Rhinopithecus bieti (black snub-nosed monkey): 108515124
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Entry
108515124 CDS
T04641
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbb03009
]
108515124 (PDCD11)
Ribosome biogenesis [BR:
rbb03009
]
Eukaryotic type
90S particles
Other 90S particles
108515124 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
Spt6_S1
HAT_PRP39_N
HAT_PRP39_C
OB_RRP5_4th
HAT_Syf1_CNRKL1_C
Suf
OB_RRP5
TPR_14
TPR_19
ARM_TT21
UTP6_C
TPR_16
DUF2110
DUF7017
ARM_TT21_5th
TPR_2
PPR
Motif
Other DBs
NCBI-GeneID:
108515124
NCBI-ProteinID:
XP_017707260
LinkDB
All DBs
Position
Unknown
AA seq
1872 aa
AA seq
DB search
MATLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKIE
KRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLN
CIVEKVKGNGGVVSLSVGHSEVSTAIATEEQSWTLNNLLPGLVVKAQVQKVTPFGLTLNF
LTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCVHPRTRVVRLSLRPMFLQPGRPLTRLS
CQNLGAVLDDVPVQGFFKKAGATFRLKDGILAYARLSHLSDSKNVFNPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGIVLTIKSYGMLVKVGEQMRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLVESKLPVITCYADAK
PGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVAVLNCE
PSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAVNIGQLVDVKVLEKTKDGLEVAVLPHNI
HAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGHVLLCRKPTLVSTVEGGQDP
KNFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVA
AKVTNVDEEKQRMLLSLRLSDCALGDLATTSLLLLSQCLEELQGVRSLMSNRDSVLIRTL
AEMTPGMFLDLVVQEVLEDGSVVFSGGPVPDLVLRASRYHRAGQEVESGQKKKVVILNVD
LLKLEVHVSLHQDLVNRKAKKLRKGSEHQAIVQHLEKSFAVASLVETGHLAAFSLTSHLN
DTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDEDEEVD
PALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGISPTT
KLKVGKTVTARVIGGRDMKTFKFLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPV
EKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVG
QALRATVVGPDSSKAFLCLSLIGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSI
FHVSDSYSETPLEDFVPQKVVRCYVLSTTDSILTLSLRSSRTNPETKSKVEDPEINSIQD
IKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKALYNKHLPEGKLLTAR
VLRLNHQKNQVELSFLPGDTGKPDLLSASLEGPLPKQEERKTEAEERDQKGEKKNQKKNE
KKNQKGQEEVELPSKEKQQPQKPQAQKRGGRERRESGSEQERVSKKPKKAGPSAEDDSLM
DVYYREGKEEAEETNVLPKEKQTKPAEVPRLQLSSGFAWNVGLDSLTPALPPLAESSDSE
EDEKPHQATQKKKSKKERELEKQKAEKELSRIEEALMNPGRQPESADDFDRLVLSSPNSS
ILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTK
VFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRS
QAGASRRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMTIKHGSQKAVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
EYVEAKSSVLED
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctggaagaaagcttcccccgaggaggtacaagaaagatccacaaaccagag
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaggga
tccaccaaaagaaaaaagagccagaaggggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtccgcaagagagaagtttgaaatccttagtgttgagtcccta
