Rhizobium bangladeshense: J2J98_26625
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Entry
J2J98_26625 CDS
T07228
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
J2J98_26625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
QSY91976
LinkDB
All DBs
Position
p3:137319..143444
Genome browser
AA seq
2041 aa
AA seq
DB search
MKPFNTLSDIRRRSAEAIIAQSGIRNVALADHMRRMFGSDTPDAGALLQRPVIEGSHPYV
AAKKTMSEVEASVLHPRFVSMLDEIGPSNDYRFPKGRRPFAHQLTAWEHLAGRAARQSVL
VTSGTGSGKTECFLFPILSDLVRQLDATSTPLEGVQAIMLYPLNALIESQQERLSTWTAP
FGGKIRYCLYNGNLPQSEPNSVRRETLEKLRDREQLRASPPPVLVTNITMLEYMLARSED
QPIIEKSKGKLKWIVLDEAHSLVGAAAAEIALLLRRVLLAFECKPEEVHFVATSATIGSG
DDIQAQLKRFLADVAGIEHANVHVVEGHRQLPGRPAKRGRITDVKALFDARPEERYEALA
ADDRVWSLISDRLFKGPLTLAEFERSAQSLGLDAEQFLTLLSSAVRPHPDAKEDEERLAP
VRVHCFERAVPGLWTCVNDGCSASPAGWSFGAVYLDRCDLCPACSAPVLEIVSCSECGEV
VLEAIELPNDRIRGTRRDLGKDEFEAEATREDDGTGDDADDEADDAEQGLVGNVVGTEIL
IGIAAGPDFRPLHLSRTDWKIEAVASPGSASVYSALKQDSCPCCQIGATNGVDKLLRPVR
FGAPFMIASAAPILLEGVDPEVDREASPSQGRRVLSFTDSRQGTARMSAKIQAEAERNFV
RSFVYHTVQHSLQIGTAVDTSEIERTIASLEPVVAATRDPSLQNLLDQQRKALADASKPS
LEGVTWDDMVARLSQRKEVGQWVKEVWEPRDPGLFNDSRKLADFLLLREFARRPRTALSL
ESLGLARLRFAVIDSQTVVPPAFARHGKGIEDWRSFLYAITAFFLRANSAVAIHPAVMHW
ITPRAKMRGLRAPGRTTDGDRRFLAWPGVPRKGNPSTPQLLLMNGLGLDRSRPDHRADFE
EIFDRAWHQLQAVFNSDPDRPALDLRKAHIAPLPDGYYCALTRRIVDIAPFGSSPLVRAS
RHSARRVAESRKMPNLPAVLLGDVDFDEGRRKIREWLEDSEEVKGLRADSAWNNISDRVA
LFADYSRSAEHSAQQDAAVLQHYEAQFKAGKINILNCSTTMEMGVDIGSVSTVLMTNVPP
SIANYKQRVGRAGRRRQPFSLAFTFCRDRPLDREAFNSPERYLARTLAAPKVALSSRPIV
QRHVNAYLLRRFMLARGGNPLKMEIGAFMGTPAVVGEARAIAELRPIAAFREWLGNPSTA
AAVESELTSLVRHSVLEGQSDLVESCLEIATLLETGFVNEWTGLQALAKDEGIKVAAKGR
MALELKRLCQEFLLSALADRGFLPGHGFPTGVVTFVPHKPKSTDPQDGRRTTRLIGPQRS
LDLAIRDYAPGSEIVLDGLVHKSAGVLLNWKRPASEENVREVQSLKFHWVCQSCGTSDTG
RDLVTECPICAGAVRNQQYLRPAGFSVDAREKAHAETDIISYVPPEEPSVSVRASAWASL
PMPDLGRFRSTREGSVYYSNRAQSKNGYALCLHCGRAAPDHQKLENGDPDPTHSSPLELH
LPLRWKKGESRLFCEGNDSSWAIKRNLELGYEITTDVFELQPSAPMTKAAATALVIALRE
GVARDLGIEADEMGFATQSWDGVLAQRVRSMLVFDRAAGGAGFSAAIPARLVTVLREARS
ILNCPNPGCSTGCASCVLVSDAPFEEGRLDRTAALDFLDAHLSFNDDVPTEDRFGADPVL
SASTLDEVNRLLVDSAKPIVHVFLPEATDAGQLSEWASLSQFGKWYSQGYDVRFVLPDVA
LSSYDGASKLAFYDLGQRFSRTGGTFAILSGNPAAEANGAFAGISVTSAGRTTAWASRDT
