Rhizobium bangladeshense: J2J98_27535
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Entry
J2J98_27535 CDS
T07228
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00730
Thiamine metabolism
rban01100
Metabolic pathways
rban01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
J2J98_27535 (thiC)
Enzymes [BR:
rban01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
J2J98_27535 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QSY91870
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Position
p3:complement(333502..335328)
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AA seq
608 aa
AA seq
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MNIAAKNITPSVTIGPLPASRKIYIRGDVHPEICVPMREISLHPTSGEPPVVVYDSSGPY
TIEGTEIRIEQGLPSLRRDWVLARGDVEAYQGRHVRPEDNGFASGERLTPEFPALRQPLR
AKDGKAVTQFAYARAGIITPEMEFIAIRENLGRKARAEAMVRSGESFGAQIPNHVTAEFV
RQEVAAGRAIIPANINHPEAEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAARWG
ADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVEGIAENLTWEVYRDTLIEQA
EQGVDYFTIHAGVRLHYIPLTANRVTGIVSRGGSIMAKWCLHHHRESFLYEHFEEICDIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWTKDCQVMIEGPGHVPMHKI
KENMDKQLEVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKVGVITYKVAAHAADLAKGHPAAQLRDDALSRARFEFRWEDQFNLSLDPETAR
SFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLDAMAARYREGGDLYMPV
EILQQSSE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgccgcaaagaatatcaccccatccgtcaccatcggccccttgccggcatcc
aggaagatctacattcggggggacgtccatcccgaaatttgcgtgccgatgcgcgaaatc
agcctgcatccgacatcgggcgagccgcccgttgtcgtctacgactcgtccggcccctat
acgatcgagggcaccgagatccgcatcgaacaagggctgccctcactgcgacgtgactgg
gttctcgcccgcggcgacgtcgaggcctatcagggccgtcatgtccgtcccgaagacaac
ggctttgccagcggcgaaaggctgacgcccgaattccccgcgctacgccagccgctgcgc
gcaaaggacggcaaggccgtcacccagttcgcctatgcgcgcgccggtatcatcacgccg
gaaatggagttcatcgccatccgcgaaaatctcggccgcaaagcgagggccgaagccatg
gtccgcagcggcgaaagtttcggcgcccaaattccgaaccatgtgacggcggaattcgtc
cggcaggaagtggcggcgggtcgggcgatcatccccgccaacatcaaccatccggaagcc
gaaccgatgatcatcggccgcaattttctggtgaagatcaacgccaatatcggcaactcg
gccgtcacctcatcgatggcggaggaggtcgagaaaatggtctgggcggcccgctggggc
gccgataccgtcatggatctctccaccggccgtaacatccacaacatccgcgaatggatc
atccgcaattcgccggtgccgatcggtaccgtgccgctctatcaggcgctggagaaggtc
gagggcattgccgagaacctgacctgggaggtgtatcgcgacacgctgatcgaacaggcc
gaacagggcgtcgactatttcaccatccatgccggcgtgcggcttcactacatcccgctc
accgccaaccgcgtgaccggcattgtctcgcgcggcggttcgatcatggcgaagtggtgt
ctccatcatcaccgcgaaagcttcctctacgagcatttcgaggagatctgcgacatctgc
cgcgcctatgacgtctccttctcgctcggcgatggcctgcgccccggctcgatcgctgac
gcgaatgatgcggcgcagttcgccgaactggaaacactgggagagctgaccaagatcgcc
tggacgaaagactgccaggtgatgatcgagggccccggccatgtgccgatgcacaagatc
aaggagaacatggacaagcagctcgaagtctgcggcgaggcgcctttctacacgctcggg
ccgctgacgaccgatatcgcgccgggctacgatcacatcacctctgggataggcgcagcc
atgatcggctggttcggcacggcgatgctctgctacgtcacgcccaaggagcatctgggg
cttcccgaccgcaacgacgtgaaggtaggcgtcatcacctacaaggtcgccgcccacgcc
gccgatctcgccaaggggcatccggccgcgcaactgcgcgacgacgcgctctcccgcgcc
cgtttcgaattccgctgggaggatcagttcaacctctcgctggaccccgaaaccgcccgc
agcttccacgacgagacgctgccgaaggaagcccataaggtggcgcatttctgctccatg
tgcggtccgaaattctgctccatgcgcatctcgcacgatatccgcgccgaagcacagaag
gaaggtctggatgcgatggcagcgcgttatcgcgagggcggagacctctacatgccggta
gaaatcctgcagcaatcgagcgaatga
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