Rhizobium bangladeshense: J2J98_19300
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Entry
J2J98_19300 CDS
T07228
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00300
Lysine biosynthesis
rban00470
D-Amino acid metabolism
rban01100
Metabolic pathways
rban01110
Biosynthesis of secondary metabolites
rban01120
Microbial metabolism in diverse environments
rban01230
Biosynthesis of amino acids
Module
rban_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J2J98_19300 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J2J98_19300 (lysA)
Enzymes [BR:
rban01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J2J98_19300 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6003
Motif
Other DBs
NCBI-ProteinID:
QSY88275
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Position
4004365..4005633
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AA seq
422 aa
AA seq
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MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPASRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDARTHSKISTGRKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIHHVDIGGGL
GVPYKDDNNPPPLPDAYAAIVKNQLRGLDCKIVTEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHAIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccacttcgagtaccgcgacggcgtcctgcacgccgaaaatgttcccgttcccgag
atcgccaaggcggtcggaacgcctttctacgtctattccaccgcgacgctggaacgccat
taccgggttttctcggaggctttcgccgatatggactcgatggtctgctatgcgatgaag
gcgaattcgaaccaggcggtgctgaaaacgctgggccgcctcggcgccggcatcgacgtc
gtctcggaaggggaactgcgccgcgcgctcgccgccggcattccggcaagccgcatcatg
ttttccggtgtcggcaagaccccgtccgaaatggatttcgctctcgaggcgggcatctac
tgcttcaacgtcgaatccgaacccgagctcgagatcctcaaccagcgcgccgtcagcgcc
ggcaaaaaggcgccggtctcgttccgcatcaatcccgacgtcgatgccaggacgcattcg
aaaatctcgaccggcaggaaggaaaacaagttcggcatttcctgggagcgggcccgcgcc
atctacgcccatgccgccaagctgccgggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagccgttcgatgacgccttcaagctgcttcgggacctc
gttgcgacgctgcgcgccgacggccacaccatccatcacgtcgatatcggcggcggcctc
ggcgtgccctataaggatgacaacaatccgccgccgctgccggacgcctatgcggcgatc
gtcaagaaccagctgcgcggtctggactgcaagatcgtcaccgagcccggccggctgatt
gttggcaatgccggcatcctggtgaccgaagtcctctatgtgaaggatggcggcgagaag
accttcgtcatcgtcgacggtgcaatgaacgacctcatccgtccgacactctacgaggcc
tatcacgagatccgtccggtgacgatttcggcggcgaacgcgccacgtatccgcgccgac
gtggttggccccgtctgcgagaccggcgattatctggcgctcgatcgcgaaatggcgatg
ccgaaacccggcgacctgatggccgtcagcactgccggcgcctatggcgccgtccaggcc
gggacctataacagccgcctgctggtgccggaggttctggtcaagggcagcgatttccac
gcgattcgcccccgcagaacctatgccgaattgatcagcctcgactcggttccggcttgg
ctcgactaa
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