Rhizobium bangladeshense: J2J98_15000
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Entry
J2J98_15000 CDS
T07228
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00220
Arginine biosynthesis
rban00240
Pyrimidine metabolism
rban00250
Alanine, aspartate and glutamate metabolism
rban01100
Metabolic pathways
rban01110
Biosynthesis of secondary metabolites
rban01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
J2J98_15000 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
J2J98_15000 (carB)
00220 Arginine biosynthesis
J2J98_15000 (carB)
Enzymes [BR:
rban01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
J2J98_15000 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
CoA_binding_2
RimK
CbiA
Motif
Other DBs
NCBI-ProteinID:
QSY87495
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Position
3072618..3076106
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AA seq
1162 aa
AA seq
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MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
AAIDMAEDRALFREAMARIGLETPRSMLANATDIKDLDRKTHEAERNKLRESLSGSDLDK
ALDELENQWNLGESDRKQRYMNHAMAIAAQALDHVGLPAIIRPSFTLGGTGGGIAYNRSE
FFEIVGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS
SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPVLTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEIPDFEEGESSQNAI
RAAIGTPTPDRLRMVAQALRQGLSIEEVHEGCKIDPWFIAQLKNIVDMEARIREHGLPED
AANLRMLKAMGFSDARLATLTGKRPKEVAELRNGLNVRPVFKRIDTCAAEFASPTAYMYS
TYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGYEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEILRAEQEKGEVVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLNQPNNGIAYSVEQARLVAAEIGFPLVVRP
SYVLGGRAMQIIHAESQLQTYLLDTVPELVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY
LTHAIEVDVDCLSDGTDVYVAGIMEHIEEAGIHSGDSACSLPPRSLSVELIDELERQAKA
MAKALNVGGLMNVQFAIKDGTVYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEKLD
ATFAAYGQKPDPRKLKHIAVKEAVFPFARFPGVDTLLGPEMRSTGEVIGLDTDFALAFAK
SQLGAGVELPRDGTVFVSVRDEDKPRVLPAIRILVEEGFKVLATGGTARFLGENGITATK
INKVLEGRPHIEDAIRNRQVQLVINTTDGNKAISDSKSLRRATLMQKVPYYTTMAGAEAA
AQAIKALRAGNLEVRPLQSYFA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccaagacatcaaatcgatcctcatcatcggcgcgggaccgatcgtcatt
ggccaggcttgcgaattcgactattccggcacccaggcctgcaaggcgttgaaggaagaa
ggctaccgcgtcatcctcgtcaattccaatcctgcaacgatcatgaccgatccggggctg
gccgacgcaacttacgtcgagccgatcacccccgaggtcgtcgccaagatcatcgccaag
gaacgccctgacgcgctactgccgaccatgggcggccagacggctctgaacaccgccctc
tccctcaagcgcatgggcgtgctcgaccgctacaatgtcgagatgatcggcgccaagccg
gcggccatcgacatggccgaagaccgcgcgctgtttcgcgaggccatggctcgcatcggc
ctggaaacgccgcgctcgatgcttgcgaacgccaccgacatcaaggatctggaccgtaag
acgcacgaggccgagcgcaataagctgcgcgaaagcctttccggatccgatctcgacaag
gcgttggacgagctggaaaatcagtggaatctcggcgagagcgaccgcaagcagcgctac
atgaaccacgccatggcgattgccgcccaggcgctcgaccatgtcggcctgcccgctatc
atccgcccgtctttcacgctcggcggcaccggcggcggcatcgcctacaaccgttcggaa
