Rhodothermaceae bacterium RA: AWN76_010700
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Entry
AWN76_010700 CDS
T04780
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWN76_010700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbar03019
]
AWN76_010700
03110 Chaperones and folding catalysts [BR:
rbar03110
]
AWN76_010700
03029 Mitochondrial biogenesis [BR:
rbar03029
]
AWN76_010700
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbar04147
]
AWN76_010700
Enzymes [BR:
rbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AWN76_010700
Messenger RNA biogenesis [BR:
rbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AWN76_010700
Chaperones and folding catalysts [BR:
rbar03110
]
Heat shock proteins
HSP60 / Chaperonin
AWN76_010700
Mitochondrial biogenesis [BR:
rbar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AWN76_010700
Exosome [BR:
rbar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AWN76_010700
Exosomal proteins of other body fluids (saliva and urine)
AWN76_010700
Exosomal proteins of breast cancer cells
AWN76_010700
Exosomal proteins of colorectal cancer cells
AWN76_010700
Exosomal proteins of bladder cancer cells
AWN76_010700
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF6162
REF
Motif
Other DBs
NCBI-ProteinID:
ARA93580
UniProt:
A0A1V0DEZ3
LinkDB
All DBs
Position
2597937..2599565
Genome browser
AA seq
542 aa
AA seq
DB search
MAKQITFNTEARNALKRGVDSLANAVKVTLGPKGRNVIIEKKFGAPTVTKDGVTVAKEIE
LENKLENVGAQMVKEVASKTSDVAGDGTTTATVLAQAIMTAGLKNVAAGANPMDLKRGID
AAVQAVVANLRAQSREIESKNEIAQVATISANNDATIGELIADAFDRVGKDGVITVEEAK
GTETTLEVVEGMQFDRGYLSPYFVTDPEKMEAVLEDAYILIHDKKISSMKDLLPILEKVA
QMGAPLLVIAEDVEGEALATLVVNKLRGTLKVAAAKAPGFGDRRKAMLEDIAILTGGTVI
SEEKGYRLENATLDYLGRAKRVVLDKDTTTIVDGAGDAAQIKARVNQIRQQIETTTSDYD
REKLQERLAKLSGGVAVLKIGAATEPEMKEKKARVEDALHATRAAVEEGIVPGGGVALIR
GLSALDDLTVDNEDQEIGVTIVRRALEEPLRQIAANAGWEGSVVVQRVKEGEGDFGFNAR
TEEYGNLIEQGVIDPTKVVRTALENAASVSGLLLTTESVIYEKPEKQKAAPAMPGGMDDM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagatcacattcaacaccgaggcccgcaacgcgctcaagcgcggcgtcgac
agcctcgccaacgccgtcaaggtcacgctcggccccaaaggccggaacgtcatcatcgag
aagaaattcggcgcccccacggtgaccaaggacggcgtcaccgtcgccaaagagatcgaa
ctcgagaacaagctcgagaacgtcggcgcgcagatggtcaaggaggtcgcctcgaagacg
agcgacgtggccggtgacggcaccacgacggccaccgtgctggcgcaggccatcatgacg
gccgggctgaagaacgtcgccgccggcgccaacccgatggacctcaagcgcggcatcgac
gccgccgtgcaggccgtcgtggccaacctgcgggcgcagagccgcgagatcgagtcgaag
aacgagatcgcgcaggtggccaccatctcggccaacaacgacgccacgatcggcgagctc
atcgccgacgccttcgaccgcgtgggcaaggacggcgtcatcacggtcgaggaagccaaa
ggcaccgagacgacgctcgaggtggtcgaggggatgcagttcgaccgcggctacctctcg
ccctacttcgtcaccgatccggagaagatggaggccgtcctggaggatgcctacatcctg
atccatgacaagaagatctcctcgatgaaggatctgctgccgatcctggagaaggtggcg
cagatgggggccccgctgctggtgatcgccgaggacgtcgagggcgaggcgctggcgacg
ctcgtggtgaacaagctgcgcggcacgctgaaggtggccgcggcgaaggcgccgggcttc
ggggatcgccgcaaggcgatgctcgaggacatcgcgatcctgaccggcggcacggtgatc
tcggaggagaagggctaccgcctggagaacgcgacgctggactacctgggccgcgccaag
cgcgtggtgctggacaaggacacgacgacgatcgtggacggggccggggacgcggcgcag
atcaaggcgcgcgtcaaccagatccgccagcagatcgagacgacgacgtcggactacgac
cgggagaagctgcaggagcgtctggcgaagctctcgggcggggtggccgtgctgaagatc
ggtgcggcgaccgagccggagatgaaggagaagaaggcgcgcgtggaggacgcgctgcac
gcgacgcgggcggccgtcgaggaaggcatcgtccccggtggcggcgtggcgctcatccgc
ggcctctcggcgctggatgacctgacggtggacaacgaggatcaggagatcggcgtgacg
atcgtgcggcgggcgctcgaagagccgctgcggcagatcgcggccaacgccggctgggaa
ggctccgtcgtggtgcagcgcgtgaaggagggcgaaggcgacttcggcttcaacgcgcgc
acggaggagtacggcaacctgatcgagcagggcgtgatcgacccgacgaaggtcgtccgc
acggcgctggagaacgccgcctcggtctccgggctgctgctgaccaccgagtcggtcatc
tacgagaagccggagaagcagaaggccgccccggccatgcccggcggcatggacgacatg
gacttctga
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