Rhinopithecus bieti (black snub-nosed monkey): 108515958
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Entry
108515958 CDS
T04641
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04974
Protein digestion and absorption
rbb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108515958 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108515958 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108515958 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108515958 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
108515958 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108515958 (COL2A1)
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108515958 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
108515958
NCBI-ProteinID:
XP_017708641
UniProt:
A0A2K6JRU5
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCQGQDVQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLSPEIPFGECCPICPTDLATTSGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQGARG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGGLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDDCTK
HTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcctcggggctccccagacgctggtgctgctgacgctgctcgtagccgctgtc
cttcggtgtcagggccaggatgtccaggaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagccggagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacgtgaaagactgcctcagccctgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactaccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggggaacaaggacccagaggcgatcgtggagacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagaacctgggacccctggaaat
cctggcccccctggtcctcctggcccccctggtccccctggtcttggtggaaactttgct
gcccagatggctggaggatttgatgaaaaggctggtggcgcccagatgggagtaatgcaa
ggaccaatgggccccatgggacctcgaggacctccaggccctgcaggtgctcctgggcct
caaggatttcaaggcaatcctggtgaacctggtgaacctggtgtctctggtcccatgggt
ccccgtggtcctcctggtccccctggaaagcctggtgatgatggcgaagctggaaaacct
ggaaaagctggtgaaagaggtccgcctggtcctcagggtgctcgcggttttccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttatccaggcctggacggtgctaaggga
gaggcgggtgcccctggtgtgaagggtgagagtggttccccgggtgagaacggatctccg
ggcccaatgggtcctcgtggcctgcctggtgaaagaggacggactggccctgctggtgct
gcgggtgcccgaggcaacgatggtcagccaggccctgcagggcctccgggtcctgtcggt
cctgctggtggtcctggcttccctggtgctcctggagccaagggtgaagccggccccact
ggtgcccgtggtcctgaaggtgctcaaggtcctcgtggtgaacctggtactcctgggtcc
cctgggcctgctggtgcctctgggaaccctggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgctcctggcttccctgggccacggggacctcct
ggccctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggtgaacctggtatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccccgctggcccccaggga
gcccctggacccgctggtgaagaaggcaagagaggtgcccgtggagagcctggtggtgtt
gggcccatcggtccccctggagaaagaggtgctcctggcaaccgcggtttcccaggtcaa
gatggtctggcaggtcccaagggagctcctggagagcgagggcccagtggtcttgctggt
cccaagggagccaatggtgaccctggccgtcctggagaacctggacttcctggagcccgg
ggtctcactggccgccctggtgatgctggtcctcaaggcaaagttggcccttctggagcc
cctggtgaagatggtcgtcctggacctccaggtcctcagggggctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaatggcgagcctggcaaagctggtgagaag
ggactgcctggtgctcctggtctgagaggtcttcctggcaaagatggtgagacaggtgct
gcaggaccccctggccctgctggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtccgccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggtgaagctggagcccctggcctcgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggctctcccggttcccagggcctccaaggtgcccgtggc
ctccccggcactcctggcactgatggtcccaaaggtgcatctggcccagcaggcccccct
ggggctcagggccctccaggtcttcagggaatgcctggcgagaggggagcagctggtatc
gctgggcccaagggtgacaggggtgatgttggtgagaaaggccctgagggagcccctgga
aaggatggtggacgaggcctgacaggtcccattggcccccctggcccggctggtgctaat
ggcgagaagggagaagttggacctcctggtcctgcaggaagtgctggtgctcgtggcgct
ccgggtgaacgtggagagactgggccccccggaccagcaggatttgctgggcctcccggt
gctgatggccagcctggggccaagggtgagcaaggagaggccggccagaaaggcgacgct
ggtgcccctggtcctcagggcccctctggagcgcctgggcctcagggtcctactggagtg
actggccctaaaggagcccgaggtgcccaagggcccccgggagccaccggattccctgga
gctgctggccgcgttggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccctggccga
gctggtgaccctggcctccaaggtcctgctggaccccctggcgagaagggagagcctgga
gatgatggtccctctggtgccgatggtccaccaggtccccagggtctggcgggtcagaga
ggcatcgtcggtctgcctgggcagcgtggtgagagaggattcccaggcttgcctggccca
tcgggtgagcctggcaagcagggcgctcctggagcatctggagacagaggtcctcctggc
cccgtgggtcctcctggcctgactggtcccgcaggtgaacctggacgagagggaagcccc
ggcgctgatggcccccctggcagagatggcgcagctggagtcaagggtgatcgtggtgag
actggtgctgtgggagctcctggatcccctgggccccctggctctcctggccccgctggt
ccaactggcaagcagggagacagaggagaagctggtgcacaaggccccatgggaccctca
ggaccagctggagcccggggaatccagggtcctcaaggcccccgaggtgacaaaggagag
gctggagagcctggcgagagaggcctgaagggacaccgtggcttcactggtctgcagggt
ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccctgtcggtccctctggcaaagatggtgctaatggaatc
cctggccccattgggcctcctggtccccgtggacgatcaggcgaaaccggccctgctggt
cctcctggaaatcctggaccccctggtcctccaggtccccctggccctggcatcgacatg
tccgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcagccggtggcctgagacagcatgatgccgaggtggatgccacactcaag
tccctcaacaatcagattgagagcatccgcagccccgagggctcccgcaagaaccctgca
cgcacctgcagagacctgaaactctgccatcctgagtggaagagtggagactactggatt
gaccccaaccaaggctgcaccttggacgccatgaaggttttctgcaacatggagactggt
gagacttgcgtctaccccaacccagcaaacgttcccaagaagaattggtggagcagcaag
agcaaggagaagaaacatatctggtttggagaaaccatcaatggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctatccacggaaggctcccaaaacatcacctaccactgcaagaatagcattgcctacctg
gacgaagcagctggcaacctcaagaaggccctgctcatccagggctccaacgacgtcgag
atccgggcagagggcaatagcagattcacgtacactgccctgaaggatgactgcacgaaa
cacaccggtaagtggggcaagactgtcatcgagtaccggtcacagaagacctcacgcctc
cccatcattgacatcgcacccatggacataggagggcctgagcaggaattcggtgtggac
atagggccagtctgcttcttgtaa
DBGET
integrated database retrieval system