Rhinopithecus bieti (black snub-nosed monkey): 108517180
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Entry
108517180 CDS
T04641
Symbol
COL1A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04611
Platelet activation
rbb04820
Cytoskeleton in muscle cells
rbb04926
Relaxin signaling pathway
rbb04933
AGE-RAGE signaling pathway in diabetic complications
rbb04974
Protein digestion and absorption
rbb05146
Amoebiasis
rbb05165
Human papillomavirus infection
rbb05205
Proteoglycans in cancer
rbb05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108517180 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108517180 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108517180 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108517180 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
108517180 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
108517180 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
108517180 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
108517180 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108517180 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
108517180 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
108517180 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108517180 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108517180 (COL1A2)
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108517180 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
108517180
NCBI-ProteinID:
XP_017710454
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTG
PPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEP
GEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR
GHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSV
GPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNP
GANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNK
GEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGGPGSRGLPGADGRAGVMGPP
GSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPI
GPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQ
GGKGEQGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGLPGPAGARGERGPPGESGAA
GPTGPIGSRGPSGPPGPDGNKGEPGVVGAAGTAGPSGPSGLPGERGAAGIPGGKGEKGEP
GLRGEIGNTGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPA
GPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPSGPNGPPGPAGSRGDG
GPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPP
GFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIA
GPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNNGPVGAA
GAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLP
GLKGHNGLQGLPGLAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIR
GPQGHQGPAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSAPSLRPKDYEVDATLK
SLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTG
ETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLL
ANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKK
TNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGANQEFFVDIGPVCFK
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacctcatgcctagca
acatgccaatctttacaagaggaaactgtaagaaagggcccagctggagatagaggacca
cgtggagaaaggggtccaccaggccccccaggcagagatggtgaagatggtcccacaggc
cctcctggtccacctggtcctcctggcccccctggtcttggtgggaactttgctgctcag
tatgatggaaaaggagttggacttggccctggaccaatgggtttaatgggacctagaggc
cctcctggtgcagctggagccccgggccctcaaggtttccaaggacctgctggtgagcct
ggtgaacctggtcaaactggtcctgcaggcgctcgtggtccagctggccctcctggcaag
gctggtgaagatggtcaccctggaaaacccggacgacctggtgagagaggagttgttgga
ccacagggtgctcgtggtttccctggaactcctggacttcctggcttcaaaggcattagg
ggacacaatggtctagatggattgaagggacagcccggtgctcctggtgtgaagggtgaa
cctggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcctggt
gagagaggacgtgttggtgcccctggccctgctggtgcccgtggcagtgatggaagtgtg
ggtcccgtgggtcctgctggtcccattgggtctgctggccctccaggcttcccaggtgcc
cctggtcccaagggtgaaattggagctgttggtaacgctggtcctgctggtcccgccggt
ccccgcggtgaagtgggtcttccaggcctctccggccccgttggacctcctggtaatcct
ggagcaaacggcctcactggtgccaagggtgctgcaggccttcctggtgttgctggggct
cctggcctccctggaccccgtggtattcctggccctgttggtgctgctggtgctactggt
gccagaggacttgttggtgagcctggtccagctggctccaaaggagagagcggtaacaag
ggtgagcccggctctgctgggccccaaggtcctcctggtcccagtggtgaagaaggaaag
agaggccctaatggggaagctggatctgctggccctccaggacctcctgggctgagaggt
ggtcctggttctcgtggtcttcctggagctgatggcagagctggcgtcatgggccctcct
ggtagtcgtggtgcaagtggccctgctggagtccgaggccccaatggagatgctggtcgc
cctggggagcctggtctcatgggacccagaggtcttcctggttcccctggaaatatcggc
cccgctggaaaagaaggtcctgtcggcctccctggcatcgatggcaggcctggcccaatt
ggcccagctggagcaagaggagagcctggcaacattggattccctggacccaaaggcccc
actggtgatcctggcaaaaacggtgataaaggtcatgctggtcttgctggtgctcggggt
gctccaggtcccgatggaaacaatggtgctcagggacctcccggaccacagggtgtccaa
ggtggaaaaggtgaacagggtcccgctggtcctccaggtttccagggtctgcctggcccc
tcagggccagctggtgaagctggcaaaccaggagaaaggggtctccatggtgagtttggt
ctccctggtcctgctggtgcaagaggggaacgcggccccccaggtgagagtggtgctgcc
ggtcctactggtcctattggaagccgaggtccttctggacccccagggcctgatggaaac
aagggtgaacctggtgtggttggtgctgcaggcactgctggtccatctggtcctagtgga
ctcccaggagagaggggtgctgctggcatacctggaggcaagggagaaaagggtgaacct
ggtctcagaggtgaaattggtaacaccggcagagatggtgctcgtggtgctcctggtgct
gtaggtgcccctggtcctgctggagccacaggtgaccggggtgaagctggtgctgctggt
cctgctggtcctgctggtcctcggggaagccctggtgaacgtggtgaggttggtcctgct
ggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaaggagaa
agaggagccaaagggcctaagggtgaaaacggtgtcgttggtcccacaggccccgttgga
gctgctggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgatgga
ggcccccctggtatgactggtttccctggtgctgctggacggactggtcccccaggaccc
tctggtatttctggccctcctggtccccctggtcctgctgggaaagaagggcttcgtggt
ccccgtggtgaccaaggtccagttggccgaactggagaagtaggtgcagttggtccccct
ggctttgctggtgagaagggtccctctggagaggccggtactgctggacctcctggcact
ccaggtcctcagggtcttcttggtgctcctggtattctgggtctccctggctcaagaggt
gaacgtggtctaccaggtgttgctggtgctgtgggtgaacctggtcctcttggcattgcc
ggccctcctggggcccgtggtcctcctggtgctgtgggtagtcctggagtcaatggtgct
cctggtgaagctggtcgtgatgggaaccctgggaacgatggtcccccaggtcgcgacggt
caacccggacacaagggagagcgtggttaccctggcaacaatggtcccgttggtgctgca
ggtgcacctggtcctcatggccccgtgggtcctgctggcaaacatggaaaccgtggtgaa
actggtccttctggtcctgttggtcctgctggtgctgttggtccaagaggtcctagtggc
ccacaaggcattcgtggtgataagggagagcccggtgataaggggcccagaggtcttcct
ggcttaaagggacacaatggattgcaaggtctgcccggtctcgctggtcaccatggtgat
caaggtgctcctggctccgtgggtcctgctggtcctaggggccctgccggtccttctggc
cctgctggaaaagatggtcgcactggacatcctggtacagttggacctgctggcattcga
ggccctcagggtcaccaaggtcctgctggcccccctggtccccctggcccacctggacct
ccaggcgtaagcggtggtggttatgactttggttacgatggagacttctacagggctgac
cagcctcgctcagcaccttctctcagacccaaggattatgaagttgatgctactctgaag
tctctcaacaaccagattgagacccttcttactcctgaaggctctagaaagaacccagct
cgcacatgccgtgacttgagactcagccacccagagtggagcagcggttactactggatt
gaccctaaccaaggatgcactatggatgctatcaaagtatactgcgatttctctactggc
gaaacctgtatccgggcccaacctgaaaacatcccagccaagaactggtataggagctct
aaggacaagaaacacgtctggctaggagaaactatcaatgctggcagccagtttgaatat
aatgtagaaggagtgacttccaaggaaatggctacccaacttgccttcatgcgcttgctg
gccaactatgcctctcagaacatcacctaccactgcaagaacagcattgcatacatggat
gaggagactggcaacctgaaaaaggctgtcattctacagggctctaatgatgttgaactt
gttgctgagggcaacagcaggttcacttacactgttctcgtagatggctgctctaaaaag
acaaatgaatggggaaagacaatcattgaatacaaaacaaataagccatctcgcctgccc
ttccttgatattgcacctttggacatcggtggtgccaaccaggaattctttgtggacatt
ggcccagtctgtttcaaataa
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