SSWLPGTRWGQPATMPVVKAAVNWTPTFSPLESKALLPSAKSRYEPIKGELDRSLTLFGS
GMASRIRGLLEELGIPKTSAIESIVYSDPYVKSPLVAKMFVDTVAALVKGSTSRPIVSLL
TGDKPGTKHGMQNAISNDWRDSAVAEMVLKEYAKRKDVDLNITFQRVAHGRYMHLRFTGG
KQATIVFDQGFGAWNTVGNGAASTRFEFRDPPVRQAESMGRCGAMVSKTGLGPTYLVASI
D
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccctttaatacgctttccgatattcgtcgcagatctgccgaagcaatcatcgct
cagtcggggatcaggaacgtggcgctcgccgaccatatgcggcgcatgttcggctccgac
acgccagatgcaggcgccctgctccagcggccggtcatcgaaggatcgcatccttacgtc
gccgccaagaagacgatgtccgaagtagaggcatcggtgctgcaccctcgcttcgtctcg
atgctggatgagatcggaccatcgaacgactatcggttccccaaggggcgccgtcccttt
gcccatcagttgaccgcctgggagcatctggctggccgcgcggcccgtcagtccgttcta
gtcacctcgggaaccggttcgggcaagacggaatgcttcctgttcccgattttgagcgac
cttgtccgacagctcgatgcgacgagcacgccgctcgaaggcgttcaggcaatcatgtta
tatccgttgaacgcgctgatcgaaagccagcaggaacggctgtccacctggacggcgccg
ttcggcggaaagatcaggtactgcctctacaacggcaaccttccgcaatccgaaccgaac
tcggttcgtcgggagacacttgagaagctcagggatcgcgagcagctacgagctagtccg
cccccggttctggttacgaacatcacgatgcttgagtacatgctcgcacgcagcgaggac
caaccgatcatcgagaaatccaagggaaaactgaagtggatcgttcttgacgaggcgcac
tcgttagtgggcgccgccgcggctgagattgcgctactgctgcgtcgcgttctcctggcc
ttcgaatgcaaacccgaagaggttcatttcgtggcgacgtcggccacgatcgggagtggc
gacgacatacaggcgcagctcaaacggttcttggccgacgtggcgggtatcgagcatgcg
aacgtgcatgtcgtcgaaggtcaccgccagcttcccggccgtcctgcgaaacgcgggagg
atcaccgatgtcaaagcccttttcgacgctcggcccgaagagcgttatgaagcactagcg
gccgacgatcgcgtatggagcctcatttctgatcgactgttcaaggggccgctgacgctt
gctgaattcgaacgatctgcgcagtctctaggtctcgacgcagaacaattcctgacgctg
ctgtcgagcgcggtcaggccgcatcccgacgcgaaggaggacgaggagaggcttgcgccc
gtgcgtgtgcactgtttcgagcgggctgtacccggcttgtggacctgcgtgaacgatggc
tgctcggcgtcgccggcgggctggtccttcggcgcggtatatctcgatcgctgcgacttg
tgcccggcgtgtagcgctccggttctcgagatcgtgagctgctcggagtgcggcgaggtc
gttctcgaggcaatcgaacttccgaatgatcggatccgcggtacccgccgcgacctgggc
aaggacgagttcgaagccgaggcgactagggaggacgacggcaccggcgacgacgcggat
gacgaggccgatgacgccgagcaggggttggtcgggaatgtggtgggaaccgagatactg
attggcatagcggccggccccgacttccgaccattgcacctgtcgagaaccgactggaag
atcgaggctgttgcgtcgcccggctctgcatccgtgtactcggccttgaagcaggactcg
tgcccgtgctgccagatcggcgcgactaacggcgtcgacaagctacttcgccccgttcgc
ttcggagcgccgttcatgattgcgagcgccgcaccgatccttctcgaaggagtggaccca
