Rhinopithecus bieti (black snub-nosed monkey): 108513771
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Entry
108513771 CDS
T04641
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rbb04040
]
108513771 (SCN11A)
Ion channels [BR:
rbb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108513771 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
108513771
NCBI-ProteinID:
XP_017705108
UniProt:
A0A2K6JS34
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKDKSKDQTGEVPHPRPQLDLKASR
KLPNLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKHALFIFGPFNSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGRAKNSNSNNTDIAECVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGIAIVSYIPGINIKVLSLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCISRHCKNISNLEAHDHC
FEKKENSTEFKMCGIWMSNSTCSTQYECNHTKINPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRTAGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSNFTPQKRKLFGIKKRKSFFLRESGKGQPP
GSDSDEDSQKKPQLLEQTKRLSQNLSLDHFDEHRDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLVWNCCPPWLYIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEPSFEKMLNTGNLVFTSIFMAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVMNYK
FQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGM
QLFGHSFHSQKSQKLCNPTGTTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEA
NTSSSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRFR
RAFCFVRHTLEHFCHKWCRKQKLPKQKEVTGGCTAQSKDIIPLVTEMKRGSETQEELGIL
TSVPKTLGIRHDWTWLAPLAEEEDDAEFSGEDNAQPITQPEAEQQAYELHQENKKPTSQG
VQSVEIDMFPEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGLLPEMVPKKQPERCLP
KGFGCCFSCCSMDKRKPHWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHL
QSQPKIQDLLNCTDVIFTHIFILEMVLKWVAFGFGKYFTSAWCCLDFIIVIVSVTTLINL
KELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFF
SGKFGKCINGTDSVINYTIIANKSQCERGNFSWINQKVNFDNVGNAYLALLQVATFKGWM
DIIYAAVDSREKEQQPEFESNSLGYIYFVVFIVFGSFFTLNLFIGVIIDNFNQQQKKLGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGFVFDIVTSQIFDIIIISLIILNM
ISMMAESYDQSKAVKSTLDHLNWVFVVIFTLECLIKIFALRQYYFTNGWNLFDSVVVLIS
IVSTMISTLESQEYIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNI
GLLLFLIMFIYAILGMNWFSKVNPESGIDDIFNFKTFAGSMLCLFQISTSAGWDSLLNPM
LRSKESCNSSSENCHLPGIATSYFVSYVIISFLIVVNMYIAVILENFNTATEESEDPLGE
DDFDIFYEVWEKFDPEATQFIEYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRL
HCMDVLFAFTARVLGGSDGLDSMKAMMEEKFMETNPLKKLYEPIVTTTKRKEEERCAAVI
QKAFRKYMMKVTKGDQGDQSDLENRPHSPLQTLCNGDLSSFGVVKGKVHYD
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatctttccagatgagcggaattttcgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaagataagtct
aaagaccagacaggagaagtaccccatcctcggcctcagcttgacctaaaggcctccagg
aagttgcccaatctctatggcgacattcctcgtgagctcataggaaagcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttaaacaaaaagaggacaatc
taccgcttcagtgccaagcatgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagagtctcagtccattcattgttcagcatgttcataatcggcactgttatc
atcaactgcgtgttcatggctacagggcgtgctaaaaacagcaacagcaacaatactgac
attgcagagtgtgtcttcactgggatttatatttttgaagctttgattaaaatactggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcatcggaatagcgattgtgtcatatattccaggaatcaacatcaaagtgttgtcc
ctgcgtaccttccgtgtgttcagagctttaaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccttgctgcgctctgtgaagaagctggtcaatgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagcctgaac
ctgaaatgcatctcgaggcactgtaaaaatatcagtaacctggaagctcatgaccattgc
tttgaaaagaaagaaaattcgactgaattcaaaatgtgtggcatctggatgagtaacagt
acctgttccacacaatatgaatgtaaccacaccaaaattaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcc
tgggagaagctttatcaacagaccctgcgtactgctggactctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaaccctggctgttgttacc
atggcgtatgaggagcagaacaagaatgtagctgcggagatagaggccaaggaaaagatg
tttcaggaagcccagcagctgttaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttccctcgaaacatcaaattttaccccccaaaagagaaagctc
tttggtattaagaaaaggaagtccttctttttgagagagtctgggaaaggccagcctcca
gggtcagattctgatgaagattcccaaaaaaagccacagctcctagagcaaaccaaacga
