Rhizobium bangladeshense: J2J98_19635
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Entry
J2J98_19635 CDS
T07228
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00630
Glyoxylate and dicarboxylate metabolism
rban00680
Methane metabolism
rban01100
Metabolic pathways
rban01120
Microbial metabolism in diverse environments
rban01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J2J98_19635 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
J2J98_19635 (fdhF)
Enzymes [BR:
rban01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
J2J98_19635 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_2
Fer4_9
Fer4_15
Fer4_8
Fer4_16
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
QSY88337
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Position
complement(4074356..4077235)
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AA seq
959 aa
AA seq
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MSLIHEIDYGTPASKSETMVTLTIDGQQISVPEGTSIMRASMEAGIEVPKLCATDMVDAF
GSCRLCLVEIEGRAGTPASCTTPVAANMVVHTQTGRLKDIRRGVMELYISDHPLDCLTCA
ANGDCQLQDMAGAVGLRDVRYGYEGDNHVKARNNGDINLKWMPKDASNPYFTYDPSKCIV
CSLCVRACEEVQGTFALTIEGRGFGSRVSPGMHESFMDSECVSCGACVQACPTATLTEKS
VIEIGQPEHSAVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THKDRVLNPMIREKVSDPWREVSWDEAFAHVASEFRRIQYQYGRDSIGGITSSRCTNEET
YLVQKLVRAGFGNNNVDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEHSDVVVIIGANP
TDGHPVFASRLKKRLRQGAKLIVIDPRRTDIVRSPHVEASYHLPLKPGTNVAVMTALAHV
IVSEGLYDETFIRERCDWSEFEDWAAFVAEPQHSPEETEIFTGVPAADLRGAARLYATGG
NGAIYYGLGVTEHSQGSTTVIAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDIFEKLWGVKLNNEPGLRIPNMLDAAVDGSFKGIYIQGEDILQSDP
DTKHVAAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMT
PRNGYGDWEVTQKLAQTMGLDWNYAHPSEIMDEIAATTPSFALVSYDYLEKMGSVQWPCN
EKNPLGSPIMHVNGFVRGKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRT
ENLVWHAEDRLEIHPHDAEQRGIRDGDLVKLASRSGDTTLRALITERVAPGVVYTTFHHP
NTQANVITTDFSDWATNCPEYKVTAVQVSPSNGPSEWQLEYDEQARQSRRIAGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatccatgaaatcgactacggcactcccgcttcgaaatccgaaaccatggta
acgctcaccattgatgggcagcagatcagcgtgccggagggcacctcgatcatgcgcgca
tcgatggaagccggcatcgaggtgccgaagctctgcgccaccgacatggtcgatgccttc
ggctcctgccggctctgcctcgtcgagatcgagggccgcgccggcactccagcctcctgc
acgacgccggtggcggcaaacatggtggtgcacacgcagacggggcgattgaaggacatt
cgccgcggtgtaatggaactctatatctccgaccatccgctcgactgtctcacctgcgcc
gccaatggcgactgccaattgcaggacatggcgggtgccgtcgggttgcgcgacgtacgc
tacggctatgagggtgacaaccacgtcaaagcgcgcaacaacggcgatatcaatctgaaa
tggatgccgaaggacgcgtccaacccctatttcacttacgatccctccaaatgcatcgtc
tgttcgctttgcgtgcgcgcctgcgaggaagtgcagggcaccttcgcgctgacaatcgaa
gggcggggtttcggctcccgcgtctcacccggcatgcatgagagtttcatggattccgaa
tgcgtctcctgcggcgcctgcgttcaggcctgtccgacggcgacgctcacggagaaatct
gtgatcgagatcggccagccagagcactcggccgtcaccacctgcgcctattgcggcgtc
ggctgctccttcaaggcggagatgcgcggcgaggaactggtgcgcatggtgccgtggaag
gacggacaggccaatcgcgggcattcctgcgtcaaaggccgcttcgcctacggctattcc
acgcataaggaccgtgttctcaacccgatgatccgtgaaaaggtcagcgatccctggcgg
gaggtaagctgggacgaggccttcgcgcatgtggcgtcggagttccgccgcatccagtat
caatatggccgcgactcgatcggcggcatcacctcctcacgctgcaccaatgaggaaacc
tatctggtgcagaagctggtccgcgccggtttcggcaacaacaatgtcgatacatgcgcc
cgcgtctgccattcgccgaccggttacggtctcggccagacattcgggacctcggccggc
acacaggatttcgacagcgtcgaacattcggatgttgtcgtaatcatcggcgcaaacccg
accgatggccatccggtgtttgcctcgcgactgaagaagcggctgcgccagggggcgaag
ctcatcgtcattgatccccgccgtacagatatcgtccggtcgccacatgtcgaggcttcc
taccacctgccgctgaaaccgggcaccaatgtcgcggtcatgacggcgctggcccatgta
atcgtcagcgaagggctctatgacgagacattcatccgcgagcgctgcgactggtcggag
ttcgaggattgggcggctttcgtcgccgaaccgcagcatagtccggaagagacggagatt
ttcaccggtgtgccggccgcggatctgcgcggtgcagcaaggctctatgccacgggcggc
aacggcgcgatctactacggcctcggtgtcaccgaacacagccagggttcgaccaccgtc
atcgcgatcgccaacctggcgatggcaacaggcaatatcggccgtcccggtgtcggcgtg
aacccgttgcgcggccagaacaatgtgcagggctcctgcgacatgggctctttcccgcac
gagttgcccggttaccggcatatttccgacgatgcgacgcgcgatattttcgagaagctc
tggggtgtaaagctcaacaacgagccgggcttgcgtattccgaacatgctggacgcagcg
gtcgacggttcgttcaagggcatctatattcagggggaggatatcctccaatccgatccc
gatacgaaacacgtcgcggccgggcttgccgcaatggaatgcgtcgtcgtgcaggacctg
ttcctcaacgagaccgccaactacgcccatgtctttctgccgggctcgaccttcctcgag
aaggacggcacgtttaccaatgccgagcggcgcatcaaccgcgttcgcaaggtgatgacg
ccgcgcaacggctatggcgactgggaggtgacgcagaagcttgcccagaccatggggctc
gactggaattacgcccatccgtcggagatcatggacgagatcgccgcgacaacgccgagt
ttcgcgcttgtttcctacgattacctggagaagatgggctcggtgcagtggccctgcaac
gagaagaacccactcggctcgccgatcatgcatgtcaacggtttcgtccgcggcaagggc
aagttcatccgcactgaatatgtggcgaccgacgagcgcaccggcccgcgcttcccgctg
ctgctcaccaccggccgcattctcagccagtataatgtcggagcgcagacacgccggacc
gagaacctcgtctggcacgcggaagaccggctggagatccatccgcacgatgccgaacag
cgcggcatccgcgatggcgatttagtgaagctcgccagccgctccggcgacaccacgctc
cgggcgctgatcaccgagcgcgtcgcgccgggcgtcgtctatacgaccttccatcacccg
aatacgcaggccaacgtcatcaccaccgacttttccgactgggcgaccaactgcccggaa
tacaaggtgacggcggtgcaggtctcgccctccaacgggccgagcgagtggcaactcgaa
tacgacgagcaggcacggcaatcacgccgcatcgccggcaagctggaagcggcggagtga
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