Rhodothermaceae bacterium RA: AWN76_005925
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Entry
AWN76_005925 CDS
T04780
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWN76_005925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbar03021
]
AWN76_005925
03400 DNA repair and recombination proteins [BR:
rbar03400
]
AWN76_005925
Enzymes [BR:
rbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWN76_005925
Transcription machinery [BR:
rbar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWN76_005925
DNA repair and recombination proteins [BR:
rbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWN76_005925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Peptidase_M23
RnfC_N
Apocytochr_F_C
TPR_AP5Z1_C
Motif
Other DBs
NCBI-ProteinID:
ARA92750
UniProt:
A0A1V0DCL1
LinkDB
All DBs
Position
complement(1422043..1426350)
Genome browser
AA seq
1435 aa
AA seq
DB search
MPYGKTQKIKKNFSSITVSLASPESILERSYGEVLKPETINYRSFKPEKDGLFCEKIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTQKAVRRERMGHITLSVPVVHIWYFKTLPNKI
GHLLGMKSKDLEKVIYYENYVVIQPGGAATLGIEEKQLLTEDEYYNVLYQIREDNNRLDD
DDPEKFIAMIGGEAVETMLKRLDLPALSQQLRFQVKTETSQQRKAEALKRLSIVEAFRDA
NRRMENRPEWMVLRVIPVIPPELRPLVPLEGGRFATSDLNDLYRRVIIRNNRLKRLIDIK
APEVILRNEKRMLQEAVDSLFDNSRKANAVRSDSNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELELHQCGLPKEMAVELFKPFIIRKLIERGIVKTVKSAKKVVDRRTA
DVWDILEKVIAGRPVMLNRAPTLHRLGIQAFQPVLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLSHDACLEAMVLMLASHNILSPAHGGPIAVPTQDMVLGLYYMTKAKSGVKGSGRL
FSSLAEVRQAYDQKTVALHAKIKVRLPDGELIETTVGRVLFNEVVPEGVGFINEVLTKKN
LRGIIGRVLKATGFPKTARFLDDIKELGFEQATAAGLTFSLADIVVPEAKNTLISQANEE
VERARNNYAMGFITENERYNQVIDIWTRTNNRVSEVLFDTLKNDQEGFNAIFMMADSGAR
GSKEQIRQLGGMRGLMAKPQKSLVGSAGEIIENPIISNFKEGLSVLEYFISTHGARKGLA
DTALKTADAGYLTRRLVDVAQDVTVTEHDCGTLRGIKISALKDNEEVVEPLADRILGRVS
VHDVFDPLTGDLIVSANELIDEEKARRVAETSIEEVEIRSALTCETRRGVCALCYGRNLG
SGRLVEVGEAVGVIAAQSIGEPGTQLTLRTFHIGGAASRIEAESTIKSKFAGRVKFESLR
TVTFEDVEGPREVVLARQGEILVMDPEEEGRQLISYVIPYGAEVMVEDGQLVEKGQVLAS
WDPYNSVILSEVSGEVAFQDIIEGTTYREESDEQTGYKEKVIIESRERNLTPAILVGGGD
KPAREYTLPVRARLQVDEGDQVQAGQVLAKIPRQSAKTRDITGGLPRVTELFEARTPSDP
AVVSEIEGVVTFGGRKRGAQEVIVTSRDGVISKTYLVPLSKHLFVHENDYVRAGEPLSDG
QVAPHDILRILGPRRVQEYLVNEIQEVYRLQGVAINDKHIEVIVRQMMQKVNITDPGDTP
FLEQDLVDRFVLEQTNDDLYDKFVVTDPGDSGLQVGDIIDRRRLREVNSEMKRGDKRQVQ
VREAQPAVAEPVLLGITQASLATDSFVSAASFQETTKVLTEAAIQAKVDPLYGLKENVIV
GHLIPAGTGQRRFRDIVVGSKKELAELQAALGGGRDLGEAAGEDDGASESVEASS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgccttacggaaagacgcagaagatcaagaagaacttcagcagcatcacggtcagcctg
gcgtcgcccgagagcattctcgaacgctcctacggcgaggtgctcaagccggagacgatc
aactaccggtcgttcaagccggagaaggacgggctgttctgcgagaagatcttcggcccg
gtcaaagactgggagtgccactgtggcaaatacaagcgcatccgctacaaaggcatcatc
tgcgaccggtgcggggtcgaggtgacgcagaaggcggtgcgtcgggagcggatgggccac
atcacgctcagcgtgccggtggtccacatctggtacttcaagacgctgcccaacaagatc
ggtcacctgctcgggatgaagtcgaaagacctcgagaaggtgatctactacgagaactac
gtcgtcatccagcccggtggggcggccacgctgggcatcgaggagaagcagctcctgacc
gaggacgagtactacaacgtgctctaccagatccgcgaggacaacaaccgcctcgacgac
gacgacccggagaagttcatcgcgatgatcggcggcgaggccgtcgagacgatgctgaag
cggctcgacctgccggcgctctcgcagcagctgcgcttccaggtcaagaccgagacgagc
cagcagcgcaaggcggaggccctgaagcggctgagcatcgtggaggccttccgcgacgcc
aaccgccgcatggagaaccgccccgagtggatggtgctgcgcgtgatcccggtcatcccg
ccggagctgcgcccgctcgtgccgctcgaaggcgggcgctttgcgacgagcgacctgaac
gacctctaccgccgcgtcatcatccgcaacaaccgcctcaagcggctgatcgacatcaag
gccccggaggtcatcctgcgcaacgagaagcgcatgctccaggaggccgtcgacagcctc
