KEGG   Rhizobium bangladeshense: J2J98_27435
Entry
J2J98_27435       CDS       T07228                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
rban  Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:rban00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rban03016]
    J2J98_27435
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rban02048]
    J2J98_27435
Transfer RNA biogenesis [BR:rban03016]
 Prokaryotic type
  tRNA degradation factors
   J2J98_27435
Prokaryotic defense system [BR:rban02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    J2J98_27435
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: QSY91860
LinkDB
Position
p3:complement(317229..317648)
AA seq 139 aa
MARYMLDTNMCIYLMKNQPEQVARRFASCYVGDVVMSAITFAELGYGVSASDDPARELDN
LTALAELITVEPFGIAAARAYGPVRMATRDRKIDHLDKLIASHAIALDTVLVTNNTRDFL
AHPGLKLENWLDAERRETN
NT seq 420 nt   +upstreamnt  +downstreamnt
atggcgcgttacatgctcgatacgaacatgtgtatctacctgatgaaaaaccagccggag
caggtcgctcgccgctttgccagttgctatgtgggggacgtggtgatgtccgccatcacc
ttcgcggaactcgggtacggtgtttccgcatccgatgatccggcacgagaacttgataat
ctcaccgccctggccgagctgatcacggtagagccgtttgggatcgcagcagcgcgtgcc
tacggtccggttcgaatggcgacgagagaccggaagatagatcatctcgacaaactgatc
gcatcgcatgcgatcgctctggacacggtattggtgaccaacaacacgcgggacttcctg
gcgcatcccggactgaagctcgaaaactggctggacgcggaacgcagagaaaccaattaa

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