Rhinopithecus bieti (black snub-nosed monkey): 108515360
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Entry
108515360 CDS
T04641
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108515360 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108515360 (EDC4)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108515360 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
108515360 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
DUF445
WD40_Prp19
Beta-prop_HPS5
WD40_CDC20-Fz
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
108515360
NCBI-ProteinID:
XP_017707683
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGCSASSFNVWVEGPSAESPRPSSAYNGDLNGLL
VPDPLCSGDGTSTNKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSI
SSKARGSNKVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSE
RTLLKGFTGSVADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTP
LNHFRRIIWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQ
GFIVVKGHSTCLSEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPL
SCLLFCDNHKKQDPDALLPCSVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFS
SVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSF
GIQVVSRCRLRHTEVLPAEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIR
FQPQLNPDVVAPLPTHTAHEDFTFGESRPELGSDGLGSAAHGSQPDLRRIVELPAPANFL
SLSSETKPKLMTPDAFMTPSASLQQITASPSSSSSGSSSSSSSSSSSSLTAVSAMSSTSA
VDPSLTRPPEELTLSTKLQLDGSLTMSSSGSLQASPRGLLPGLLPAPADKLTPKGPGQVP
TAASALSLELQEVEPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAP
EGLEPDSMASAASALHLLSPRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEVALTQEAST
PDSQVWPTAPDITRETCSTLAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDH
DDEVASLASASGGFGTKVPAPRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEH
QVAEPPEDWPALIWQQQRELAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQE
QRRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEP
MAGQLSNSVATKLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSV
VLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTL
QSATEQMAATVASSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSS
IMQAMRSAAGTPVPSAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVD
PAQVFGQPPCPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSV
MAQVRQKLFQFLQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccgacccgcgggcggctgttctgcttcgtccttcaacgtctgggttgaaggc
cccagtgcagagagcccacggccatccagtgcctacaatggggacctcaatgggcttctg
gtcccagacccgctctgctcaggtgatggtacctcaacaaataagactggtcttcggacc
atgccacccattaacctgcaagagaagcaggtcatctgtctctcaggagatgatagctcc
acctgcattgggattttggccaaggaggtggagattgtggccagcagtgactctagcatt
tcaagcaaggcccggggaagcaacaaggtgaaaattcagcctgtcgccaagtatgactgg
gagcagaagtactactatggcaacctgattgctgtgtctaactccttcttggcctatgcc
attcgggctgccaacaatggctccgccatggtgcgggtgatcagtgtcagcacttcggag
cggaccttgctcaagggcttcacaggcagtgtggctgatctggcttttgcacacctcaac
tctccacagctggcctgcctggatgaggcaggcaacctgttcgtgtggcgcttggctctg
gttaatggcaaaattcaagaagagatcttggtccatatccggcagccagagggcacgcca
ctgaaccactttcgcaggatcatctggtgccccttcatccctgaggagagcgaggactgc
tgtgaggagagcagcccgacggtggccctgctgcatgaagaccgggctgaggtgtgggac
ctggacatgctccgctccagccacagcacctggcctgtggatgtcagccagatcaagcag
ggcttcattgtggtaaaaggtcatagcacgtgcctcagtgaaggagctctctcccctgat
gggactgtgctggctactgcgagccatgatggctatgtcaagttctggcagatctacatt
gaggggcaagatgagccaaggtgtctgcacgagtggaagcctcatgatgggcggcccctc
tcctgcctcctgttctgtgacaaccataagaaacaagaccctgatgccttgttgccttgc