ttcgacaacagccgcaaggccaacgcggtgcgctcggactcgaaccgcgcgctcaagagc
ctcagcgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaagcgc
gtcgactactccgggcgctcggtgatcgtcgtcggccccgagctggagctgcatcagtgc
gggctgcccaaggagatggccgtcgagctgttcaagccgttcatcatccgcaagctgatc
gagcgcggcatcgtcaagaccgtcaagagcgccaagaaggtcgtcgatcgccgcacggcc
gacgtgtgggacatcctggagaaggtgatcgccgggcgtccggtgatgctcaaccgcgca
cccacgctgcaccgcctcggcatccaggccttccagccggtgctcatcgagggcaaggcc
atccagctgcatccgctcgtgtgtacggctttcaacgccgacttcgacggggaccagatg
gccgtgcacgtgccgctgagccatgacgcctgcctggaggcgatggtgctcatgctcgcc
agccacaacatcctcagcccggcacacggcggacccatcgccgtgccgacgcaggacatg
gtgctggggctctactacatgaccaaggccaagagcggcgtcaagggcagcggccggctg
tttagcagcctggccgaagtgcgccaggcctacgaccagaaaaccgtcgccctgcatgcc
aagatcaaggttcgcctgcccgacggagagctgatcgagacgaccgtgggacgggtcctc
ttcaacgaagtcgtgcccgagggcgtcggcttcatcaacgaggtcctcacgaagaagaac
ctgcgtggcatcatcggccgcgtgttgaaggcgactggcttccccaagacggcccgcttc
ctggacgacatcaaggaactgggcttcgagcaggccaccgccgccggcctgaccttctcg
ctggcggacatcgtggtgcccgaggcgaagaacacgctcatcagccaggccaacgaggag
gtcgaacgggcccgcaacaactacgcgatgggcttcatcacggagaacgagcgctacaac
caggtcatcgacatctggacgcgcaccaacaaccgcgtctccgaggtgctcttcgacacg
ctgaagaacgaccaggaaggcttcaatgccatcttcatgatggccgactccggggcgcgt
ggctcgaaggagcagatccgccagctcggcgggatgcgcggcctgatggccaagccgcag
aagagcctggtgggctcggccggggagatcatcgagaacccgatcatctcgaacttcaag
gaaggcctctcggtgctggagtacttcatctccacgcacggcgcccgcaagggcctggcc
gacaccgccctgaagacggccgacgccggctacctcacgcgccgcctcgtggacgtcgcc
caggacgtgacggtcaccgagcacgactgcgggacgctgcgcggcatcaagatctcggcg
ctgaaggacaacgaggaggtcgtcgagccgctggccgaccgcatcctgggccgcgtctcg
gtccacgacgtcttcgacccgctgacgggcgacctgatcgtctcggccaacgagctgatc
gacgaggagaaggcccggcgggttgccgagacctccatcgaagaggtcgagatccgctcg
gccctgacgtgtgagacgcggcgcggggtgtgtgccctctgctacggccgcaacctgggc
tccggccgcctggtggaggtgggcgaggctgtcggcgtgatcgccgcgcagtccatcggc
gagccggggacgcagctgacgctgcggaccttccacatcggtggcgccgccagccgcatc
gaggcggaaagcaccatcaagtcgaagttcgccggacgcgtcaagttcgagagcctgcgg
accgtgaccttcgaggacgtcgaaggcccgcgcgaggtcgtgctggcccggcagggtgag
atcctggtgatggaccctgaggaggaaggccgccagctgatctcctacgtgatcccgtac
ggcgccgaggtgatggtcgaggacgggcagctcgtcgaaaaaggccaggtgctggccagc
tgggacccgtacaactcggtcatcctctcggaagtcagcggcgaggtggccttccaggac
atcatcgaaggcacgacctaccgcgaggagtcggacgagcagaccggctacaaggagaag
gtcatcatcgagagccgcgagcgcaacctgacgcccgccatcctcgtcggggggggcgac
aaaccggcgcgggagtacacgctgccggtacgggcccgtctccaggtggacgagggcgac
caggtgcaggccggtcaggtgctcgccaagatcccgcgccagtccgccaagacgcgcgac
atcaccggcggtctgccgcgtgtgacggagctgttcgaggcccgcacgccgtcggacccg
gccgtggtcagcgagatcgagggcgtcgtcaccttcggcggccgcaagcgcggcgcgcag
gaggtcatcgtcaccagccgcgacggggtcatctcgaagacgtacctcgtcccgctctcg
aagcacctgttcgtgcacgaaaacgactacgtgcgtgccggtgagccgctctcggacggc
caggtcgccccgcatgacatcctgcggatcctcggtccccgccgggtgcaggagtacctc
gtcaacgagatccaggaggtctaccgcctccagggtgtggcgatcaacgacaagcacatc
gaggtgatcgtccggcagatgatgcagaaggtgaacatcaccgacccgggcgacacgccg
ttcctcgagcaggacctcgtcgaccgcttcgtcctggagcagaccaatgacgacctctac
gacaagttcgtcgtgacggacccgggggactccggcctgcaggtcggagacatcatcgac
cggcgacggctgcgggaggtcaactccgagatgaagcgcggggacaagcgccaggtgcag
gtgcgcgaggcgcagccggccgtggccgaaccggtgctgctcggcatcacgcaggcctcg
ctggctaccgactcgttcgtgtccgcggcgtccttccaggagacgacgaaggtcctcacc
gaggcggccatccaggccaaggtggacccgctctacggcctgaaggagaacgtgatcgtc
gggcacctcatcccggccggtacgggccagcgccgcttccgcgacatcgtcgtgggctcg
aagaaggagctggccgaactgcaggccgccctcggcggtggccgcgacctgggtgaggcc
gcaggcgaagacgatggcgcctccgagtcggtggaagcgtcgtcctga
DBGET
integrated database retrieval system
