Rhizobium bangladeshense: J2J98_25820
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Entry
J2J98_25820 CDS
T07228
Name
(GenBank) DUF1989 domain-containing protein
KO
K28979
trimethylamine-oxide aldolase [EC:
4.1.2.32
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00680
Methane metabolism
rban01100
Metabolic pathways
rban01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
J2J98_25820
Enzymes [BR:
rban01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.32 trimethylamine-oxide aldolase
J2J98_25820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCV_T
DUF1989
GCV_T_C
Motif
Other DBs
NCBI-ProteinID:
QSY91512
LinkDB
All DBs
Position
p2:411250..413619
Genome browser
AA seq
789 aa
AA seq
DB search
MRELHPAMPGLRTVVPSLVHYPGIPALPEGTERYRAKGGGSVVVRVEAGDRVSVIDSEGG
QICELSFLDEKGRFQADGIGTAFTNSAEGLKTILQAEDESAARTGAALQRRGADLAAAGA
LRIFGAGSTPGSRAEFTIAMKGLLIVAAPAGAMSPEAQETATPIEIRVKRSLLIRDYASA
LPEPAADPIEDIRVRAASAAAYFVRAGEFIQIIDVYGRQCTDFQAFAARKVDKGLDLALD
STVTRTLLGRSYPMPGLPSKAFDRDFEPLVEIVQDTVGRHDAFATACNSRYYDDMGYPGH
VNCTDNFNAALAPYGIAGRKGWEALNYFYNTNIDHNNQLYLDEPWSRPGDYVLMRALTDL
VCVSSSCPDDIDAANGWDPTDIHVRTFSGKEKFSRAVAYRMTPDAEVELTRETAFHPRLS
ALTRDYTEYRGYWLPNRFSSEGPVEEYWACRERAAVIDLSPLRKFEVTGPDAEELLQYCL
TRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDKNFRWIGGDDFSGIWLRQQAEKKGF
KAWVRSSTDQLHNIALQGPRSRDILKEIIWTAPRQPAIGELEWFRFTVGRIGGFEGPPVV
ISRTGFTGELGYEIFCHPKDALTVFDAVWEAGQPHGLKPMGLEALDMVRIEAGLIFAHHE
FTDQTDPFEAGIGFTVPLKSKQDDFIGREALIRRKEHPRHLLVGLDIQANEAVGHGDCIH
IGRAQVGVVTSATRSPVLGKTIALARIDVMHASPGTEVEIGKLDGHQKRLPATIVPLSHY
DPQKTRPRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaacttcatcctgccatgccgggcctgcgtacggtcgttccgagcctcgtccat
tatcccggtattccagccctgccagagggcacggagcgttacagagcgaagggcggcgga
tcggtcgtcgtacgcgtcgaggccggcgaccgcgtgagcgtcatcgacagcgaaggcggg
cagatctgcgaactctccttccttgacgaaaaggggcgcttccaggcagacggtatcgga
acggcattcaccaattcggccgagggcttgaagaccattcttcaggcagaggatgagagt
gctgcccgcacaggcgcggcacttcagcggcgcggcgccgatctcgcagcggccggagcg
ctccgcatcttcggggcaggatcgacgccgggcagccgggcggagttcacgattgccatg
aagggcctgctgatcgttgcggcacccgccggcgccatgtcgccggaggcgcaggagacg
gcgacgccgatcgagatccgggtcaagcgcagcctgctgatccgcgactatgcctccgcc
ctgccggagccggcggcggatccgatcgaggatatccgcgtccgggcggcgagcgccgcc
gcctatttcgtgcgcgccggtgaattcatccagatcatcgatgtctatgggcgccagtgc
accgatttccaggcctttgccgcccgtaaggtcgacaagggcctcgatctcgcgctcgat
tcgaccgtcacccgcacgctgctcggccgcagctatcccatgcccggcctgccgtccaag
gcattcgaccgcgacttcgagccgctggtcgagatcgtccaggatacggtcggccgccac
gacgctttcgcaaccgcctgcaattcacgctattacgacgacatgggttatcccggccac
gtcaactgcaccgacaattttaatgcggcgctggcgccctacggcattgccggccgcaag
ggctgggaagcgctgaactatttctacaacaccaatattgaccacaacaaccagctctat
ctcgacgagccctggtcgcgtcccggcgattacgtgctgatgcgggcactgaccgatctc
gtctgcgtctcatcgtcctgccccgacgatatcgatgcggcgaacggctgggatccgacg
gatatccacgtccgcaccttttccggaaaagagaaattctcacgagcggtagcctatcgc
atgaccccagatgccgaagtcgaactgacgcgcgaaaccgccttccatccccgcctctcg
gcgttaacgcgagattatacggaatatcgcggctactggctgccgaaccgcttctcgtcc
gaaggcccggtcgaggaatactgggcctgccgcgaacgcgccgccgtcatcgatctctcg
cccttgcggaagttcgaggtgacgggtccggatgccgaggaattgctgcaatactgcctg
acgcgcgacgtgcgcaaactctcgacaggccaggtcgtctattccgcgatgtgctacgaa
aatggtggcatgatcgatgacggcacgctcttcaggctgggcgacaaaaacttccgctgg
atcggcggcgatgatttcagcggcatatggctgcgtcagcaggccgagaagaagggtttc
aaggcctgggtccgctcatcgaccgaccagctgcacaacatcgccctgcaaggccccagg
agccgcgatatcctgaaggagatcatctggacggcgccgcgccagcccgcgatcggtgag
ctcgaatggttccgcttcaccgtcggccgcatcggcggattcgaggggcccccggtcgtg
atctcgcgcaccggctttaccggcgagctcggctacgaaatcttctgtcatccgaaggat
gcgttgacggtgttcgacgccgtctgggaggcaggccagccgcacgggctgaagccgatg
gggctggaagcgctcgacatggtccgcatcgaggcgggcctgattttcgcccaccacgaa
ttcaccgaccagacggatccgttcgaggccggcatcggctttaccgtgccgctgaaatcc
aaacaggacgatttcatcggccgcgaggcgctgatccgacgcaaggagcacccgcgccat
ctgctcgtcggcctcgacatccaggcgaacgaggcggtcggccatggcgattgcatccat
atcggccgcgcccaagtcggtgtcgtcaccagcgccacgcgctcgcctgttctcggcaag
acgatcgcgctcgcccgcatcgacgtgatgcatgcaagcccgggcactgaagtcgagatc
ggcaagctcgacggccaccagaagcgcctgccggcgacaatcgtgccgctttcgcattac
gacccgcagaagacgcggccgcgctcgtaa
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