Rhodothermaceae bacterium RA: AWN76_000585
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Entry
AWN76_000585 CDS
T04780
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWN76_000585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbar03021
]
AWN76_000585
03400 DNA repair and recombination proteins [BR:
rbar03400
]
AWN76_000585
Enzymes [BR:
rbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWN76_000585
Transcription machinery [BR:
rbar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWN76_000585
DNA repair and recombination proteins [BR:
rbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWN76_000585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF6415
Motif
Other DBs
NCBI-ProteinID:
ARA91812
UniProt:
A0A1V0D9X1
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All DBs
Position
120151..121131
Genome browser
AA seq
326 aa
AA seq
DB search
MSNYAIQMPDGVQVEEATGTYGRFAVQPLERGYGVTIGNALRRVLLSSLQGVAITAIKID
GVQHEFSTIPGVTEDVAEIILNLKGVRFKANEATDSNIHLVLEGPRDFTAADIGEATNDY
EVLNPEHHIATLAEDARLSIELRMGRGRGYVPADENKQADDPIGIIAIDAIFTPIVNVKY
VVKPTRVGQKIDYERLVLEVMTDGSVEPEEALAQAAAILRDHVNLFIQMDSEPQPAPEEK
EVDAEVQRIRELLAQPVDELDLSVRAHNCLKAANIKNIGDLVRREESEMLKFRNFGRKSL
MELVQVLDERGLHFGMDVEKYMEKTP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacgcgattcagatgccggacggtgtccaggtcgaagaagccaccggaacc
tacggacggttcgcggtgcagcccctggagcgtggttacggcgtcaccatcggcaatgcg
ctgcggcgggtgctgctgtcctcgctgcaaggcgtcgccatcacggcgatcaagatcgat
ggcgtccaacacgagttctcgaccatccccggcgtcacggaggacgtggcggaaatcatc
ctgaacctgaagggcgtccgcttcaaggccaacgaagccacggacagcaacatccatctc
gtcctggaaggcccgcgtgacttcaccgccgccgacatcggggaggctacgaacgactac
gaggtgctcaacccggagcatcacatcgccacgctggccgaggatgcccgtctcagcatc
gaactgcgcatgggccgcggtcgcggttacgtcccggccgatgaaaacaaacaggccgac
gatcccatcggcatcatcgccatcgacgcgatcttcacgcctatcgtgaacgtgaagtac
gtcgtcaagccgacccgcgtcgggcagaagatcgactacgagcgcctggtgctggaggtc
atgacggacggctcggtggagccggaggaagcgctcgcccaggctgccgccatcctgcgc
gatcacgtcaacctcttcatccagatggacagcgagccgcagcccgcgccggaggagaaa
gaggtcgatgccgaggtgcagcgcatccgtgaactgctggctcagccggtggatgaactg
gacctctcggtgcgtgcgcacaactgcctcaaggccgccaacatcaagaacatcggcgac
ctggtgcggcgtgaagagtccgaaatgctgaagttccgcaacttcgggcgcaagtcgctc
atggaactggtgcaggtgctcgatgaacggggactgcacttcggcatggacgtcgaaaag
tacatggagaaaaccccctaa
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