Rhodothermaceae bacterium RA: AWN76_000070
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Entry
AWN76_000070 CDS
T04780
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03030
DNA replication
rbar03410
Base excision repair
rbar03420
Nucleotide excision repair
rbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWN76_000070
03410 Base excision repair
AWN76_000070
03420 Nucleotide excision repair
AWN76_000070
03440 Homologous recombination
AWN76_000070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbar03032
]
AWN76_000070
03400 DNA repair and recombination proteins [BR:
rbar03400
]
AWN76_000070
Enzymes [BR:
rbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWN76_000070
DNA replication proteins [BR:
rbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AWN76_000070
DNA repair and recombination proteins [BR:
rbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AWN76_000070
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWN76_000070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
MST
HHH_5
DUF3913
Motif
Other DBs
NCBI-ProteinID:
ARA91719
LinkDB
All DBs
Position
11171..14026
Genome browser
AA seq
951 aa
AA seq
DB search
MQQELDFGVTPAGAVPPAPAGDGAGKRLYLLDAMALAYRAHFIFISRPLINSKGQNTSAT
FGFTNALVKLIQDHQMDHMAVVFDVMEEGGTFRDALYDAYKAHRDPPPQELLDNLPMIKE
IVRAMDIPVVEIGGVEADDVIGTLAVRAAADGAEVVIVSPDKDFQQLLGPRISIFRPSYR
GEDFDPITAERFREKYGLEPRQFIDVLALWGDSSDNVPGVPLIGEKTAVKLLQTYPSLED
LIAHADEIGGKRGQNLKDYAEQARISKQLVTIKTDVDIDLDWHTLHRANPDFQRLTALFE
AFEFRRLAQKAREGTLFGAPAADATEAATEAAAGAPAEDVDRSAGPDETLARLDEEQVDY
RIVRNRETLAELAQHLDALEQFAFDTETTSTDPMLAGLVGVSVAWAPRQAWYVPTPLPDG
TPVGAVLEALRPVLARETVRKIGQNLKYDILVLARHGVPVRGPLFDTMVAHYLLAPEEEH
NLDALARKILHYRMVPIERLIGTGKAQKSMVDVPLDEIGPYACEDADITLRLAAPLRDQL
QENGLLEIAETMEFPLIYVLVDMERAGVRIDPAVLQEISAQLDQEMAALEQRIYEVAGET
FNINSTQQLAAILFDKLGLQVGARTSTGKPSTKESVLEELSTEHELPGLILDWRKLSKLK
STYVDSLGDLIHPETGRVHTSFNQTITATGRLSSSNPNLQNIPVRTEMGREIRKAFVPAE
GHRLVAADYVQIELRILASMSGDENLIHAFEAGEDIHTATAARVFGVEPEAVTRDQRRKA
KEVNYGIPYGVSAWGLAQRLRCSVSEAQALIDQYQRSYPKVSRFLAEQVERAREKGYVET
KLGRRRFVPGINARNRNERSFYERVAVNMPIQGTQADMIKIAMVRIHEGLRREGLRSRMV
LQVHDELVFEAPEDEVDRLTTLVEEEMVRALPLDVPIEVDIKAADNWLDAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggaactcgacttcggcgtgaccccggccggtgccgtccccccggcgcctgcc
ggtgatggagccggcaaacggctctacctgctcgacgcgatggcgctggcctaccgcgcg
cacttcatcttcatcagccgtcccctcatcaactcgaagggacagaacacctcggccacg
ttcggcttcaccaacgcgctcgtcaagctcatccaggatcatcagatggaccacatggcg
gtggtcttcgacgtcatggaggagggcggtaccttccgcgacgcgctctacgatgcctac
aaggcccatcgcgacccgcccccgcaggagctgctcgacaacctgccgatgatcaaggag
