Rhinopithecus bieti (black snub-nosed monkey): 108512892
Help
Entry
108512892 CDS
T04641
Symbol
YTHDC2
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rbb03041
]
108512892 (YTHDC2)
Enzymes [BR:
rbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108512892 (YTHDC2)
Spliceosome [BR:
rbb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108512892 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_7
AAA_16
AAA_23
AAA_29
UvrD-helicase
ABC_tran
T2SSE
SRP54
Motif
Other DBs
NCBI-GeneID:
108512892
NCBI-ProteinID:
XP_017703933
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGD
QREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLT
HNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVK
RGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIP
CRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL
MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF
GSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKRKTAREEKQQTTLTEWYSAQEN
TFKPESQRQRTVPNVTDEYDLLDDGGDAVFSQLIKAEYKDKIPCYVNCLEPWLIKEMDAC
LSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGAN
VHSKASNGWMALDWAKHFGQTEIVDLLESYRXNLRFGNLDESSLVQTNGSDLSAEDRELL
KAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADS
THRYQVFMLHSNMQTSDQKKVLKNPPAGVRKYNILLQILSTNIAETSITVNDVVFVIDSG
KVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPE
LLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTE
LGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRK
RFTAGAFSDHMALLRAFQAWQKXRSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRAS
GFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPAS
VLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPA
RLASNALQEPSSFRVDGIPNDSSDSEMEDKTTANLAALKLDEWLNFKLEPEAASLLLQLR
QKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEEL
PLASSWRSNNSRKSSADTEFSDECTTAERILMKSPSPALYPPQKYKDRGILHPKRGTEDQ
SDQSSVKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEISQQK
GIWSTTPSNERKLNRAFWESGMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGG
VFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKN
TTD
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccgcggcaaccggctcctggcggtggcggaggcggt
ggcccctcgccgtgtggccccgggggcggcgggcgggccaaggggctgaaggacattcgc
attgatgaggaggtgaagatcgcagtcaatatcgcgctggagcgcttccgatacggggac
cagagagagatggaatttccttcttctttgaccagtactgaaagagcctttattcatcga
ctcagtcagtctcttggtttggtctctaaaagtaaaggaaagggagcaaatagataccta
actgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgact
cataatacaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagag
cgtacagaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaac
cgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaa
agaggagaatccgaatttgattcttttaggcagtctttaccagtgtttgagaaacaggaa
gaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtct
ggaaagaccacacagattcctcagttccttttagatgattgctttaaaaatggtatcccc
tgccgtatattttgtactcaaccaagacgattggcagctattgctgtggctgaaagagtt
gccgcagagagaagggaaaggattggtcaaacaattggttatcagatccgattagaaagc
agggtttctccaaagacacttctgacattttgtactaatggggtattgcttcgtacattg
atggcaggagatagtacgttgtcgactgtgacacatgttatcgtggatgaagtgcatgaa
agggatcgatttagtgattttttacttacaaagttaagagatttgttgcaaaagcaccca
actttgaaactaattctttctagtgctgccttggatgtgaatctctttataagatatttt
ggaagttgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttctg
gaagatattttaagaacaactggatatacaaacaaagaaatgttaaaatacaaaaggaaa
