Rhodothermaceae bacterium RA: AWN76_014165
Help
Entry
AWN76_014165 CDS
T04780
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWN76_014165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbar03021
]
AWN76_014165
03019 Messenger RNA biogenesis [BR:
rbar03019
]
AWN76_014165
Transcription machinery [BR:
rbar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AWN76_014165
Messenger RNA biogenesis [BR:
rbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AWN76_014165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
OB_RNB
AAA
Motif
Other DBs
NCBI-ProteinID:
ARA94186
UniProt:
A0A1V0DGM6
LinkDB
All DBs
Position
complement(3517512..3519545)
Genome browser
AA seq
677 aa
AA seq
DB search
MKISALQEKKLAELREIAREMDLSGYSGMRKQDLIYLILEAQAEAAAGNAPSRPRRAPAP
RKREATARATRSQKNGTSADASQEATPEAAPEAASPDRPARSRPQATPGHAGASSREADT
TTRDEAVPTAEQPQARAARQARSEGRSRRSQRDERTRGDDRRKRNEGRSSSGESDDERTR
AEAGRDAPNDRRTSASDDRGDDNDRGNRDDRRSRRSRGRGRGRNRGERNDSSRSERGDGN
RGDSSRSERGDGNRGERGDGNRGERGDGNRGERGDRSDGNRDDRRQRIYEGRPAYMAQYD
PNKTELEGMIRKVGVLEILPDGYGFLRSPEYNYLPSPDDIYVSPSQIKRFSLKLGDTVDG
EVRPPKEGERFFALIQVNTINGRRPSELEERPSFDYLTPLYPEKHLRLETKPSEFSTRIL
DLFSPIGKGQRGLIVAQPKTGKTILLQKIANAIAENHPECYLIILLVDERPEEVTDMIRN
VQAAEVIASTFDQEPERHVEVANIVLEKAKRLVEAGQDVVILLDSITRLARAHNAVAPSQ
GRTMSGGIEAGALRGPKRFFGAARNVEEGGSLTIIGTALIDTGSRMDEVIFEEFKGTGNM
ELVLNRSLADRRVFPAIDVVKSGTRREELLLPDVMLSRIWILRKILADMEPIDAMQFLLE
KMRGTRDNEEFLVTMNT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctgcactgcaagaaaagaaactcgccgaactccgtgagatcgcgcgtgag
atggatctgtccggctattcggggatgcgcaaacaggatctgatctatctgatcctcgaa
gcgcaggccgaagctgccgccggcaatgccccctcccgcccccgccgggccccggctccg
cgcaagcgcgaggcaacggcccgggcgacacggtcccagaaaaacggcacgtcggccgac
gcctcccaggaggccacccccgaggctgcccccgaagccgcctcaccggatcgccccgcc
cgctcgcgcccgcaggccacgcccggccatgccggcgcctcgtcccgggaagccgatacg
accacgcgggacgaagccgtcccgacggcggaacaaccgcaggcccgtgccgcccggcag
gcccgcagcgaaggccgctcccgccgcagccagcgcgacgagcgcacgcgcggggacgac
cgccgcaagcgcaacgaaggccgctcctccagcggggaatccgacgacgagcgcacccgc
gccgaggccggccgcgatgccccgaacgaccgccgcaccagcgcctcggacgaccgcgga
gacgacaacgaccgtggcaaccgggacgaccgccgcagccgccgcagtcggggccgcgga
cggggccgaaaccgcggcgaacgcaacgacagcagccgcagtgaacgcggcgacggcaac
cgcggcgacagcagccgcagcgaacggggcgacggcaaccgcggcgaacgcggcgacggc
aaccgcggcgaacgcggcgacggcaaccgcggcgaacgcggcgaccgtagcgacggcaat
cgcgacgatcggcggcaacgcatctacgagggtcgcccggcctacatggctcagtacgac
cccaacaagaccgagctggagggcatgatccgcaaggtcggcgtgctcgagatcctcccg
gacggctacggcttcctccgctcgcccgagtacaactatctgcccagcccggacgacatc
tacgtatccccgtcccagatcaagcgcttcagcctcaagctgggcgacacggtggacggc
gaggtgcggccgcccaaggaaggcgagcgcttcttcgccctgatccaggtcaacaccatc
aacggccggcggccgagcgagctggaagagcgccccagcttcgactacctcacgccgctc
tacccggagaagcacctgcgcctggaaacgaagccgagcgagttcagcacccgcatcctc
gacctgttcagccccatcggcaaaggccagcgcgggctgatcgtggcccagcccaagacg
ggcaagacgatcctcctgcagaagatcgccaacgccatcgcggagaaccacccggaatgc
tacctcatcatcctgctggtcgatgaacggccggaggaggtgacggacatgatccgcaac
gtccaggccgccgaggtgatcgcctccaccttcgaccaggagcccgaacggcacgtggag
gtggccaacatcgtgctggagaaagccaaacggctcgtcgaagccgggcaggacgtggtg
atcctgctggactcgatcacccgcctggcgcgtgcgcacaacgcggtcgcccccagccag
ggccgcacgatgagcggcggcatcgaggccggcgccctgcgcgggccgaaacgcttcttc
ggcgcggcccgcaacgtcgaggaaggcggctcgctgaccatcatcggcaccgcgctgatc
gacaccggcagccgcatggacgaggtgatcttcgaggagttcaaaggcaccggcaacatg
gaactggtgctgaaccgctccctggccgaccgccgcgtcttcccggccatcgacgtcgtc
aagtccggcacgcgccgcgaggagctgctgctgccggacgtgatgctcagccgcatctgg
atcctccgcaagatcctggcggacatggagcctatcgatgccatgcagttcctcctggag
aagatgcgcggcacccgcgacaacgaggagttcctcgtcaccatgaacacgtga
DBGET
integrated database retrieval system