gaggtggacagggaagcctcgccgtctcagggtcggcgcgtcctatcgttcacggacagc
cggcaggggacggcccgcatgtcggccaagatacaggccgaggccgagcgaaactttgtc
cgctcgttcgtatatcataccgtccagcattcgcttcaaattgggaccgcggtagacacg
tccgagatagagaggacgatagcaagcctcgagccggtcgttgccgccaccagggatcct
tcactgcagaatctgctcgaccagcagagaaaagcgctcgccgacgcatccaaaccttca
ctggagggagtcacatgggacgatatggtcgcacgtctgtcgcagcgaaaagaggtcggt
cagtgggtgaaagaggtctgggagcctcgcgatccgggactgttcaacgacagcaggaag
ctggctgactttctcctgctccgagaattcgcgaggcgcccgcgaaccgcgctttctctt
gaaagcctcgggctcgcgcggctccgcttcgccgtgatcgacagccagactgtcgtaccg
cccgctttcgcccgacatggaaaggggatcgaggactggcgctctttcctatacgccatc
accgcgttcttcctgcgcgccaattccgcggtcgcgatccacccggcggtcatgcactgg
atcacgcccagggcgaagatgcggggtttgcgcgctccgggcaggaccactgatggcgat
aggcggtttttagcgtggccgggtgtcccgaggaaggggaatccttcgacgcctcagttg
ctcctgatgaacggacttgggctcgatcggtcgcggccagatcaccgcgccgatttcgaa
gagatattcgacagggcatggcatcagcttcaggcagtgttcaacagcgatccggatcgc
cctgccctcgacctgcgcaaggcccacatcgcgcccctgcccgacggctattactgcgcc
ctgacgcgcagaattgtcgacatcgccccattcggctcaagtccgctcgtccgggcgtcg
aggcattccgcccgccgcgtggcagagtccaggaagatgcccaatcttcccgcggttctg
ctcggcgacgtcgacttcgacgaaggtcggcggaagatccgcgaatggcttgaggactcc
gaagaggtgaagggtctgcgggcagacagtgcctggaacaacatttcggaccgcgtcgcc
ctgttcgctgattactcgcggtctgccgaacattcggcccagcaggacgccgccgtactt
cagcattacgaggcgcagttcaaggcagggaaaatcaacattctgaattgctcaacgacg
atggagatgggcgtcgacatcggatcggtctcgacggtcctgatgacgaacgttccaccg
tcgattgccaattacaagcagcgagtgggacgcgccggccgacgcaggcagccattttcg
ctcgccttcaccttctgcagggaccgccccctcgaccgggaagccttcaattcaccggag
cggtatctggcccgcaccttggcggcgcccaaggtggcgctgagcagccgcccgatcgtt
cagaggcacgtgaacgcctacctgctgcgacgtttcatgctcgcgcgcggcggcaacccg
ctcaagatggaaatcggggcgttcatgggtactccggcggtggtcggcgaggctagggcc
attgcggaattgcggccgatcgcggcgtttcgcgagtggcttggaaatccttcgacagcc
gccgcggtcgagagcgagctcacaagcctcgtcaggcactcggttctcgaaggacaatcc
gatctcgtcgagagctgcttggaaatcgcgacgcttctggaaacggggttcgtaaacgaa
tggaccggcttgcaggctctcgccaaggacgaaggcatcaaggttgctgccaaggggaga
atggctctcgagttgaagcgcctttgccaggaattcctcctcagcgcgctagccgatcgc
ggcttccttccaggccacggctttccgaccggcgtcgtcacgttcgtcccacacaaacca
aaatccaccgacccgcaggatggacggcgcacgacgcggcttatcggaccgcagcgatcg
ctcgacctcgctatccgtgactacgccccaggttccgagatcgtcctagacggtctggtg
