Rhinopithecus bieti (black snub-nosed monkey): 108513948
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Entry
108513948 CDS
T04641
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108513948 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbb03021
]
108513948 (SETX)
Enzymes [BR:
rbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108513948 (SETX)
5.6.2.5 RNA 5'-3' helicase
108513948 (SETX)
Transcription machinery [BR:
rbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108513948 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
AAA_22
ResIII
NAT10_TcmA_helicase
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
108513948
NCBI-ProteinID:
XP_017705411
LinkDB
All DBs
Position
Unknown
AA seq
2478 aa
AA seq
DB search
MLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRLGS
KVWGQLIDPIEAFQTIINNASYNREIQHIRNSSVRTKLEPESYLDDMVTCSQIVYNYNPE
KTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMDLK
DLGVAYIVEVVHHLYSEVKDVLNQTDAMCDKVTEFFLLILVSVIELHRNKKCLHLLWVSS
QQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLSLHSMPSNSVQLACVQLIRSL
LKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKAPPC
NTFVDLTSTCKTSPASYNREESEQIGKKSRKDMHYLEASSPTFSKEPMKAQDSVLIKADN
TIEGDNDEQNYIKDVKLEDQLSAGSCLKRNSENMFTERAEDEIKIGTRKQKSVKENSSYT
PEDCTSRNGPERGCDRGIIVSTRLLTNSSTDALEKVSTSNEDFSLKDDALAKTSKRKTKV
QKDEICAKLSHVIKKQHRKSTLVNNTINLDENLTVSNIGSFYSRKDTGVQKGDGFIHNLS
LDPSGVLDYNKNGEQKSQNNLLPEEKQLKNEELDIFYSHENNCEIQEFHADDKDSIPFTE
MANTSEKKSSSFKDLMTVPESRDEAMSNSTNVIYSNLTREQAPGISPKSDTLTDSQIDRD
LHKLSLLAQASVITFPSDSPQNSSQLQRKGKEDKRCFTANQNNGDASRGQVIIISDSDDD
DDDERILSLEKLTRQDKRCLEKERPEQHVSTVTEEKNPVKEEKTKSLFQFEESDSQCFEF
ESASEVFSVWQDHLDNNNSVQDGEKKCLTPITNTTNGQDCTDYVSEVVKKGAEGIEEHTR
PQSSSISVEEFCEIEVKKPKRKRSEKPIPEDPVRPSSSVRNEGQSDTNKRNLVGNDFKSI
GRRTTTSNSSIQRATTVSQKKSSKLCTYIEPIRKVPVSKTPKKTHSDAKKGQNRSSNYLS
CRTTPAIVPPKKFRQCPEPTSTVEKLGLKKGPRKAFELSQRSLDYVAQLRDHGKTVGVVD
TRKKTKLISPQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRQRLSDCESTDATRAGPHTA
QNSDTFVPESDRSDYDCSAGTEVLANSNGKQLIKCVPSEPETIKAKHGSPATDGACPLNQ
CDSIVLNGTVPTSEVIVSISEDPLGGGDPTAHHTEMATLNEGEPDSSSDTEEDNLFLTQN
DPEDMDLCSQMENDNYKFIELIHGKDTVQVEEDSVSHPQLESLSGTKCKYKDCLETTKNQ
GEYCPQHSEVKATDEDVFRKPGLPPSASKPLRPTTKIFSSKSTSRIAGLSKSLETSSALS
PSLKNKAKGIQSILKVPQPAPLVAQKPVGEMKNSSNVLHPQSPNNSNRQGCKVPFGESKY
FPSSSPVNILLSSQSVSDTFIKEVLKWKYEMFLNFDQCGPPASLCQSISRPVPIRFHTYG
DYFNVFFPLVVLNTFETVVQEWLNSPNRENFYQLQVRKFPADYIKYWEFAVYLEECELAK
QLYPKENDLVFLVPERINEEKKDAERNDIQDLHEYHSGYVHKFRRTSVMRNGKAECYLSI
QTQENFPANLNELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTKDLLT
TTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYCLL
TENQRKGRSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDI
NLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQAMHKRKEFLDYQLDELSRQRALC
RGGREIQRQELDEKISKVSKERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGL
LLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQ
EYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNR
QTETIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFRN
IGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSVQGSIGN
SSVPGTLYWDREFLASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSP
EPKYLHWALKENQHWNQLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPVLQRSLTHPPTI
APEVSRPQGGLPSSKLDSGFAKTSFAASLYHTPSDSKETTLTVTSKDPERPVHDQLRDPR
LLKRMGIEVKGGIFLWDPQPLSPQHPGATPPAGEPSFPVVHQDLGHVQQPAAVVAALSSH
KPPVQGEPPAASPEASTCQSKCDDPEEELCHRREARAFSEGEQEKCGSETPHTRRNSRWD
KRGLEQEDSSSSKKRKLL
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgaccattcttgaggaacaagccatggattccctattgttgggctcagacaaa
caaaatgattttatgcaatcgatacttcacactatggagaggcaatcagacgatgatagt
gtggatcctttctggccagcattacactgttttatggtgattctggaccgccttggatct
aaggtctggggtcagcttattgatcctattgaggcatttcaaaccataatcaacaatgca
agctacaatagagagattcaacatatacggaacagctctgtaaggaccaagttagaaccg
gagtcatatttggatgatatggtgacttgcagccagatcgtatacaattataatcctgaa
aagaccaagaaggattctggatggagaacagccatttgcccagattattgtcctaacatg
tatgaagaaatggaaacattagccagtgtgcttcagtcagatattggtcaagacatgcgt
gttcataacagcacatttctgtggttcatcccttttgtccagtccctcatggatcttaag
gatttgggtgtggcttacatagtagaggttgttcatcatctgtactctgaagtcaaagat
gtcctcaaccaaacagatgccatgtgtgacaaagtcactgaattttttcttctaattttg
gtatcagtgattgaactgcatagaaataaaaaatgtttgcatttgctgtgggtaagttcc
cagcaatgggtagaagctgtcgtcaaatgtgccaagcttcctactactgcatttacacgg
agttctgagaaatcatctggaaattgctccaaaggaacagcaatgatatcatcactgtcg
ttgcattccatgccatctaactctgtacaacttgcttgtgtgcagctgattagaagtctc
cttaaagaaggttatcagcttgggcagcaatctctttgcaagcgattctgggataagctc
aacttattccttagaggaaatttatctctaggttggcagttgactagtcaggaaacccac
gagctacaaacttgtttaaagcaaattattagaaacataaaattcaaagcacctccatgt
aacacttttgtggatctgacttctacatgtaaaacctctccagcatcttataatagagaa
gaaagtgaacaaatagggaagaagtctagaaaagatatgcattatttggaagcttccagc
ccaacattttctaaagaaccaatgaaagcgcaagacagtgtattgatcaaagcagataac
actatagaaggtgacaatgatgagcaaaattatataaaggatgtgaaactagaagaccag
ctctcagctgggtcatgcttgaagcggaatagtgaaaacatgtttactgaaagagctgaa
gatgaaattaaaataggtacaaggaagcagaagtctgtaaaagagaactcctcatataca
ccagaggattgtacttcaagaaatggtccagaaaggggatgtgacagaggaataatagta
tcaacacgtttgttgactaattctagcactgatgctttggaaaaagtgtccacatcaaat
gaagatttctctttaaaggatgatgctcttgctaaaacctcaaaacgaaaaactaaggta
cagaaagatgaaatctgtgcaaagttatcacatgtaataaagaaacaacacaggaagagt
actttggtcaataatactatcaatttagacgaaaatttgactgtatctaacattgggagt
ttctattcaaggaaagatacaggagttcagaaaggagatggtttcatacataatctttct
ttagaccctagtggtgttctggattataataagaatggagaacaaaaatctcaaaacaat
ttattgccagaagagaagcagttaaagaatgaagagttagatattttctattcccatgaa
aacaattgtgaaatacaggaatttcatgctgatgataaagattcgatcccctttacagaa
atggccaatacttcagagaagaaatcatcttcctttaaagatcttatgactgtacctgaa
