccaatcaggatgctttcctgaaagaagagaacctctgc
ctggtcgcgaccgtcgccttcggcatgggcatcgacaagccgaatgtgcgttatgtcgcc
catctcgatctgccgggctcggtggaggcctattatcaggagaccgggcgcgccggccga
gacggcctgccgtccgacgtttggatggcctatggcatggccgacgtcatccaacgccgc
cgcatgatcgacgagggcaatgccgcagacgagatcaagcgggtcgagcgcgccaagctc
aatgccttgctggcgatctgcgaaaccgcctcctgccgtcggcaggcgatccttgcccat
ttcggcgaggctcatgccggccaatgcggcaattgcgacacctgcctgaaaccggtcgaa
acctgggagggcacggaagcggcgatcaaggcgctcgccgccgtctaccgcaccggcgag
cggttcggcgccggccatgtgatcgatgttctggtcggcaacgtcaacgaaaagaccgaa
cgtttcggccatgtcgatatgccggtcttcggcgccggcaaggacattcccgcgcgcaca
tggcaatccgtctaccgccagctgctcgccatggggctgatccgcatcgatcatgaggct
tatggagcgctgaagctggagccggaggcgcgcgccgtcttcaagcaagagcgacaggta
ttcttccgcaaggacaggccggcctcggagcggcgcacgaagaaggccgagcgcagcgag
cgcaaatcgggcctgtcgggcgccgacggcacgcttttcgaggcgctgcgggccgagcgc
atgcggatcgccaaatcgctcggcgtgccgccctatgtcgtctttcccgacacgacgctc
attgccttcgcgacggaacggccgcgcaaccgtaaggaattgctcggcatatcgggcgtc
ggccaatcgaaactcgagcgctatggcgacgcgtttctggagatcattctctctcacgac
aaggactga
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