cataagtccgctggcgtgcttctgaattggaagcggccggcgagcgaggaaaacgtccgc
gaggttcaaagcctaaagttccactgggtgtgccagagctgcggcaccagcgataccgga
cgtgacctggtgaccgaatgcccgatctgcgcgggggcagtgagaaatcaacagtatctc
cgtccagcagggttctccgtagacgcccgagagaaagcgcatgcggaaacggacatcatc
tcctacgtccccccggaagagccgagcgtctcggtgcgcgcgagcgcttgggcttcgctc
ccaatgccagatctcggccggttcaggagcacgagagaagggtccgtctactacagcaac
agggcgcaatcgaaaaacggatacgccctctgccttcactgcggtcgcgcggcgcccgat
caccagaagcttgagaacggcgatcccgatcctacgcactcatctccgctcgagctgcac
cttccactgcgatggaagaagggcgagagtcgactattctgcgaaggcaacgacagttcc
tgggccatcaagaggaacctggaactcggctatgagatcacgactgacgtcttcgagctc
cagccgtctgcgcccatgacaaaagctgcagcaaccgcgcttgtcattgccctgcgcgag
ggcgtggctcgcgacctcggtatcgaagcagacgagatgggatttgcgacgcaaagctgg
gacggcgtcctcgcccagcgtgtccggtcgatgctcgtgttcgaccgcgccgcaggagga
gcaggattctcggctgcgataccagcgcgcctagtcaccgtcctgcgggaggctcggtcg
atactgaactgtccgaatccgggatgctcgacgggatgcgcgtcatgcgtgctggtgtcc
gacgctcccttcgaagagggtcgactagatagaaccgcagctttggacttccttgacgct
catctctcgttcaatgacgacgttccaacggaggaccggttcggggcggatccagtgctc
tccgcgtccactttggacgaagtcaatcggcttctcgtcgactctgcgaagcctatcgtt
cacgtcttccttcccgaggcgacggatgccggacaactttcagagtgggcgtcgctctcg
cagttcggaaagtggtactcgcaaggatacgacgttcgtttcgtcctgccggacgtcgcc
ctttcttcctacgacggtgcgagcaagctggcattctacgatctcggacagcgtttcagc
cgaacaggaggcaccttcgcgatcctgtctggaaacccggccgccgaggccaacggcgcg
ttcgctggtatttcggtgacctcggcgggccgaaccactgcgtgggcgtcgagggacacc
tcatcctggcttcccggaacgaggtgggggcagcctgcgacaatgccggtggtcaaggcg
gccgtgaattggacacccactttctctccgctggagagcaaggcactgcttccgtcggcc
aagtccagatacgaaccgatcaaaggcgagctggaccgatcgctgacactgtttggaagc
ggaatggcatcaaggattcgggggctgctcgaagagcttggaataccgaagacatcggcg
atcgagtccattgtctacagcgatccatacgtgaagtcgccgttggtggctaagatgttc
gtcgacaccgtggccgcgttggtaaagggctcgacgtctcgacccatcgtctcgctacta
accggcgacaagccgggaacgaagcatggcatgcagaacgcgatctcgaacgactggcgc
gacagcgcggtggcggagatggtgttgaaggaatacgcgaaaaggaaggacgtcgacctt
aatatcacgttccaacgtgttgctcacggtcgctacatgcatctgcgttttaccggtggg
aagcaggcgacgatcgtgttcgaccaaggtttcggggcatggaacacggttggaaacggg
gcggcgtccacccgtttcgagttccgagatccgcccgtccgtcaggcggagtcgatgggc
agatgcggtgcgatggtaagcaagacaggtcttggtcccacgtaccttgtggcgagcatc
gattag
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