tcaagagatgaggcgatgagtaatagtaccaatgtgatttattctaacttgacaagagaa
caggcccctggcatcagtcctaaatctgacaccttaacggattctcagatagacagagac
cttcacaaattatctttactagctcaagccagtgttattacgtttccatctgattcccct
cagaactcatcccagctacaaaggaaaggaaaagaagataaaagatgtttcacagctaac
caaaataatggagatgcctcccgtggacaggtgattattatttcagattctgacgatgat
gatgatgatgaaagaatcctgagtcttgagaaactcactagacaggacaaaagatgcctt
gagaaggaacgtccagagcagcacgtttcaacagttacggaggaaaagaatccagtaaag
gaagaaaagacgaagtctctttttcagtttgaggaatctgattctcagtgttttgagttt
gaaagtgcatctgaagtgttttccgtttggcaggatcatctagacaataataattcagtt
caagatggtgagaaaaaatgtttgactcctataaccaataccacaaatggtcaggattgt
acagattatgtatctgaagttgttaaaaaaggggcagagggcattgaagaacacactaga
ccacagagcagtagtatttctgttgaggaattttgtgaaattgaagtaaaaaagcctaag
agaaaacgatctgaaaaaccaattcctgaagatcctgtgaggccttcatcttctgtcaga
aatgagggccagtctgatactaataagagaaatcttgttggaaatgattttaagagtata
ggtagaaggactacaacttccaattcaagtattcagagagccactacggtttcacaaaag
aaatcttcaaagctttgtacttatatagaacccatcaggaaagttccagtttctaagacc
cctaagaaaactcattcagatgccaaaaaaggacagaatagaagttcaaattacctcagt
tgtaggacaactcctgctatagtgccaccaaagaaatttcgtcagtgtcctgaaccaact
tcaacagttgagaaacttggcctgaaaaagggtcctcgtaaggcatttgagttgtcccag
cgatctttggattatgtagctcagttacgtgatcatggcaaaactgttggagtagttgat
actcgaaaaaagactaaattaatttctcctcagaacctgtctgtcagaaataataagaaa
ctgctgactagtcaagaacttcagatgcaaaggcaaatcagacccaaatcacaaaaaaat
agacaaagactttctgattgtgaaagtacagatgctacaagagcagggcctcatacagca
cagaattctgacacatttgtaccggaatctgataggtcagattatgattgttcagcagga
actgaggtacttgccaacagtaatggaaaacagttaataaaatgcgtgccttctgaacca
gaaaccataaaagcaaaacatgggtctccagcgactgatggtgcttgccctttgaaccaa
tgtgattcaatagtgttaaatggaacagtaccaacaagtgaagtaattgtctctatttca
gaggaccctctggggggaggtgatccgacagcacatcatacagagatggcaactttgaac
gagggagagcctgactccagcagtgatacagaggaagataacttatttttaacacaaaat
gatcctgaagatatggatttatgttcacaaatggagaatgacaattataaattcattgaa
ctaattcatggaaaagatacagttcaggttgaagaagattctgtaagtcatcctcagttg
gaatctttgagtggcacaaagtgtaagtacaaagattgtcttgaaaccacaaaaaaccag
ggtgaatactgcccacaacactctgaagtgaaagcaacagatgaagatgtatttcgtaaa
cctggtttgcctccttctgcatctaaacctttgagacctaccactaagatttttagctca
aagagtacttcacgaattgctggtctttctaaatctttggaaacttcttcagcactttca
ccatctctaaaaaataaggcaaaggggattcagtcgattttgaaagtaccacagccagct
cccctcgtagctcagaagccagtgggtgaaatgaaaaattcgagcaatgttcttcatcct
cagtctccaaataattccaacaggcaaggttgcaaagttccatttggtgaaagcaaatat
tttccatcttcctctccagtaaacattctcttgtcatcacagtctgtctctgacaccttc
attaaagaggtcttaaaatggaaatatgaaatgtttttgaactttgatcagtgtgggccc
cctgcaagtctttgtcagtccatctcaagacctgtgcctatcagatttcacacttatgga
gattattttaatgtttttttccctttggtggtattgaatacttttgaaacagtggtgcag
gaatggctcaactctccaaatagagagaatttctatcagttgcaagtacgaaaatttcct
gctgattatataaaatactgggagtttgcggtttatctggaagaatgtgaattggctaaa
cagctttatccaaaggaaaatgatttggtgtttttagttcctgagagaataaatgaagag
aagaaagatgcagagagaaatgacatacaagatctccacgaatatcattctggttatgtt
