Rhodothermaceae bacterium RA: AWN76_001935
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Entry
AWN76_001935 CDS
T04780
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03030
DNA replication
rbar03430
Mismatch repair
rbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWN76_001935
03430 Mismatch repair
AWN76_001935
03440 Homologous recombination
AWN76_001935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbar03032
]
AWN76_001935
03400 DNA repair and recombination proteins [BR:
rbar03400
]
AWN76_001935
Enzymes [BR:
rbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWN76_001935
DNA replication proteins [BR:
rbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWN76_001935
DNA repair and recombination proteins [BR:
rbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWN76_001935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CAF1
Motif
Other DBs
NCBI-ProteinID:
ARA92050
LinkDB
All DBs
Position
complement(449304..449972)
Genome browser
AA seq
222 aa
AA seq
DB search
MRLALQRWWYRRRLPSGPLRTLLEASLPDRSRVVAATSFLAIDLETTGLDARTDQIVSIG
SVPIVEGRIRLSEARYRVLRIEGSVNRSATIHGLRDRDVQHGEALEDVLPGLLNQLTDAV
LLSHHAPFDLAFLNAACRRLYGGPLLVPVTDTLTLARTALHVRGVAVPKGGFRLAALRAR
YGLPPLQAHHALADALAAAELFLALIAHQGGTDRVRLGDVLR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgccctccagcggtggtggtaccgccggcgtctgccgtccggccccctccgc
acgctgctcgaagcctccctgcccgaccgctcccgcgtcgtcgcagccacctcgttcctg
gccatcgacctggaaaccaccgggctcgatgcccgaaccgatcagatcgtcagcatcggc
agcgtccccatcgtcgaggggcgcatccggctgtccgaggcccggtaccgggtgctgcgg
atcgagggctcggtaaaccgcagcgccaccatccacggcctgcgggaccgggacgtgcag
cacggcgaggcgctggaagacgtgttgcccggcctgctgaaccagctcaccgatgcggtc
ctcctgtcccatcacgcccccttcgacctcgccttcctgaacgccgcctgccgccggctt
tacggaggacctctcctcgtgcccgtgaccgatacgctgacgctggcccgtaccgccctg
cacgtccggggcgtagccgtcccgaaaggcggattccgcctggccgcgttgcgcgcgcgc
tacggtctacctcccctgcaggcgcatcacgccctggctgacgccctggccgccgccgaa
ctcttcctggcgctcatcgcccaccagggcggcacggaccgcgtccggctgggcgacgtg
ctgcgatga
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