acagcaagagaagagaaacaacaaaccacacttacagaatggtactcagctcaagaaaat
actttcaagcctgaatctcagaggcagagaactgttccaaatgtgactgacgagtatgac
ttattggatgatggtggtgatgctgtcttcagtcagctgataaaagctgagtataaggac
aagataccgtgttatgtgaattgccttgaaccatggttaataaaggaaatggatgcttgt
ctttctgatatatggctacataaagatattgatgcctttgctcaggtctttcatctcatt
ttaactgaaaatgttagtgttgattacagacatagtgaaaccagtgcaacagctctgatg
gttgccgcaggacgtggctttgcaagtcaagtagaacagttaattagtatgggagccaat
gtccatagtaaagcatcaaatggctggatggcattggattgggctaaacactttgggcag
actgaaattgtggatcttctggaatcttacaggtaaaacttgagatttggaaatctggat
gaaagttctctggttcaaacaaatggaagtgacctcagtgctgaagacagagagctcctg
aaagcttatcatcatagtttcgatgatgaaaaagtagacttggatttgattatgcatctt
ctatacaatatctgccatagttgtgatgctggtgcagtactaatttttctgcctggatat
gatgaaattgttggactgagagatcgcatcctgtttgatgacaagcggtttgctgacagt
acacatagatatcaagtttttatgcttcattcaaacatgcaaacatctgatcaaaagaaa
gtattaaaaaacccacctgcaggtgttcgaaaatataatatcttgttgcagatcctttcc
accaatattgctgaaaccagcatcacagtcaatgatgttgtctttgttattgattctggt
aaggtgaaagagaaatcctttgatgctctgaattttgttacaatgttaaaaatggtatgg
atttccaaagctagtgccatacagcggaaaggcagggcagggcgatgtagacctggaatt
tgttttcgtctgttcagtagactccgattccagaatatgttggaatttcagactccagaa
cttttgagaatgccattacaggaactttgcttacataccaagctgttagccccagttaat
tgtcccattgctgattttcttatgaaagctcctgaacctccaccagctttaattgtaagg
aatgctgtacaaatgcttaagacaatagatgcaatggatacatgggaagatctgactgaa
cttgggtatcatttggctgacttgccagtagaaccacatcttggtaaaatggtcctgtgt
gctgttgttttaaagtgtctggaccccatccttacaattgcttgcacactagcttatcga
gatccttttgtgctacctactcaggcctctcaaaaacgtgcagctatgctttgtaggaaa
cgttttactgcaggagctttcagtgaccatatggcacttctcagagcattccaggcctgg
caaaagncacgaagtgatgggtgggagcgagccttttgtgaaaagaattttctttcacag
gctactatggaaataatcataggcatgagaacgcagttgcttggtcaacttagagcatca
ggttttgttagagcacgaggtggtggtgacattcgagatgttaacacaaactctgagaat
tgggctgtcgttaaagctgcattggtggcaggcatgtatcctaatttagtccatgtggac
agagagaatctagtgttgacagggccaaaggagaaaaaagtacgatttcatcctgcttca
gttctcagtcagcctcaatataaaaagattcctccagccaatggccaagctgcagcaatt
aaggcactgcccacagattggcttatttatgatgaaatgaccagagcccatagaatagct
aatattagatgttgttcagcagtgacacctgtcactatattggtattctgtggaccagct
agattggcaagtaatgctcttcaggaaccttcgtcctttagagtggatggcattcccaat
gacagtagtgatagtgaaatggaggacaaaactacagctaatttggcagccttgaaactt
gatgagtggctcaatttcaaactagagccagaggcagctagtttattgctgcagctcaga
cagaagtggcatagcttatttttacgccgaatgagagctccatctaaaccttggtctcaa
gttgatgaagctaccataagagcaattatagctgttttaagcactgaagaacagtctgca
ggtttacaacaaccatctgggattggtcaaaggccaaggcctatgtcttcagaagagctt
cctttggcctcttcttggaggtcaaataatagtaggaaaagttcagcagatactgaattt
tctgatgagtgtactactgcagaaagaatactgatgaaatctccatctccagcattatac
ccacctcagaagtacaaagatagaggaattttacatcctaaacgaggcaccgaggaccaa
tcagatcagtcttctgtgaaatctacagacagcagtagttacccaagtccttgtgctagt
ccttctcctccatcctcaggaaagggatcaaaatctccttcaccaagaccaaacatgcct
gttcgatacttcataatgaagagtagcaatttgagaaaccttgaaatttctcaacagaag
ggtatctggtctacaactcctagtaatgaacggaagctaaatcgagccttttgggaaagc
ggcatggtttacttggtattttctgttcaaggatctggacatttccagggattttctagg
atgtcttctgagattggaagggaaaagagtcaagactggggctctgcgggactaggagga
gtatttaaagtggagtggatacgaaaagaaagccttccctttcaatttgcacaccattta
ctcaatccatggaatgacaacaagaaagtgcagataagcagggatgggcaggaactagaa
cctcaggttggtgaacagttgctccagttatgggaacgtcttcccttgggagaaaaaaac
acaactgattga
DBGET
integrated database retrieval system
