Rhizobium bangladeshense: J2J98_29880
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Entry
J2J98_29880 CDS
T07228
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00730
Thiamine metabolism
rban01100
Metabolic pathways
rban01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
J2J98_29880 (thiC)
Enzymes [BR:
rban01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
J2J98_29880 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QSY92350
LinkDB
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Position
p5:complement(154132..155964)
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AA seq
610 aa
AA seq
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MNIAAPKLTPVVTTGPLPASSKVVKPGTLYPDLRVPMREISLHPTSGEPPVTVYDSSGPY
TDPQHTVSIDAGLPRLRENWIKARGDVEAYEGRLVKPEDNGFAAGERLTPEFPIRNTPLK
AKTGRAVTQLAYARAGIVTPEMEFIAIRENLGRQAAKEALTRDGESFGADIPDFVTPEFV
RREVAAGRAIIPANINHPESEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAIRWG
ADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLSWEVYRDTLIEQA
EQGVDYFTIHAGVRLAYIPLTVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICEIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWARDCQVMIEGPGHVPMHKI
KENMDKQLKVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRSDVKTGVITYKIAAHAADLAKGHPAARIRDDALSRARFEFRWEDQFNLSLDPETAR
SFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLEAMAARYRDGGDLYMPV
AEAAKPPSGE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgccgcacccaagcttactcccgtggtcaccaccggcccgcttccggcctcg
agcaaggtcgtaaagcccggaacactctatccggatcttcgcgtgcctatgcgggaaatc
agccttcacccgacctcgggcgaaccaccggtcacggtctacgattcctccggtccctat
actgacccgcaacatacggtctcgatcgacgccgggctgccgcgtttgcgcgaaaactgg
atcaaggcgcgtggcgatgtcgaagcctatgaaggccggctggtgaagcctgaagacaat
ggttttgccgcaggcgagcggctgacgccggaattccccattcgcaacacaccgctcaag
gcaaagacgggccgcgccgtcacccagctcgcctatgcgcgtgccggcatcgtcacgccg
gaaatggagttcatcgcgatccgcgaaaacctcggccggcaggccgcgaaggaggcgctg
acccgcgacggcgagagctttggtgctgatattcccgatttcgtcacgcccgaattcgtc
cggcgggaagtcgcggcgggccgggcgatcattccggccaacatcaaccacccagagtcc
gaaccgatgatcatcggccgtaatttcctggtgaagatcaatgccaatatcggcaactcg
gccgtcacctcgtcgatggcggaggaggtggaaaagatggtctgggcgatccgctggggc
gccgacacggtgatggacctttccaccggccgcaacattcacaatatccgggaatggatc
attcgcaattcgccggttccgatcggaacggtgccgctctatcaggcgcttgaaaaggtg
aacggcattgccgaggatctcagctgggaggtctatcgcgatacgctgatcgaacaggcc
gagcagggcgtcgactatttcaccattcatgcgggcgtgcggcttgcctatatcccgctc
accgtcaatcgtgtcaccggcatcgtctcacgcggcggctctatcatggccaagtggtgt
ctgcatcatcacaaggagagctttctctacgagcatttcgaggaaatctgcgagatctgc
cgcgcctacgacgtctccttctcgcttggagacggccttcgccctggctcgatcgccgat
gccaatgacgcagcgcaatttgccgagctcgaaaccctcggcgaactgaccaaaatcgcc
tgggccagggattgccaggtgatgatcgaaggtcccggccacgtgccgatgcacaagatc
aaggagaatatggataagcagctcaaggtttgcggcgaggctcccttctatacgctcgga
cccctgaccaccgacatcgcacctggctatgatcatattacctccggcatcggagccgcg
atgatcgggtggttcggcacagccatgctctgctacgtcacgccgaaggagcatctgggg
ctgccggatcgcagcgacgtcaagaccggcgtcatcacctacaagatcgccgctcatgcc
gccgatcttgccaagggccatccggccgcccgcatccgcgacgacgcgctgtcgcgggca
cgcttcgaattccgctgggaagaccagttcaacctgtctctggatccggaaacggcgcgt
tccttccatgacgagactttgccgaaggaggcgcacaaggtggcgcatttctgctcgatg
tgcggcccgaaattctgttccatgcgtatttcccacgacattcgcgccgaagcccagaaa
gaaggactggaagccatggccgccaggtatcgcgacggcggcgacctctacatgcccgtc
gccgaggccgcgaaaccgccttccggagaatga
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