Rhizobium bangladeshense: J2J98_15540
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Entry
J2J98_15540 CDS
T07228
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
rban
Rhizobium bangladeshense
Pathway
rban02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J2J98_15540 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rban02000
]
J2J98_15540 (choW)
Transporters [BR:
rban02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
J2J98_15540 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SVM_signal
Motif
Other DBs
NCBI-ProteinID:
QSY87596
LinkDB
All DBs
Position
3189059..3189904
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AA seq
281 aa
AA seq
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MNWITDFKIPIGPGAKSFVDWLTSNGAWFFDQLASLLSHVIDGLLFVLQKPHPLIVIAAI
AAIAFWLRRSIAVTLFTCLGLLLIMNQGYWKETTETLALVLASTFVSMVIGIPLGIAAAR
RAWVYAAMRPALDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPIRLTRLGIIS
TPPSLVEAAVAFGARPMQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVIAALVGADGLGV
PVVRALNTVNVAKGFEAGLCIVILAIILDRMFRTADEGDGA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ttgaattggatcaccgactttaagattcccattggccccggggccaagtccttcgtggat
tggctcacctcgaacggcgcctggttcttcgaccagctcgcctccctgctgtcgcacgtc
atcgacggcctgctcttcgtgctgcagaagcctcacccgctgatcgtcatcgccgccatc
gccgccatcgccttctggctgcgccggtcgatcgcggtcaccctctttacctgccttggc
ctgctgctcatcatgaatcagggctactggaaggaaacgacggagacgctcgctctcgtg
ctcgcctccactttcgtcagtatggtgatcggcattccgctcggcattgcagcggcccgc
cgcgcctgggtctatgccgcgatgcgcccggcgctcgatctgatgcaaaccattccgaca
ttcgtctatctgattccggcgctaatcctcttcggcctcggcatggtgccgggcctgatc
gcgaccgtcattttcgccatcccagcccccatccggctgacgcgcctcggcatcatttcg
accccgccatccctcgtcgaagccgcggttgccttcggcgccaggccaatgcaggtgctg
cgcaaagtcgagcttcccttcgccgcgccgcagatcatggcgggcctcacccagaccatc
atgctgtcgctgtctatggtggtcatcgccgccctcgtcggcgccgatggtcttggcgtg
cctgtcgtgcgcgcactgaataccgtcaacgtcgccaaaggcttcgaagccggtctctgc
atcgtcatcctggcgatcattctcgaccgcatgttccgcacggcggatgaaggagatggc
gcatga
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