ctgtcccagaatctatcactggaccactttgatgagcatagagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgcggggaaaacctggcatccaaatacctcgtgtggaactgctgc
cccccgtggctgtacattaagaaggtcctgagaactgtgatgactgacccgtttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcataag
atggagcccagttttgagaagatgttgaatacagggaatttggttttcactagcattttt
atggcagaaatgtgcctaaaaatcattgctctcgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtaatgaactataaa
tttcaaaagagaagctggccattcttgcgttccttcagagtgctcagggtcttcaagtta
gccaaatcctggccaactttgaacacactaattaagataatcggcaactctgtcggagcc
cttggaagcctgactgtggtcctggtcattgtgatctttattttctcagtagttggcatg
cagctttttggccatagcttccattctcaaaagagtcaaaaactctgtaacccgacaggc
acgacagtctcatgtttacggcactggcacatgggggatttctggcactccttcctagtg
gtgttccgcatcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaagaagcg
aatacatcatcatcattgtgtgttattgtcttcatattgatcacggtgataggaaaactt
gtggtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaagaaat
ggaaacttagaaggagaggccaggaaaactaaagtccagttagcactggatcgattccgc
cgggctttttgttttgtgagacacactcttgagcatttctgtcacaagtggtgcaggaag
caaaagttaccaaagcaaaaagaggtgacaggaggctgtactgcacaaagcaaagatatc
attcccctggtcacggagatgaaaaggggctcagagacccaggaggagcttggtatacta
acctctgtaccaaagaccttgggcatcaggcatgactggacttggttggcaccacttgca
gaggaggaagatgatgctgaattttctggtgaagataacgcacagcccatcacacaacca
gaggcagaacaacaggcctatgagctccatcaggagaacaagaagcccaccagccaggga
gttcaaagtgtggaaattgacatgttccctgaagatgagcctcatctgaccatacaggat
ccccgaaagaagtctgatgttaccagtatactatcagaatgtagcaccattgatcttcag
gatggctttggattgttacctgagatggttcccaaaaagcaaccagagagatgtttgccc
aaaggctttggttgctgcttttcatgctgtagcatggacaagagaaagcctcactgggtc
atttggtggaacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgagagc
tttattatctttgtgattctgctgagcagtggggcactgatatttgaagatgttcacctt
cagagccaacccaaaatccaagatttactaaattgtactgacgttatttttacacatatt
tttatcctggagatggtactaaaatgggtagcctttggatttggaaagtatttcaccagt
gcctggtgctgccttgatttcatcattgtgattgtctctgtgaccaccctcattaactta
aaggaattgaagtccttccgaactctgcgagcactgaggcctcttcgtgcgctgtcccag
tttgaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctgaat
gttttgcttgtctgcctcattttctggctcatattttgtattctgggagtacacttcttt
tctggaaaatttgggaaatgcattaatggaacagactcagttataaattataccatcatt
gcaaataaaagtcaatgtgaaaggggcaatttctcttggatcaaccagaaagtcaacttt
gacaatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctggatg
gatattatatatgcagctgttgattccagagagaaagaacagcagccagagtttgagagc
aattcactcggttacatttacttcgtagtttttatcgtctttggctcattcttcactctg
aatctcttcattggtgttattattgacaacttcaaccaacagcagaagaagttaggtggc
caagacatttttatgacggaagaacagaagaaatactataatgcaatgaaaaaattagga
tccaaaaaacctcaaaaacctattccacggcctctgaacaaatgtcaaggttttgtgttc
gacatagtcacaagccagatctttgacatcatcatcataagtctcattatcctaaacatg
attagcatgatggctgaatcatacgaccaatccaaagccgtgaaatccacccttgaccat
ctcaactgggtctttgtggtcatctttacattagaatgtcttatcaaaatcttcgctttg
aggcaatactacttcaccaatggctggaatttatttgactctgtggtcgtgcttatttct
attgttagtacaatgatttctaccttggaaagtcaggagtacattcctttccctccgacg
ctcttcagaattgtccgcttggctcggattggccgaatcctgaggcttgtccgggctgca
cgaggaatcaggactctcctctttgctctgatgatgtcgctcccttctctgttcaacatt
ggtcttctactctttctgattatgtttatctatgctattttgggtatgaactggttttcc
aaagtgaatccagagtctggaattgatgatatattcaacttcaagacttttgccggaagc
atgctctgtctcttccagataagcacatcagcaggttgggattccctgctcaaccccatg
ctgcgatcaaaagaatcatgtaactcctcctcagaaaactgccacctccctggcatagcc
acatcctactttgtcagttacgttatcatctcctttctcattgttgtcaacatgtacatt
gctgtgattttagagaacttcaatacagccactgaagaaagcgaggaccctttgggtgaa
gatgactttgacatattttatgaagtgtgggaaaagtttgacccagaagcaacacaattt
atcgaatattctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtggca
aagccaaataaatatcaatttctagtaatggacttgcccatggtgagtggtgatcgcctc
cactgcatggatgttcttttcgccttcaccgctagggtacttggtgggtctgatggcctg
gatagcatgaaagcaatgatggaagagaagttcatggaaaccaatcctctcaagaagttg
tatgaacccatagtcaccaccaccaagagaaaggaagaggaaagatgtgctgcggttatt
caaaaggcctttcgaaagtacatgatgaaggtgaccaagggtgaccaaggtgaccaaagt
gacttggaaaacaggcctcattcaccactccagactctttgcaatggagacttatctagc
tttggggtggtcaagggcaaggtccactatgactaa
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integrated database retrieval system
