Rhizobium bangladeshense: J2J98_24775
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Entry
J2J98_24775 CDS
T07228
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rban03032
]
J2J98_24775
03400 DNA repair and recombination proteins [BR:
rban03400
]
J2J98_24775
Enzymes [BR:
rban01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J2J98_24775
DNA replication proteins [BR:
rban03032
]
Prokaryotic type
DNA Topoisomerases
J2J98_24775
DNA repair and recombination proteins [BR:
rban03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J2J98_24775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ACT
Motif
Other DBs
NCBI-ProteinID:
QSY91717
LinkDB
All DBs
Position
p2:194037..195071
Genome browser
AA seq
344 aa
AA seq
DB search
MNADAITELGLIYVSDTEPGIRRRRKGKGFSYVMPDGTTLSDEVQRARIGALGLPPAYEN
VWICLYENGHLQATGIDARGRKQYRYHKDWQSFRSAGKFYQLIEFGQALPKIRRAVLRHL
DTGAEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEISDLPGRQLFVWKDESGALKPVDSGRLNAYLAEISGIPI
SAKTFRTWAGSLAAFGAARERIVSGGRPTVKEMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLIEGGNEPLRGLRAEENRLLDFLIRETEGPHLAASRSG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgacgccatcaccgaacttggcctgatctatgtcagcgataccgaaccgggc
atccgcaggcgaaggaaaggcaagggcttcagctatgtgatgccggacggaacgacgctt
tccgatgaggtgcagcgggcgcgcatcggcgcgctcggcctgccgccggcctacgagaac
gtctggatctgtctctacgagaacggtcatctgcaggcgaccggcatcgatgcgcgcggg
cgcaaacaataccgctatcacaaggactggcaatccttccgcagtgccgggaagttctac
cagctgatcgaattcggtcaggcactgccgaagatccgccgcgccgtcttgcgccatctc
gacaccggtgctgaggatgtcaacggcgtgctggcggctttgacgacgctgctcgatgag
gcgcatctgcgcgtcgggaaccaggcttatgtcagggagaacggcacctatggggcgacg
accctgctgaaacggcatctgaagatcgtcgacgggcggatcgagctcaaattccgcgcc
aagggcggcaagcgcgtccagcgaagcctcaagcatcccaggctgcagaaaatcctcgaa
gagatttccgacctgcccggccgccagctcttcgtctggaaggatgaaagcggcgcgctg
aaaccggtcgattccggccggctgaatgcctatttggccgaaatatcgggcattccgatc
tccgccaagacgttccgcacctgggctggatcgctggcagccttcggtgcggcccgcgaa
aggatcgtcagcggcggccgcccgactgtgaaggagatgtcggaagctgcggccgaggcg
ctgcacaatacgcctgcgatctcacgctcgagctatatccatccggcaatcatcgctctg
gccggcaatgatcatcctttgatcgaaggcggcaacgagccgctgcgggggctgcgggcc
gaagaaaacaggctgcttgatttcctcatacgcgagaccgagggacctcatctcgcggcg
tctagatccgggtaa
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