Rhinopithecus bieti (black snub-nosed monkey): 108516007
Help
Entry
108516007 CDS
T04641
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03082
ATP-dependent chromatin remodeling
rbb04714
Thermogenesis
rbb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108516007 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
108516007 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108516007 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbb03021
]
108516007 (SMARCC2)
03036 Chromosome and associated proteins [BR:
rbb03036
]
108516007 (SMARCC2)
Transcription machinery [BR:
rbb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108516007 (SMARCC2)
Chromosome and associated proteins [BR:
rbb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108516007 (SMARCC2)
PBAF complex
108516007 (SMARCC2)
GBAF(ncBAF) complex
108516007 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_2
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
108516007
NCBI-ProteinID:
XP_017708727
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASH
VVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRK
IHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNY
KKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVT
LPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDN
VTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLN
PQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLAD
TPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKG
KEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSE
HVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVD
PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTS
DEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGD
SEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAA
LAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQ
QLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHG
LAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGP
HGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADS
ISINLPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGS
AAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaatgtggaaatgtttatgactatcgagaagtccttggtgcagaataattgc
ctgtctcgacctaacatttttctgtgcccagaaattgagcccaaactactagggaaatta
aaggacattatcaagagacaccagggaacagtcactgaggataagaacaatgcctcccat
gttgtgtatcctgtcccggggaatctagaagaagaggaatgggtacgaccagtcatgaag
agggataagcaggttcttctgcactggggctactatcctgacagttatgacacatggatc
ccagcgagtgaaattgaagcatctgtggaagatgctccaactcctgagaaacctaggaag
attcatgcaaagtggatcctggacaccgacaccttcaatgaatggatgaatgaggaagac
tacgaagtaaatgatgacaaaaaccctgtctcccgccgaaagaagatttcagcgaagaca
ttgacagatgaggtgaacagcccagattcagatcgacgggacaagaaaggaggaaactat
aagaagaggaagcgctccccctctccttcaccaaccccagaagcgaagaagaaaaatgct
aagaaaggtccctcaacaccttacactaagtcaaagcgtggccacagagaagaggagcaa
gaagacctcacaaaggacatggacgagccctcaccagtccccaatgtagaagaggtgaca
cttcccaaaacagtcaacacaaagaaagactcagagtcggccccagtcaaaggcggcacc
atgactgacctagatgaacaggaagatgaaagcatggagacaacgggcaaggatgaggat
gagaacagtaccgggaacaagggagaacagaccaagaatccagacctgcatgaggacaac
gtgactgaacagacccaccacatcatcattcccagctatgctgcctggtttgactacaat
agcgttcatgccattgagcggagggctctccctgagttcttcaacggcaagaacaagtcc
aagactccagagatctacctggcctatcgaaactttatgattgacacttaccgactgaac
ccccaagagtatcttacctctaccgcctgtcgccgaaacctagcgggtgatgtctgtgcc
atcatgagggtccatgccttcctagaacagtggggtcttattaactaccaagtggatgct
gagagtcgaccaaccccaatggggcctccgcctacctctcacttccatgtcttggctgac
acaccatcagggctggtgcctctgcagcccaagacccctcagggccgccaggttgatgct
gataccaaggctgggcgaaagggcaaagagctggatgacctggtgccagagacggctaag
ggcaagccagagctgcagacctctgcttcccaacaaatgctcaactttcctgacaaaggc
aaagagaaaccaacagacatgcaaaactttgggctgcgcacagacatgtacacaaaaaag
aatgttccctccaagagcaaagctgcagccagtgccactcgtgagtggacagaacaggaa
accctgcttctcctggaggcactggaaatgtacaaagatgactggaacaaagtgtccgag
catgtgggaagccgcacacaggacgagtgcatcttgcattttcttcgtcttcccattgaa
gacccatacctggaggactcagaggcctccctaggccccctggcctaccaacccatcccc
ttcagtcagtcgggcaaccctgttatgagcactgttgccttcttggcctctgtcgtcgat
ccccgagtcgcctctgctgctgcaaagtcagccctagaggagttctccaaaatgaaggaa
gaggtacccacggccttggtggaggcccatgttcggaaagtggaagaagcagccaaagta
acaggcaaggcggacccggccttcggtctggaaagcagtggcattgcaggaaccacctct
gatgagcctgagcggattgaggagagcgggaatgacgaggctcgggtggaaggccaggct
acagatgagaagaaggagcccaaggaaccccgagaaggagggggtgccatagaggaggaa
gcaaaggagaaaaccagcgaggctcccaagaaggatgaggagaaagggaaagaaggtgac
agtgagaaggagtctgagaagagtgatggagacccaatagtcgatcctgagaaggagaag
gagccaaaggaagggcaggaggaagtgctgaaggaagtggtggagtctgagggggaaagg
aagacaaaggtggagcgggacattggcgagggcaacctctccaccgctgctgctgccgcc
ctggctgctgccgcagtgaaagccaagcacttggctgctgttgaggaaaggaagatcaaa
tctttggtggccctgctggtggagacccagatgaaaaagttggagatcaaacttcggcac
tttgaggagctggagactatcatggaccgggaacgagaagcactggagtatcagaggcag
cagctcctggccgacagacaagccttccacatggagcagctgaagtatgcggagatgagg
gctcggcagcagcacttccaacagatgcaccaacagcagcagcagccaccgccagccctg
cccccaggctcccagcctatccccccgacaggggctgctgggccacccgcagtccatggc
ttggctgtggctccagcctctgtagtccctgctcctgctggcagtggggcccctccagga
agcttgggcccttctgaacagattgggcaggcagggtcaactgcagggccacagcagcag
caaccagctggagccccccagcctggggcagtcccaccaggggttcccccccctggaccc
catggcccctcaccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtg
ccaggcagcgggcacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatg
ccgcctcctcctcctcctcctgctccatccatcatcccatttggtagtctagctgactcc
atcagtattaacctcccccctcctcctaacctgcatgggcatcaccaccatctcccgttt
gccccgggcactctccccccacctaacctgcctgtgtccatggcgaaccctctacatcct
aacctgccggcgaccaccaccatgccatcttccttgcctctcgggccggggctcggatcc
gccgcagcccaaagccctgccattgtggcagctgttcagggcaacctcctgcccagtgcc
agcccactgccagacccaggcacccccctgcctccagaccccacagccccgagcccaggc
acggtcacccctgtgccacctccacagtga
DBGET
integrated database retrieval system
