Rhinopithecus bieti (black snub-nosed monkey): 108517653
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Entry
108517653 CDS
T04641
Symbol
SMARCC1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03082
ATP-dependent chromatin remodeling
rbb04714
Thermogenesis
rbb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108517653 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
108517653 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108517653 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbb03021
]
108517653 (SMARCC1)
03036 Chromosome and associated proteins [BR:
rbb03036
]
108517653 (SMARCC1)
Transcription machinery [BR:
rbb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108517653 (SMARCC1)
Chromosome and associated proteins [BR:
rbb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108517653 (SMARCC1)
PBAF complex
108517653 (SMARCC1)
GBAF(ncBAF) complex
108517653 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
108517653
NCBI-ProteinID:
XP_017711216
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MAAAAGGSGPGAAVGATGSGTAAVAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGSAYKYKXEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGG
KEDEDPAKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
MEADPDGQQPEKAENKVENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDMCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVSLTAPNGMYPPPPQQ
QPPLPPPADGVPPPPAPGPPTSAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcggcgggcggcagcgggcctggggcagcagtaggcgccacgggctcgggg
accgcggcggtagccgcaggcctagccgtttatcgtcggaaggatgggggtccggccacc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcggatgctcctaccaataaaacactggctgggctg
gtggtgcagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaactccctgcaaagtgtttcatggatttcaaagctggaggcaccttatgtcac
attcttgggtctgcttacaagtataaanatgaacagggatggcggaggtttgacctacag
aacccatcccgaatggatcgtaatgtggaaatgtttatgaacattgaaaaaacattggtg
cagaacaattgtttgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcagggaacatttacggatgagaagtca
aaagcttcccaccacatttacccatattcttcctcacaagacgatgaagaatggttgaga
ccggtgatgagaaaagacaagcaagtgttagtgcattggggcttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaa
aagccatggaaggttcatgtgaaatggattttagacactgatattttcaatgaatggatg
aatgaggaggattatgaggtggatgaaaataggaagcctgtgagttttcgtcagcggatt
tcaaccaagaatgaagagccagtcagaagtccagaaagaagagatagaaaagcatcagct
aatgctcgaaagaggaaacattcgccttcgcctccccctccgacaccaacagaatcacgg
aagaaaagtggcaagaaaggccaagctagcctttatgggaagcgcagaagtcagaaagag
gaagacgagcaagaagatctaactaaggatatggaagacccaacacctgtacccaatata
gaagaagtagtacttcccaaaaatgtgaacctaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtagcggatctagatgagcaggatgaagaaacagtcacagcaggagga
aaggaagatgaagatcctgccaaaggtgatcagagtcgatcagttgaccctggggaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagttcttcaatggaaaaaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacgtatcgccta
aacccccaagagtatttaactagcactgcttgtcggaggaacttgactggagatgtgtgt
gctgtgatgagggtccatgcctttttagagcagtggggactcgttaattaccaagttgac
ccggaaagcagacccatggcaatgggacctcctcctactcctcattttaatgtattagct
gatactccctctgggcttgtgcctctgcatcttcgatcacctcaggttcctgctgctcaa
cagatgctaaattttcctgagaaaaacaaggaaaaaccaattgatttgcagaactttggt
ctacgtactgacatttactccaagaaaacattagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttctactcctggaggccctggagatgtataaggat
gattggaacaaagtgtcggaacatgttggaagtcgtactcaggatgaatgcatcctccac
tttttgagacttcccattgaggacccataccttgagaattcagatgcttcccttggacct
ttggcctaccagcctgtcccctttagtcagtcaggaaatccagtcatgagcactgttgct
tttttggcatctgtggtggaccctcgcgtggcatctgctgcagcaaaagcggctttggag
gagttttctcgggtccgggaggaggtaccactggaattggttgaagctcatgttaagaaa
gtacaagaagcagcacgagcctctgggaaagtggatcccacctacggcctggagagcagc
tgcattgcgggcacagggcccgatgagccagagaagcttgaaggagctgaagaggaaaaa
atggaagccgaccctgatggtcagcagcctgaaaaggcagaaaacaaagtggaaaatgaa
acagatgaaggtgataaagcacaagatggagaaaatgaaaaaaatagtgaaaaggaacag
gatagtgaagtgagtgaggataccaaatcagaagaaaaggagactgaggagaacaaagaa
ctcactgatatgtgtaaagaaagagaaagcgatactgggaagaagaaagtagaacatgaa
atttccgaaggaaatgttgccacagccgcagcagctgctcttgcctcagcggctaccaaa
gccaagcacctggctgcagtggaagaaagaaagatcaagtccctggtagctctgttggtt
gagacacaaatgaagaaactagagatcaaacttcgacattttgaagagctggaaactatc
atggacagagagaaagaagctctagaacaacagaggcagcagttgcttactgaacgccaa
aacttccacatggaacagctcaagtatgctgagttacgagcacgacagcaaatggaacag
cagcagcatggccagaaccctcaacaggcccaccagcactcaggaggacctggcctggcc
ccacttggagcagcagggcaccctggcatgatgcctcatcaacagccccctccttaccct
ctgatgcaccaccaaatgccaccacctcatccacctcagccaggtcagatacctggccca
ggttccatgatgcccgggcagcacatgccaggccgcatgattcccactgttgcagccaac
atccacccctctgggagtggccctacccctcctggcatgcctccaatgccaggaaacatc
ttaggaccccgggtatccctgacagcacctaacggcatgtatccccctccaccacagcag
cagccgccgctgccaccacctgcagatggggtccctccgcctcctgctcctggcccacca
acctcagctgctccttag
DBGET
integrated database retrieval system
