KEGG   Rhinopithecus bieti (black snub-nosed monkey): 108514504
Entry
108514504         CDS       T04641                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4A isoform X1
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
rbb  Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03250  Viral life cycle - HIV-1
rbb04144  Endocytosis
rbb04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:rbb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108514504
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108514504
  09143 Cell growth and death
   04217 Necroptosis
    108514504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rbb04131]
    108514504
   03400 DNA repair and recombination proteins [BR:rbb03400]
    108514504
Membrane trafficking [BR:rbb04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108514504
DNA repair and recombination proteins [BR:rbb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108514504
SSDB
Motif
Pfam: AAA Vps4_C MIT PH_17 AAA_lid_3 PH TIP49 AAA_14 AAA_16 AAA_22 AAA_5 AAA_25 RuvB_N IstB_IS21 AAA_18 DUF815 AAA_17 AAA_2 AAA_33 RNA_helicase nSTAND3 AAA_24 PhoH ResIII Mg_chelatase AAA_7 Parvo_NS1 TPR_12 AAA_28 NACHT bpMoxR YhdB TPR_2
Other DBs
NCBI-GeneID: 108514504
NCBI-ProteinID: XP_017706255
LinkDB
Position
Unknown
AA seq 691 aa
MCFAARNLSMPDLENRLIELHSPDSRNTLILRCKDTATAPSWLVAIHTNIMALLPQVLAE
LNAMLGATSTAGGSKEVKHIAWLAEQAKLDGGRQQWRPVLMAVTEKDLLLYDCMPWTRDA
WASPCHSYPLVATRLVHSGSGCRSPSLGSDLTFATRTGSRQGIEMHLFRVETHRDLSSWT
RILVQGCHAAAELIKEVSLGCMLNGQEVRLTIHYENGFTISRENGGSSSILYRYPFERLK
MSADDGIRNLYLDFGGPEGELKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYE
AHSDKAKESIRAKCVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEK
KKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLF
GPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFI
DEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFE
KRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPV
RKVQSATHFKKVCGPSRTNPSVMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSD
MLRSLATTRPTVNADDLLKVKKFSEDFGQES
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgtgctttgctgctagaaacctaagcatgccggatctggaaaacagattgatagagcta
cattctcctgatagcaggaatacgttgatcctacgctgcaaagatacagccacagcaccc
tcctggttggtagctatccacaccaacataatggctctcctcccacaggtgttggctgaa
ctcaacgccatgcttggggcaaccagtacagcaggaggcagtaaagaggtcaagcatatt
gcctggctggcagaacaggcaaaactagatggtggaagacagcaatggagacctgtcctc
atggctgtgactgagaaggatttgctgctctatgactgtatgccatggacaagagatgcc
tgggcatcaccatgccacagctacccacttgttgccacaaggttggttcattctggctct
ggatgtcgatccccctcccttggatctgaccttacatttgctaccaggacaggctctcga
cagggcattgagatgcatctcttcagggtggagacacatcgggatctgtcatcctggacc
aggatacttgttcagggttgccatgctgctgctgagctgatcaaggaagtctctctaggc
tgcatgttaaatggccaagaggtgaggcttactattcactatgaaaatgggttcaccatc
tccagggaaaatggaggctctagcagcatattataccgctacccctttgaaaggctgaag
atgtctgctgatgatggcatccgaaatctatacttggattttggtggtcccgaaggagaa
ctgaaagccattgatctggtgacgaaagccacagaagaggacaaagccaagaactacgag
gaggcgctgcggctgtaccagcatgcggtggagtacttcctccacgccatcaagtatgag
gcccacagcgacaaggccaaggagagcattcgagccaagtgcgtgcagtacctagaccgg
gccgagaagcttaaggattatttacgaagcaaagagaaacacggcaagaagccagtcaaa
gagaaccagagtgagggcaagggcagtgacagtgacagtgaaggggataatccagagaag
aagaaactgcaggaacagctgatgggtgctgttgtgatggagaagcccaacatacggtgg
aacgacgtggccgggctggagggggccaaggaggccctcaaagaagctgtcattttgcca
atcaaattcccacatttgttcacaggcaagcgcaccccctggcgggggattctgctgttc
ggaccccctggcacagggaaatcctacttggccaaagccgtggcaacagaggccaacaac
tccaccttcttctctgtgtcctcctcagacctgatgtccaagtggctgggggagagtgaa
aagctggtcaagaacctgtttgagctggccaggcagcacaagccctccatcatcttcatc
gacgaggtggattccctctgcggatcccgaaatgaaaatgagagcgaggccgcccggagg
atcaaaacggagttcttggtccagatgcagggggtggggaataacaatgatgggactctg
gttcttggagccacgaacataccatgggtgttggattcggccatcaggaggaggtttgaa
aagcgaatttacatccccttgccggaggaagctgcccgtgcccagatgttccggttgcat
ctggggagcactccccacaacctcacggatgcaaacatccacgagctggcccggaagacg
gaaggctactcgggtgcggacatcagcatcatcgtgcgggactccctcatgcagcctgtg
aggaaggtgcagtcggccacacacttcaaaaaggtctgtggtccctcccgcaccaacccc
agcgtgatgatcgatgacctcctaaccccatgctcaccaggggacccaggagccatggag
atgacttggatggatgtccctggggacaaactcttagagcctgtggtttgcatgtcggac
atgctgcggtctctggccaccacccggcccacggtgaatgcagacgacctcctgaaagtg
aagaaattctcagaggactttgggcaggagagttaa

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