atcgtccgcgccatggacatcccggtcgtcgagatcggcggggtcgaggcggacgacgtc
atcgggaccctggccgtgcgagccgccgccgacggcgccgaggtggtcatcgtctcgccg
gacaaggacttccagcagctgctcggcccgcgcatttccatcttccggccctcgtatcgc
ggggaggacttcgacccgatcacggcggaacgcttccgggagaagtacggcctggagccc
cggcaattcatcgacgtcctcgccctctggggcgatagcagcgacaacgtccccggcgtg
ccgctgatcggggagaagacggccgtgaagctgttgcagacgtacccgtcgctcgaggac
ctgatcgcgcacgccgacgagatcggcggcaagcgcggacagaacctgaaggactatgcc
gaacaggcccgtatcagcaagcaactcgtcacgatcaagacggacgtcgacatcgacctg
gactggcacacgctgcaccgggccaaccccgacttccagcggctgacggcgctcttcgag
gcgttcgagtttcgccgcctggcgcagaaggcgcgggaggggacgctcttcggggccccg
gccgccgacgccacggaggccgccacagaggccgccgcgggggcgccggccgaggacgtg
gaccggagcgccggcccggacgagacgctggcccggctcgacgaggagcaggtcgactac
cgcatcgtgcgcaaccgcgagacgctggcagaactggcgcagcatctggacgcgctcgaa
cagttcgccttcgacacggagacgacctccacggacccgatgctggccgggctggtcggg
gtgtcggtggcctgggcgccgaggcaggcctggtacgtcccgaccccgctgccggacggc
acgccggtgggggccgtgctggaggcgctgcggccggtgctcgcgcgtgagacggtgcgc
aagatcgggcagaacctgaagtatgatatcctcgtgctcgcccggcacggcgttccggtg
cgcgggccgctcttcgacacgatggtggcgcattacctgctggccccggaggaggaacac
aacctggacgcgcttgcccggaagatcctgcactaccgcatggtgcccatcgaacggctc
atcggcacgggcaaggcacagaagtcgatggtcgacgtgcccctcgatgagatcgggccg
tatgcctgtgaggatgccgacatcacgttgcgcctcgccgctccgctgcgcgatcagttg
caggagaacggcctcctggagatcgccgagacgatggaatttccgctgatctacgtcctg
gtggacatggagcgggccggcgtgcgcatcgacccggcggtgctgcaagagatctcggcc
cagctcgatcaggagatggcggccctggagcagcggatctacgaggtggccggcgagacg
ttcaacatcaactccacgcagcaactggcggcgatcctcttcgacaaactcggcctccag
gtgggggcgcggacctcgaccgggaagccctccacgaaggagagcgtgctggaggaactc
tcgaccgaacacgagctccccgggttgatcctggactggcgcaagctctcgaagctcaag
agcacgtacgtcgacagcctcggcgatctcatccaccccgagacggggcgcgtccacacc
agcttcaaccagaccatcaccgccacggggcgcctgtcctcctccaatcccaacctccag
aacatcccggtccgcaccgagatggggcgggagatccgcaaggccttcgtgccggccgag
gggcaccggctcgtggctgccgactacgtgcagatcgaattgcgcatcctggcctcgatg
agcggcgacgagaacctgatccatgcgttcgaggcgggcgaggacatccacacggcgacg
gcggcgcgggtctttggcgtcgagcccgaagccgtcacccgcgaccagcgccgcaaggcg
aaggaggtcaactacggcatcccctacggcgtctcggcctgggggctggctcagcgcctg
cgctgctccgtcagcgaggcgcaggcgttgatcgaccagtaccagcggtcctacccgaag
gtctcccgcttcctggccgagcaggtcgagcgtgcccgcgaaaagggctacgtggagacg
aagctggggcggcggcgcttcgtgcccggcatcaacgcgcgcaaccgcaacgagcggtcg
ttctacgagcgcgtcgccgtcaacatgccgatccaggggacgcaggcggacatgatcaag
atcgccatggtgcggatccacgagggcctccggcgggaggggctgcgaagccggatggtg
ctccaggtgcacgacgaactcgtcttcgaagcccccgaggacgaggtcgaccgcctcacg
accctcgtggaggaggagatggtccgtgccctcccgctcgacgtccccatcgaagtggac
atcaaggccgccgacaactggctggatgcgcattga
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