Rhodothermaceae bacterium RA: AWN76_001780
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Entry
AWN76_001780 CDS
T04780
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03030
DNA replication
rbar03430
Mismatch repair
rbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWN76_001780
03430 Mismatch repair
AWN76_001780
03440 Homologous recombination
AWN76_001780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbar03032
]
AWN76_001780
03400 DNA repair and recombination proteins [BR:
rbar03400
]
AWN76_001780
Enzymes [BR:
rbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWN76_001780
DNA replication proteins [BR:
rbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWN76_001780
DNA repair and recombination proteins [BR:
rbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWN76_001780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
UVR
GIY-YIG
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ARA92021
LinkDB
All DBs
Position
411623..413323
Genome browser
AA seq
566 aa
AA seq
DB search
MRLQDVTFVVTDTETTGGKAGADRVIELAAVKVRGGAVVDRFSQLINPERSIPRRITEIT
GITTGMVFNQPVAAEVFPEYLDFLGEAVFVAHHASFDLGFINAELERMGAPALANPVLCT
LRLARRLLAGLRSKGLGSVAAFYGITIDGRHRALGDAEATAQVLLRFLEQLAGEHELETL
DDLLAFQHRTYARAAGRREPAYLRRIREEVLPALPPRPGVYFLKDRRGAILYIGKARRLS
DRVRSYFTAIEAHPPRIRRLVEAVRDVAWEETGSELAALLRESRLIKEHQPRFNRALRHE
RSRPFIRLDTTEPFPRVSWTSYLRNDGAEYFGPLGGRRQAEQVVDLIHRFFKLRECDDDT
FARGRACLYAELDRCGVPCEGGAAAEHYAREVEQVRAFLTGRDTSVQQRIEEAMHRAARA
LDFEAAARYRDGLHRLRRLQEKQQCIAASVLDHHAVLLQPGLQPHRVQLFLVRYGRLVDT
VTMPRRPASPDVDALKGKLAKWFGTTQVEPERYLKKEVDEVRILAHWMYVHREDAHQIQW
HPGMTVEALLAGILDRLASEAAGAVR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctccaggacgtcaccttcgtcgtcaccgacaccgagacgaccggcggcaaggcc
ggagccgaccgggtgatcgaactggcggcggtgaaggtgcggggcggtgccgtggtggat
cgcttctcccagctcatcaaccccgagcgctccatcccgcggcgcatcaccgagatcacc
gggatcaccacggggatggtcttcaaccagcccgtcgccgccgaggtcttcccggagtat
ctcgacttcctgggcgaggccgtcttcgtggcccatcacgcctcgttcgatctgggcttc
atcaacgccgagctggagcggatgggcgcaccggcgctggcgaacccggtgctgtgtacg
ctgcggctggcccggcgcttgctggcggggttgcgctcgaagggcctcggcagcgtggcc
gccttctacggcatcaccatcgacggccgccacagggcgctgggcgatgcggaggcgacg
gcgcaggtgctcctgcgcttcctggagcagctcgccggggagcatgagctggagacgctc
gacgacctgctggccttccagcatcggacctatgcccgcgccgcgggccggcgggagccg
gcctacctgcgccggatccgggaagaggtgctgccggctctgccgccccggccgggcgtc
tatttcctgaaagatcggcggggcgcgatcctctacatcggcaaggcccggcggctgagc
gaccgggtgcgtagctatttcaccgccatcgaggcacacccgccgcgcatccgccggctc
gtcgaggccgtgcgtgacgtggcctgggaagagacgggctccgaactggccgcgctcttg
cgggagtcgcgcctcatcaaagagcatcagccccgcttcaaccgggcgctccggcacgag
cgcagccgccccttcatccgcctggataccaccgagccgttcccacgggtcagctggacg
tcctacctgcgcaacgacggggcggagtacttcggcccgctcggcggccggcggcaggcc
gagcaggtggtcgatctgatccaccgctttttcaagctgcgggagtgcgacgatgacacc
tttgcccgcggccgggcctgcctctatgccgagctggatcgctgcggcgtgccctgtgaa
ggcggcgcggcggccgagcactacgcccgtgaggtcgaacaggtgcgcgccttcctgacc
gggcgcgacacgtccgtgcagcagcggatcgaggaggccatgcaccgggccgcccgggcc
ctggatttcgaggccgccgcccgctaccgtgacgggctgcaccggctgcggcgtcttcag
gaaaagcagcagtgcatcgccgcctccgtgctggatcaccatgccgtgctcctgcagccc
gggctgcagcctcaccgcgtgcagctcttcctggttcgctacggccgcctggtcgatacc
gtgacgatgccacgccgccccgcctcgcccgacgtggatgcgctgaaagggaaactggcc
aagtggttcggcacgacacaggtcgagccggagcgttatcttaaaaaggaagtcgacgag
gttcggattctggcgcactggatgtacgtgcatcgggaggacgcccatcagattcagtgg
caccccggcatgacggtggaggcgctgctggccggcatcctggaccgcctggcgagcgag
gcggcgggcgcggtgcggtga
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