tgtgagggaatgcggattctgggttgtgtaaaagaggtgaatgaactggaactggtgatt
agtctccccaacggcctccaggggtttgtacaagtcactgaaatctgtgatgcctacacc
aaaaagctgaatgagcaggtgacacaagaacaacctctgaaggacctacttcacttgcct
gaacttttctcacctggaatgctggtaagatgtgtggtaagcagtctgggcatcacagac
aggggtaagaagagtgtcaagctgtctctgaaccccaaaaatgtcaacagagtgctgagt
gctgaggccctgaagcctggcatgctacttacaggtaccgtatccagcctggaagaccat
ggctacttagtggacattggtgttgatgggaccagagcttttctgccactgctgaaagcc
caggaatacatcagacagaagaacaaaggtgctaaactaaaggtgggtcagtacctgaac
tgcatcgttgaaaaggtgaaaggcaacggaggagttgttagtctgtctgttggtcactca
gaggtttctactgccattgctactgaagagcagagctggacccttaataacttactacca
ggactggtggtcaaagctcaggtgcagaaggtgactccatttggccttacactaaacttc
ctcacattcttcacgggcgtggttgattttatgcacctggatcccaagaaagctggaaca
tatttctcaaatcaggcagtgagggcttgcatcctctgcgtccatcctcgaaccagagtt
gtgcgcctgagcctgcgccccatgttcctacagcctggacgcccactcacccgactctct
tgccagaaccttggagcggtgctggatgatgttcctgtccagggctttttcaaaaaggct
ggggccaccttcaggctgaaggatgggattctggcgtatgcccggctcagccatctctcg
gattctaagaatgtcttcaatcctgaggccttcaagccagggaacactcacaagtgtaga
attattgactacagccaaatggatgaactggccttgctctctctacgaacatctattatt
gaagctcagtaccttagatatcatgacatcgaacctggggcagtggtaaagggcatagtg
ctaaccataaagtcatatgggatgctggtgaaggtgggcgagcagatgaggggcctggta
cctcccatgcacctggctgacatcctgatgaagaatccggagaagaagtaccacatcggg
gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaagaagctgatgatgacc
ctgaaaaaaaccctggttgagtccaaactacctgtcattacctgctatgccgatgccaag
cctggtctgcagacacatggcttcatcatcagggtcaaggactatgggtgcattgtgaag
ttctacaacaatgtgcagggactggtgcccaagcatgaactcagtaccgagtatatccct
gacccggagagagttttttacactggccaggtggtgaaggttgccgtgttgaactgtgag
ccatccaaagagaggatgctcttatccttcaagctgtcgagtgatccagagccaaagaaa
gagcctgcaggacacagtcagaagaaaggaaaagccgttaacattgggcagttggtagat
gtgaaggttttagagaagaccaaagatgggctggaggtggctgtcctgccgcacaacatc
catgccttcctccccacatctcatctgtcggaccacgttgccaacggcccattgttacat
cattggctccaggcaggtgacatccttcaccgagtcctgtgtctgagccagagcgagggg
catgttcttctttgcaggaagccgaccttggtctccacagtagaaggtggccaggatccc
aagaacttctcagaaatccatcctggaatgctgctcattggttttgtgaagagcatcaag
gactatggcgtgttcatccagttcccctcaggtcttagcggactggccccaaaagctatc
atgagtgataaatttgtaacctccacaagtgaccactttgttgagggccaaacagttgca
gcaaaggtgaccaacgtggatgaggagaagcagcgaatgctgctgtcactgcggctgtcg
gactgtgctctgggggacttggccaccaccagcctcctcctcctgagtcagtgcctggag
gagctgcagggcgtgcgcagcctcatgagcaaccgagactctgtgttgatccggacactg
gctgagatgaccccaggaatgttccttgacctagtggtgcaggaggtgttggaagatggc
tctgtggtattcagtgggggtccggtgcccgacctggtcctgagagccagcagataccat
cgcgcagggcaggaggtggaatctgggcagaaaaagaaggttgtgatcttaaatgttgat
cttttgaagttggaagtgcacgtttcccttcaccaggacttggtgaatagaaaagctaaa
aagctaaggaaaggcagcgaacaccaggcgattgtgcagcacttggagaagtcgtttgct
gttgcctccttggtagagactggccacctggcagctttctcccttacctctcacctcaac
gacaccttccgctttgactcagagaagttgcaggtgggacagggtgtctccctaaccctc
