Rhinopithecus bieti (black snub-nosed monkey): 108517465
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Entry
108517465 CDS
T04641
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04613
Neutrophil extracellular trap formation
rbb05014
Amyotrophic lateral sclerosis
rbb05034
Alcoholism
rbb05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
108517465 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
108517465 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108517465 (HDAC6)
09165 Substance dependence
05034 Alcoholism
108517465 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rbb01009
]
108517465 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108517465 (HDAC6)
04131 Membrane trafficking [BR:
rbb04131
]
108517465 (HDAC6)
03036 Chromosome and associated proteins [BR:
rbb03036
]
108517465 (HDAC6)
Enzymes [BR:
rbb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108517465 (HDAC6)
Protein phosphatases and associated proteins [BR:
rbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108517465 (HDAC6)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108517465 (HDAC6)
Membrane trafficking [BR:
rbb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108517465 (HDAC6)
Chromosome and associated proteins [BR:
rbb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108517465 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108517465
NCBI-ProteinID:
XP_017710908
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MEKKGQGARVPTGRQKLGRASQGRSLRKGLRPNRGRGQASSTMTSTGQDSTTTRQRRSRQ
NPQSPTQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIAGLQGMDLNL
EAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
EELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNSYSCACLASGSVLRLVDAV
LGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDAD
YIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKL
ILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL
VRSTETVEGDNMEEDNVEENEEEGPWEPPVLPILTWPVLQSRTGLVYDQSMMNHCNLWDS
HHPEVPQRILRIMCRLEELGLAGRCHTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRE
LHRESSNFDSIYICPSTFACAQLATGAACCLVEAVLSGEVLNGAAVVRPPGHHAEQDAAC
GFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGT
FFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSL
LGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVEDREGPSSSKLVTKKAPQP
AKPRLAERMTTREKKVLEAGMGTITSASFGEESTPGQTKSETAVVALTQDQSSEAATGGA
TLAQTISEAAVGGAMLGQTTSEEAVGGATPDQTTSEKTVGGATLDQTTSEDAVGGATLGQ
TTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQTPLASSTDHQTPPTSPVQ
GTTPQISPSTLIGSLRTLELGSESQGASESQAPGEENLLGEAAGGQDMADSMLMQGSRGL
TDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTMQENWVCLSCYQVYCGRYIN
GHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNIAHQNKFGEDMPHPH
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaggccagggcgctcgcgtccccacgggtcgccagaaacttggcagagcg
agccaagggcggagtttgagaaaggggctgcgtccaaaccgcggcaggggtcaagcctcc
tcaactatgacctcaaccggccaggattctaccacaaccaggcagcgaagaagtaggcag
aacccccaatctcccactcaggactccagtgtcacttcgaagcgaaacattaaaaaggga
gccgttccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaag
ctcggccaagcaatggaagaagacctaatcgcgggactgcaagggatggatctgaacctt
gaggctgaagcactggctgggactggcttggtgttggatgagcagctaaatgaattccat
tgcctctgggatgacagcttcccagaaggccctgagcggctccatgccatcaaagagcaa
ctgatccaggagggcctcctagatcgctgtgtgtcctttcaggcccggtttgctgaaaag
gaagagctgatgttggttcacagcctagaatatattgatctgatggaaacaactcagtac
atgaatgagggagaactccacgtcctagcagacacttacgactcagtttatctgcatccg
aactcatactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtc
ctgggggctgagatccggaatggcatggccatcattaggcctcctggacatcacgcccag
cacagtcttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgct
caacagaaacaccgcatccggagggtccttatcgtagattgggatgtgcaccacggtcaa
ggaacacagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctat
gagcagggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggc
caaggccaaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgac
tacattgctgctttcttgcacgtcctgctgccagtcgccctcgagttccagcctcagctg
gtcctggtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgcc
actccggcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaacctccgcgccctggctgaaggtgtcagtgcttcg
ctccacacccttctgggagacccttgccccatgctggagtcacctggtgccccctgccgg
agtgcccaggcttcagtctcctgtgctctggaagcccttgagcccttctgggaggttctt
gtgagatcaactgagaccgtggagggggacaacatggaggaggacaatgtagaggagaat
gaggaggaaggaccctgggagccccctgtgctcccaatcctgacgtggccagtgctacag
tctcgcacagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagc
caccaccctgaggtaccacagcgcatcttgcggatcatgtgccgtctggaggagctgggc
cttgctgggcgctgccacaccctgacaccgcgccccgccacagaggctgagctgctcacc
tgccacagtgctgagtacgtgggtcatctccgggccacagagaaaatgaaaacccgggag
ctgcaccgtgagagttccaactttgactccatctacatctgccccagtaccttcgcctgt
gcacagcttgccactggcgctgcctgctgcctggtggaggctgtgctctcgggagaggtt
ctgaatggtgctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgt
ggtttttgctttttcaactccgtggctgtggctgctcgccatgcccaggctatcagtggg
cgtgccctgcggatcctgattgtggattgggatgtccaccatggtaatggaactcagcac
atgtttgaggatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcacc
ttcttccccatgggggatgagggtgccagcagtcagatcggccgggctgccggcacaggc
ttcaccgtcaacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcc
tggcatcgcctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctca
gctggctttgatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggt
tatgcccacctcacccacctgctgatgggccttgccagtggccgcattatccttatccta
gagggtggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctc
cttggagacccgccacccctgctgaccctgccacggccccctctatcaggggccctggcc
tcaatcactgagactatccaagtccatcgcagatactggcgcagcttacgggtcatgaag
gtagaagacagagagggaccctccagttctaagttggtcaccaagaaggcaccccaacca
gccaaacctaggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggc
atgggaacgatcacctcggcatcatttggggaagagtccactccaggccagactaagtca
gagacagctgtggtggccctcactcaggaccagtcctcagaggcagccacagggggagcc
acactggcccagaccatctctgaggcagccgttgggggagccatgctgggccagaccacc
tcagaggaggctgtcgggggagccactccggaccagaccacctcagagaagactgtggga
ggagccactctggaccagaccacctcagaggatgctgttgggggagccacgctgggccag
actacctcagaggaggctgtaggaggagctacactggcccagaccacctcggaggcagcc
atggagggagccacactggaccagactacgtcagaggaggctccagggggcaccgagctg
atccaaactcctctagcctcgagcacagaccaccagacccccccaacctcacctgtgcag
ggaactacaccccagatatctcccagtacactgattgggagtctcaggaccttggagcta
ggcagcgaatctcagggggcctcagaatctcaggccccaggagaggagaacctactagga
gaggcagctggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctc
actgatcaggccatattttatgctgtgacaccactgccctggtgtccccatttggtggca
gtatgccccatacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaaca
atgcaagagaattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaat
ggccacatgctccaacaccatggaaattctggacacccgttggtcctcagctacatcgac
ctgtcagcctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtg
aagaacatcgcccaccagaacaagtttggggaggatatgccccacccacactaa
DBGET
integrated database retrieval system