ttcttcgagatcgtcggcggcggcctcgacgcctcgccgaccaccgaagtgctgatcgaa
gagtccgtgctcggctggaaggagtatgagatggaagtcgtccgcgacaaggcggacaac
tgcatcatcatctgctcgatcgaaaacatcgatccgatgggcgtgcataccggcgattcc
atcaccgtcgcgccggcgctgacgctgaccgacaaggaataccagatcatgcgcaacgcc
tcgatcgcggtgctgcgcgagatcggcgtcgagaccggcggctctaacgtccagttcgcg
gtcaatccgaaagacggccgcctcgtcgtcatcgaaatgaacccacgtgtgtcgcgttct
tcggcgcttgcatccaaggcaaccggtttccccatcgccaaggtcgcggccaagctcgcc
atcggctatacgctggacgaactggaaaacgacatcaccggcggcgcgacgcccgcttcg
ttcgagccgtcgatcgattatgtcgtgacaaagatcccgcgcttcgccttcgagaaattt
cccggcgcctcgccggtgctgaccacggccatgaagtcggtcggtgaagtcatggcgatc
ggccgcaccttcgctgaatcgctgcagaaggcgctgcgcggcctcgagaccggcctgacc
ggcctcgacgaaatcgagatccccgatttcgaggaaggcgaatccagccagaacgccatc
cgcgccgccatcggcacgccgacgccggaccgcttacgcatggtcgcccaggcgttgcgc
cagggcctcagcatcgaagaggtgcatgagggctgcaagatcgatccctggttcatcgcc
cagctcaagaatatagtcgacatggaagcccgcatccgcgagcacggcctgccggaggat
gccgccaacctgcgcatgctgaaggcgatgggcttctccgacgcccgccttgccacgctg
accggcaagcgcccgaaggaagttgccgaactccgcaacggcctgaacgtccgccccgtt
ttcaaacgcatcgatacctgtgcggccgaattcgcttcgccgaccgcttacatgtattcg
acctacgagacgccctttgtcggcgccgcccgctcggaagctcaggtctccgaccgcaag
aaggtcgtcatcctcggcggcggcccgaaccgcatcggccagggcatcgaattcgactat
tgctgctgccatgccgccttcgcgctgaaggatgcaggctatgaagcgatcatgatcaac
tgcaatccggaaaccgtctcgaccgactacgacacgtcagatcgcctctatttcgagccg
ctgacggccgaggacgtgatcgaaatcctgcgcgccgaacaggaaaagggtgaagtcgtc
ggcgtcatcgtccaattcggcggacagacgccgctgaagcttgccgaggcgctggaaaag
aacggcatcccgatcctcggcaccgcccccgacatgatcgatcttgccgaagaccgcgac
cgcttccaaaagcttctgatgaagctcgacctcaatcagccgaacaacggcatcgcctat
tctgtcgagcaggcccgcctggtcgccgccgagatcggcttcccgctggtcgtgcgcccc
tcctacgtgctcggcggccgagccatgcagatcatccacgccgagagccagttgcagacc
tatctgctcgacacggtgccggaactggtgcctgaggatatcaagcagcgttaccccaat
gacaagactggccagatcaacaccctgctcggcaagaacccgctgctcttcgacagctat
ctcacccacgcgatcgaagtcgatgtcgactgcctctccgacggcaccgacgtctatgtc
gccggtatcatggaacatatcgaggaagccggcatccactcgggcgactcggcctgctcg
ttgccgccccgttcgctgtccgtggaactgatcgacgagctggagcgccaggcaaaggcg
atggcaaaggcgctcaacgtcgggggcctgatgaacgtccagttcgccatcaaggacggc
acggtctacgttctcgaggtcaacccgcgtgcctcgcgcaccgtgcccttcgtcgccaag
accatcggcgcgccgatcgccaagatcgccgcccgcgtcatggccggcgagaaactcgat
gcgaccttcgccgcctatgggcagaagcccgatccgcgcaagctcaagcatattgccgtc
aaggaagccgtcttccccttcgctcgattccccggcgtcgacacgctgctcggcccggaa
atgcgctcgaccggtgaagtgatcggtctcgacaccgattttgcgttggccttcgccaag
tcgcagctcggcgccggcgtcgaactgccgcgcgatggaacggtcttcgtttccgtgcgc
gacgaggacaagccgcgcgtgctgccggcaatccgcatcctcgtcgaagagggcttcaaa
gtgctggcgaccggcggcaccgcccgcttcctcggcgaaaacggcatcaccgccaccaag
atcaacaaggttctggagggccgcccgcacatcgaggacgccatccgcaaccgccaggtc
cagctcgtcatcaacactaccgacggcaacaaggcgatctcggactccaagtcgttgcgc
cgcgcgacgctgatgcagaaggtgccctattacacgacgatggccggcgccgaagccgcc
gcccaggcgatcaaggcgctgagggcaggcaatctcgaagtccggccgctgcagagctac
ttcgcttga
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