aagaccacagaaccaggagtgactggccttcttttggctgtggaggggccggctgccaag
aggaccatgaggccgacccggaaggactctgagacagttgatgaggatgaagaagtggat
ccagctctgactgtgggaaccataaagaagcacaccctctccatcggggacatggtcaca
gggactgtcaagtccattaagcccacccatgtggttgtgactctggaagatggcatcatt
ggctgtatccatgcctcccacattctagatgatgttccagagggcatctctcctactacc
aaactgaaggttgggaagacggtcactgcccgagtgattggtgggcgagacatgaagaca
ttcaagtttctcccaataagtcaccccagatttgttcgaaccatcccggagctgagtgtt
cggccaagtgagctggaggatggccacactgctcttaacactcactctgttagccctgtg
gagaagattaaacagtaccaggccggccagactgttacttgcttcttaaagaagtacaat
gtggtgaagaaatggcttgaggtggagattgccccagacatccgggggagaattccctta
ttgctcacttctctgagcttcaaggttctgaagcatccagataagaagttccgggttggc
caggccctgagggccaccgttgttggcccagattcctccaaggccttcttatgcctgtcc
ctcataggtcctcacaagcttgaggaaggggaagtggccatgggccgagtggtgaaggtg
actcccaatgagggactgaccgtctccttcccctttgggaagataggaacagtcagtata
tttcacgtgagtgactcctactccgagacgcccctggaagacttcgtcccccaaaaggtt
gtcagatgttacgtcctgtccactacagacagcatattgactttgtcactgcgatcatcc
agaacaaacccggagacgaaaagcaaagtagaagatccagagattaactccatccaggat
attaaggaagggcagcttctgaggggctacgtggggtccatccagccgcatggtgtgttc
tttcgccttggcccctccgttgtgggtttggctcggtactcacatgtctcccagcacagc
ccgtccaagaaagcgctttataacaaacacctccccgaagggaagctgctcacagccagg
gtcttacgcctcaaccaccagaagaaccaggtagagctgtctttcctcccgggagacact
gggaagccagacttgctttctgcttccctggaagggccacttccaaagcaagaggagagg
aaaacagaggctgaggagagagaccagaaaggggaaaagaaaaatcagaaaaagaacgag
aagaagaaccagaaggggcaggaggaggtggagctgcccagcaaggagaagcaacaaccc
cagaagccacaggcgcagaagcggggcgggcgggagcgccgggagtctgggagtgagcag
gaaagagtgagcaagaagccaaagaaagccggcccatcagcggaggacgacagccttatg
gacgtgtactatcgggagggaaaagaggaggcagaagagacgaatgtcctgcccaaggag
aagcaaaccaagccagcagaagtgccccggctgcagctgtcctcaggcttcgcttggaat
gtgggactagactctctgaccccggccttgccacctctagcagagagctcagacagcgag
gaggatgagaagccacaccaagccacgcagaaaaagaaaagcaagaaagaaagggagttg
gagaagcagaaggcagagaaggagctgtcccgcattgaggaggcgctgatgaatcctggg
cggcagccagagtctgcggatgattttgaccgactagtgctcagctcccccaacagctcc
attctgtggctacagtacatggctttccacctgcaggccacggagatcgagaaggcccgt
gccgtggctgagagggcccttaagaccatctccttcagagaggagcaggagaagctgaac
gtgtgggtggctctgctgaacctggagaacatgtacggctctcaggagtccctgaccaag
gtctttgagcgagctgtgcagtacaatgaacctctcaaagtctttctccacctggctgac
atctacgccaagtcagagaaattccaggaagctggtgaactctacaaccggatgctgaag
cgtttccggcaggagaaagctgtgtggatcaaatacggtgccttccttctgcggaggagc
caggctggggccagtcgccgtgtgctgcagcgagccctggagtgcctgcctagcaaggag
catgtggatgtcattgccaagtttgcccagcttgagtttcagctgggggatgcagagcga
gccaaagccatttttgagaacacgctgagcacctacccaaagcgcacagatgtctggtca
gtctacattgacatgaccatcaagcacggcagccagaaggccgtccgggacatctttgag
cgggtcattcatctgagcttggctcccaagagaatgaagttcttcttcaagcgctacctg
gactacgagaagcagcatggcacagagaaggatgtgcaggcagtcaaggccaaggccctg
gagtatgtggaggccaagagctcagtgctggaggactag
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integrated database retrieval system
