Rhodothermaceae bacterium RA: AWN76_012890
Help
Entry
AWN76_012890 CDS
T04780
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03410
Base excision repair
rbar03430
Mismatch repair
rbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWN76_012890
03430 Mismatch repair
AWN76_012890
03440 Homologous recombination
AWN76_012890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbar03400
]
AWN76_012890
DNA repair and recombination proteins [BR:
rbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AWN76_012890
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWN76_012890
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWN76_012890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ARA93961
UniProt:
A0A1V0DFY5
LinkDB
All DBs
Position
3141591..3143333
Genome browser
AA seq
580 aa
AA seq
DB search
MHTYRWELCHVDRPERVAALQTALNDLPEALARCLVLRGIDSLEAARRFFRPALKHLHDP
FLMQDMTAAAERVARAVRRRERVLVYGDYDVDGTSATALMTTFLRRQGLDVDYFIPNRFT
DGYGLGRAGIDAAAEQGAALIIALDCGITATEEADYARARGLDLIICDHHTAHDALPRAV
AVLDPKRPDCAYPFKELSGCGVGFKLVQATLTTLGRDPDEAMDLLDLVAVSIASDIVPVV
GENRLLMQEGLQRLAERPRPGLRALARQAGLDLDAVSTERIVFGLGPRINAAGRLGDAAE
AVELLLTDDPARADELAKKLEAINEQRRRIDLQTRDEAIEQAKRHLSGRMRHALVLHKAD
WHQGVIGIVASRVLERYHRPTVMLCTVDGAAKGSARSIDGLNIFEALQSCADLLTRFGGH
AHAAGLTLPVENISAFRDRLDDVVEAAMTPDMLIPTKSYDAGLHLADIDGRFWAVLRQFA
PHGPGNLTPVFRGTNLQVAGEPRLVGTDQRHLRFAVRQSSPDGDVCLPVIGFDLHRHLPL
LQQSRRQGRPFEMLFSINENTWRGRTTLQLQARDLHSADG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgtaccgctgggagctgtgccacgtcgaccgccccgagcgcgtcgccgcgttg
cagacggccctgaacgacctgcccgaagccctggcccgctgcctcgtgctgcgtggcatc
gacagcctggaggccgcccggcgtttcttccgcccggccctgaagcacctgcacgacccg
tttctgatgcaggacatgacggccgccgccgagcgggtggcccgggccgtccgccgccgt
gagcgcgtgctggtctatggcgactacgacgtggacggcacctcggccacggcgctgatg
accaccttcctgcggcgccaggggctagacgtcgactacttcatccccaaccgcttcacc
gacggctacggcctcggccgggccgggatcgacgcggcggccgagcagggcgccgcgctc
atcattgccctcgattgcggcatcaccgccaccgaggaggccgactatgcccgggcgcgc
gggctcgacctcatcatctgcgaccaccacaccgcccacgacgccctcccccgcgccgtc
gccgtcctcgaccccaagcgccccgattgtgcctatcccttcaaggaactctccggctgt
ggggtcgggttcaagctggttcaggccacgctgaccacgctcggccgggaccccgacgag
gcgatggacctgctcgacctcgtcgccgtctccattgccagcgacatcgtgccggtggtg
ggggagaaccgcctcctcatgcaggagggcctgcagcggctcgccgaacggcctcgtccg
ggcctgcgtgccctcgcccggcaggccggcctcgacctcgacgccgtctccaccgagcgc
atcgtcttcggccttggcccgcgcatcaacgccgccggtcgcctcggggatgccgcggag
gccgtggaactcctgctgaccgacgacccggcccgtgccgacgagctggcgaagaagctg
gaagccatcaacgagcagcgccgccgcatcgacctgcaaacgcgcgatgaggcgatcgag
caggccaaacgacacctcagcgggcggatgcgccacgccctcgtgctgcataaggccgac
tggcaccagggcgtcatcgggatcgtggccagccgggtgctggagcggtaccatcgcccc
accgtcatgctctgcacggtcgacggcgcggccaaagggtcggcacgttccatcgacggc
ctcaacatcttcgaagccctccagtcctgtgcggacctgctgacccgcttcggcgggcac
gcccacgccgccggcctgacgctgcccgtggaaaacatctctgccttccgggatcgcctc
gacgacgtggtggaagccgccatgacgcccgacatgctgatccccacgaagtcgtacgac
gccggcctgcacctggccgacatcgacgggcgcttctgggcggtgctccggcagtttgcc
ccccacggccccggaaacctgacccccgtctttcgtgggacgaacctgcaggtggccggc
gagccccgcctcgtcgggaccgaccagcggcatctgcgcttcgcggtgcgccagagcagc
ccggacggcgacgtgtgcctgccggtgatcggcttcgacctgcatcggcatctccccttg
ttgcaacagagccgccggcagggacgccccttcgagatgctcttctcgatcaacgaaaac
acgtggcgtggccggacgaccctccagctccaggcccgcgatctgcattcggcagacggg
taa
DBGET
integrated database retrieval system
