Rhizobium bangladeshense: J2J98_26665
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Entry
J2J98_26665 CDS
T07228
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
rban
Rhizobium bangladeshense
Pathway
rban02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J2J98_26665 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rban03000
]
J2J98_26665 (nifA)
Transcription factors [BR:
rban03000
]
Prokaryotic type
Helix-turn-helix
Other families
J2J98_26665 (nifA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
Mg_chelatase
AAA
AAA_3
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QSY92023
LinkDB
All DBs
Position
p3:152764..154320
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AA seq
518 aa
AA seq
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MTKPDERIRLLSEIAGDLISSPLEIALKVVMNTLDRHLPMRDGVIVIYGTGREPKLTVWH
ADGHDVRSRSLTVEQSDAINCAFASGEPHFVKKTVAVGFKMKGEAIGALWIDRTFYGSAV
AGETALMKHIANLIAKASRRELCSGGGSVPEEQQAGQIPKIKPKSHPTQVAKIDWIVGES
PALKRVLATTEIVAATNATVLLRGESGTGKECFARAIHALSIRKSKAFIKLNCAALSETV
LESELFGHEKGAFTGALLQRAGRFELANGGTLLLDEIGDVSPQFQAKLLRVLQEGEFERL
GGTKTLKVDVRIICATNKNLEVAVLRGEFRADLYYRINVVPIVLPPLRQRDGDILLLAQV
FLEKFNKANDRNFCFTPSAKDVLSKCAFPGNVRELDNCVQRTATLASSNTIASSDFACQQ
GQCSSALLWKDAGDVIDNDAVHSLNPRDTMSSGLGPYAGAPSGATATMEAPSLTERDRLI
NAMVKAGWVQAKAARILGKTPRQVGYALRRFRIDVKKE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaccagacgagcggatccggctactctccgaaatcgccggcgatctcatatct
tcccctcttgagatcgcgctgaaggtggtcatgaacaccctcgacagacatctgccaatg
cgagacggcgtgatcgtgatttacggcacgggacgagagcccaaactaaccgtatggcat
gccgatggccacgacgttcgctcacgttctcttacggttgaacagtcggatgcaataaat
tgcgccttcgctagcggtgagccgcattttgtgaaaaaaactgttgctgtaggcttcaaa
atgaaaggggaagcaattggcgctttgtggatagatcgcactttttacggcagcgcggtg
gccggcgagacggcgcttatgaaacacatcgctaacctgatcgccaaagctagccgtcgc
gagttgtgcagcggtggcggatcagtccccgaggaacaacaagcaggacagattccgaaa
atcaagccgaagtctcatcccacccaagtcgctaaaatcgactggatcgttggggagagc
cccgcgctaaagagggtattagctaccaccgagatcgtggccgcgaccaacgccacggtg
ctcttgagaggagagagcggcactggcaaggaatgctttgcaagagcaatacacgcgtta
tcgatacgtaaaagcaaggcgtttattaagttgaattgcgccgcgctgtcggaaaccgtt
ctggaatctgaattatttggccatgaaaagggcgctttcactggcgctctccttcaacga
gctggacgtttcgaactggcaaatggcggaacactgttgcttgatgaaatcggcgatgta
tcaccacaattccaggcaaagttattgcgcgtattgcaggaaggtgaattcgaacgtctc
ggcggaacgaagacattgaaagtagacgttcgaattatatgcgccaccaacaaaaacctt
gaagtggccgtccttcgtggggagttcagagccgatctctattatcggatcaatgtggtg
cccatcgttttgccgccacttcgccagcgcgacggtgacattttgcttctagcgcaagtg
ttcctcgagaaattcaacaaggcaaatgatcgaaatttctgcttcacgccgtcggcaaaa
gacgttttgtcgaaatgcgccttccccggcaatgttcgcgagctggacaactgcgtacaa
aggaccgctactctcgccagttcaaatacgattgcttcatcagattttgcctgtcagcaa
ggccagtgttcttcggcgctcctctggaaagacgccggcgacgttattgacaacgacgcg
gtgcatagtctcaacccgcgagatacaatgtcgagcggactgggcccctacgcaggcgct
cccagcggtgccacagccacaatggaggcaccgagtctcactgagcgtgatcgactgatc
aatgcaatggtgaaggctggttgggtacaggccaaagcagctcgtatccttggtaaaacg
ccgcggcaggtcggctatgcgctacgccggtttcgtatcgatgtgaagaaggagtga
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