agtgttcctttctggaggttccttattactggcgctgaccagaaccgagagctaaagatg
tggtgtacggtgtcctggacctgcctgcagactattcgcttctccccagatatcttcagc
tcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatacctgatt
ctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaaccaggaagag
ggccatgcctgcttcagctccatctcggagttcctgctcacccaccctgtgctgagcttc
ggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcctgccgaagaa
gaaaatgacagcctgggtgctgatggtacccacggagctggtgccatggagtctgcggcc
ggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcagatccgc
ttccagccacagctgaaccctgatgtggtggccccactccccacccacactgcccacgag
gactttacatttggagagtctcggcctgaactgggctctgacggcctggggtcagccgct
cacggctcccagcctgacctccgacgaatcgtggagctgcctgcacccgccaacttcctc
agtctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgacacctagc
gcctccttgcagcagatcactgcctctcccagcagcagcagcagtggtagcagcagcagc
agcagcagcagcagcagcagctcccttacagctgtgtctgccatgagcagcacctcagct
gtggacccctccttgaccaggccacctgaggagctgactttgagcaccaagctgcagctg
gatggcagcctgacaatgagcagcagcggcagcctgcaggcaagcccacgcggcctcctg
cccggcctgctcccagccccagccgacaaactgactcccaaggggccaggccaggtgcct
actgccgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccacaa
gcctcccctagccgcacccgttcccctgatgtcatctcctcagcttccactgccctgtcc
caggacatccctgagattgcatctgaggccctgtcccgtggttttggctcctctgcacca
gagggcctcgagccagacagtatggcttcagccgcctcagcactgcacctactgtcccca
cggccccggccagggcctgagctcggcccccagcttggccttgatggaggccctggggac
ggagatcggcatagtacaccctccctcctggaggtagccttgacccaggaggcctcgact
cctgacagtcaggtttggcccacagcacctgacattactcgtgagacctgcagcaccctg
gcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccgacca
ccatatcacctgctgcagcaacgtgacagtcaggatgccagtgctgagcaaagtgaccat
gatgatgaggtggccagccttgcctctgcttcaggaggctttggcaccaaagttcctgct
ccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaagctc
aaaaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagagcac
caggtggcagagccccctgaggactggccagcgctaatttggcaacagcagagagagctg
gcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtacccaactcgaaggc
ctgcagagcacagtcacaggccacgtagaacgtgcccttgagacccggcacgagcaggag
cagcggcggctggagcgagcactggctgaggggcagcagcggggagggcagctgcaagag
cagctgacacagcagttgtcccaagcactgtcttcagctgtagctgggcggctagagcgc
agcatacgggatgagatcaagaagacagtccctccatgtgtctcaaggagtctggagcct
atggcaggccaactgagcaactcagtggctaccaagctcacagctgtggagggcagcatg
aaagagaacatctctaagctgctcaagtccaagaacttgactgatgccatcgcccgagca
gctgcagacacattacaggggccgatgcaggcggcctaccgggaagccttccagagtgtg
gtgctgccggcctttgagaagagctgccaggccatgttccagcagatcaatgatagcttc
cgactggggacacaggaatacttgcagcagctagaaagccacatgaagagccggaaggca
cgggaacaggaggccagggagcctgtgctggcccagctgcggggcctggtcagcacactg
cagagtgccactgagcagatggcagccaccgtggccagcagtgttcgggcggaggtgcag
caccagctgcatgtggctgtgggcagccttcaggagtccattttagcacaggtacagcgc
atcgtcaagggtgaggtgagtgtggcgctcaaggagcagcaggccgccgtcacctccagc
atcatgcaggccatgcgctcagctgctggcacacctgtcccctctgcccatcttgactgc
caggcgcagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggcactgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtggac
ccagcccaggtttttgggcagccaccctgcccactctctcagcctgtgctcctttccctc
atccagcagctggcatctgaccttggcactcgaactgacctcaagctcagctacctggaa
gaggccgtgatgcatctggaccacagtgaccccatcactcgggaccacatgggctccgtt
atggcccaggtgcgccaaaagctttttcagttcctgcaggctgagccacacaactcactt
ggcaaagcggcccggcgtctcagcctcatgctgcatggtcttgtgacccccagcctccct
tag
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