Rhodothermaceae bacterium RA: AWN76_008490
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Entry
AWN76_008490 CDS
T04780
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03420
Nucleotide excision repair
rbar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWN76_008490
03430 Mismatch repair
AWN76_008490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbar03400
]
AWN76_008490
Enzymes [BR:
rbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWN76_008490
DNA repair and recombination proteins [BR:
rbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWN76_008490
MMR (mismatch excision repair)
Other MMR factors
AWN76_008490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
DEAD
HHH
Motif
Other DBs
NCBI-ProteinID:
ARA93191
UniProt:
A0A1V0DDR9
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All DBs
Position
complement(2098113..2100182)
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AA seq
689 aa
AA seq
DB search
MARRFVLKPDPPADHPPLTLDYAGDLNPQQHAAATAPGGPVLVVAGAGTGKTRTLIYRLA
YLVETGTPPEQIVLLTFTRRAAREMLTRAAALLDGRCSRVQGGTFHAFCLAILRQHAPRL
GLPAHFTILDAADAADVLDVLRTARGLHRAARRFPRKRTLQAIFSAATNRGLALEEILAE
SYPQFEAYRDTLDALQQDYADYKQRHGLLDYDDLLHRTLTLFERHPDVRDQVSARCRHVL
VDEYQDTNRLQAALVTQFAHVHGNVMAVGDDAQSIYRFRGADFRNIFAFPERFPGTRVLK
LEHNYRSTQPILDLANHVLGRATRKYEKHLFTDVRGGEPPALVPAPDARYEARFVAQVVL
ELREQGVPLRRIAVLFRSSANAYELEVELNRRNIPFVKYGGLKLSEAAHIKDLVAHLRVL
ENPQDAVAWNRILQLLEGIGPKTAADLIAWLTAARDDPFRLEERPFAPRYVEALKALFET
LRAARQPGVPLPAQVERLVAYYEPICRRVYYEDYPRRLQDLEHFLALAEHAGDRAAFLAS
LALDPVELTALEAEARADDEPPLVLSTIHSAKGLEFNTVFVIHALDGVLPSGYALKDPDA
LDEELRLLYVAVTRAEERLFITYPMLRYQRYQGEYLTRPSRFIDGVPERLLEPWTLVEEG
PPALPDAAPPELPGPSGGPDAEPDDGLPF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgcttcgtcctcaagcccgatcccccggcggatcacccgcccctgacgctc
gattacgccggtgacctgaatccgcagcaacatgcggcggccacggcgcccggcggcccc
gtgctggtcgtggccggcgcggggacgggcaagacgcgcacgctgatctaccggctcgcc
tatctggtggagacgggtacgccaccggagcagatcgtgctgctgaccttcacgcggcgc
gcggcgcgggagatgctcacgcgggcggctgcgctgctggacggccggtgcagccgcgtc
cagggcggcacctttcatgccttctgcctggcgatcctccgccagcacgccccccgcctg
ggcctgcccgcgcactttaccatcctggatgccgccgacgccgccgacgtgctggacgtg
ctccgtacggcgcgggggctccaccgggcggcccggcggtttccccgcaagcgcaccctc
caggcgatcttctccgccgccaccaaccgcggcctcgccctcgaagagatcctggccgaa
agctacccgcagttcgaagcctaccgcgatacgctcgacgccctgcagcaggactacgcc
gactacaagcaacgccacggcctgctcgactacgacgacctgctgcaccgcaccctgacg
ctgttcgaacgccacccggacgtccgcgaccaggtcagcgcccgctgccggcacgtgctg
gtcgacgagtaccaggacaccaaccgcctgcaggccgcgctcgtgacgcagttcgcgcac
gtgcacggcaacgtcatggccgtgggggacgatgcccagagcatctaccgcttccgcggg
gccgacttccgcaacatcttcgccttccccgagcgcttccccggtacccgggtcctcaaa
ctggaacacaactaccgctccacccagcccattctcgacctggccaaccacgtgctgggg
cgggccacgcggaagtacgagaagcacctgttcaccgacgtccgcgggggcgagccgccg
gccctcgttccggccccggatgcgcgctacgaggcccgcttcgtcgcgcaggtcgtgctg
gaactgcgcgagcagggcgtgccgctgcgccggatcgccgtgctgtttcgcagcagcgcc
aatgcctacgaactggaggtggaactgaaccggcgcaacatccccttcgtgaagtacggc
ggcctcaagctcagcgaggcggcccacatcaaggacctcgtcgcccacctgcgcgtgctg
gagaacccgcaggacgccgtcgcctggaaccgcatcctccagctgctggaaggcatcggg
ccgaagacggcggcagacctgatcgcgtggctcaccgcggcgcgcgacgacccgttccgg
ctcgaagagcggccgtttgccccgcgctacgtcgaggcgctcaaggcgctgttcgagacg
ctccgggccgcgcggcagcccggcgtgccgctgcccgcgcaggtcgagcggctcgtggcc
tactacgagccgatctgccggcgggtctactacgaggactatccgcggcgcctgcaggac
ctggagcatttcctggcgctggcggagcacgccggagaccgcgccgccttcctggcctcg
ctcgccctcgatccggtggagctgacggccctggaggccgaggcccgggccgacgacgag
ccgccgctcgtgctctcgaccatccactccgccaaggggctcgagttcaacacggtgttc
gtgatccacgccctggacggggtgctgccctccggctatgcgctgaaagacccggacgcg
ctggatgaagagttgcgtctgttgtacgttgccgtcacccgggccgaggagcgcttgttc
atcacctacccgatgctgcgctatcagcggtaccagggcgaatacctgacgcgaccctcc
cggttcatcgacggcgtgccggagcggttgctcgaaccctggacgctggtggaggagggg
cctcccgcgctgcccgacgccgcaccgcccgagttgcccggcccctctggcggccccgac
gccgaacccgacgacggccttcccttttaa
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