cataaatttcgccgcacttcagtcatgcgtaatgggaaagctgagtgttacctttccatc
cagactcaagagaattttccggccaatttaaatgaacttgtgaattgtattgtaatcagt
tctctggtaacaacacaaaggaagttgaaagccatgtctcttttgggtagtcggaaccaa
ctggctagagctgttctgaatccaaaccctatggacttctgtacaaaagatttactaact
acaacatctgagagaattattgcttacttaagagatttcaatgaagaccaaaagaaagca
atagaaactgcatatgctatggtgaaacactcaccatcagttgccaaaatctgcttgatt
catggaccacctggaacaggaaaatcaaaaactattgttggcctcctctattgtctactg
acagagaaccagaggaaggggcgttcagacgaaaactccaatgccaaaatcaaacaaaac
cgtgtcctcgtgtgtgcaccttccaatgcagctgttgatgaacttatgaaaaaaattatc
cttgaattcaaagaaaaatgtaaagacaagaagaatcctttaggaaactgtggagatata
aatttagtacgactgggtccagaaaagtctatcaataatgaggttctaaagttcagtttg
gacagccaagtaaaccacagaatgaaaaaagatttaccttctcatgttcaggcgatgcat
aaaagaaaggaatttctagattatcagttggatgagctttcccggcagcgagctctatgc
cgaggtggacgggaaatacagaggcaagaattagatgaaaaaatttccaaagtttctaag
gaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgcccacagaaaacacag
agtatcatcatcttagagtcccatgtcatctgctgcacattgagcacaagtggtggctta
ctacttgaatctgctttccgggggcaagggggtgtccccttcagctgtgtcattgttgat
gaggctggacagtcttgtgaaattgagactcttaccccactcatccatcgttgcaataag
ctcatcctagtaggagatcccaagcagctccctcccacagtcatctctatgaaagcacag
gagtatggctacgaccagtcaatgatggctcgcttctgcagactgctggaagagaatgta
gaacacaacatgatcagcaggctgcctattctgcagctcactgtgcagtacaggatgcat
ccagacatatgcctcttcccttctaattatatttacaacagaaacttaaaaacaaataga
cagacagaaaccattcgatgttcatcggactggccatttcaaccataccttgtgtttgat
gtcggagatggttcagaaagacgggataatgactcatacataaatgttcaagaaataaaa
ctggtgatggaaataattaagcttattaaagacaaaagaaaggatgttagttttcgaaac
attggcataataactcattacaaggcccagaagacgatgattcagaaggatttggacaaa
gagttcgatagaaaaggaccagcagaagtagatactgtggatgcgttccagggtcggcag
aaggattgtgttattgttacatgtgtcagagcaaatagcgtgcaaggttcaattgggaat
tcttctgtgcccggtaccctgtattgggacagagaattcctggcaagtttgcagagattg
aatgtcaccatcacacgagccaagtacagcctcttcatcctcggacatttgaggaccctg
atgcaacttcttcctaggagcttttgtgtacacgtgaaccattcgccttttttcagccca
gaacccaagtatctacactgggctctcaaggaaaaccagcattggaatcagctgattcag
gatgctcagaagcgtggtgccattattaagacctgtgacaaaaactacagacatgatgca
atgaagattctgaaactcaagcctgtgctacagagaagtctcactcaccctcctaccata
gccccagaggtatccagaccccagggtggcttgcccagcagcaagctagacagtggattt
gccaagacatcttttgctgcgtctctgtaccacacaccctctgactccaaggaaactact
cttactgttacttcaaaggaccctgaaagacctgttcatgaccaacttcgggacccacga
ctgctgaagaggatgggcattgaggtcaaaggaggaatattcctatgggatccacaaccc
ttgagcccccagcatcctggagcaacacctcctgcaggagagccgagcttccctgtcgtt
caccaggacctgggccatgtacagcagcctgctgctgtggtggctgctctgagcagccac
aaacctcccgtgcagggcgaacctccagctgccagtcctgaggcttccacgtgtcagagc
aaatgtgatgacccagaagaggagctctgtcacaggagagaggccagggctttcagtgaa
ggcgagcaggagaagtgtggttccgagacccctcacaccaggaggaactctaggtgggac
aagaggggactggagcaggaggacagcagcagttccaagaaaagaaagcttttatag
DBGET
integrated database retrieval system
