Rhinopithecus bieti (black snub-nosed monkey): 108517750
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Entry
108517750 CDS
T04641
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108517750 (HELZ)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
108517750 (HELZ)
3'-5' decay
Other 3'-5' decay factors
108517750 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
Bac_DnaA
AAA_7
AAA_16
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
108517750
NCBI-ProteinID:
XP_017711330
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MQLKGKLQPISTILAKSLTGESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEG
SCNGWHFRPPPRGITSSEEYTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIK
LKQQNENKQLSGSYMETLIEKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTW
TFALTCKPARMLYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNG
LDHYVYKVGIAFNTEIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVT
TAKRWDSSSKTIIDFEPNETTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLH
DLLYIEEIAQYKEISKFNLKVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDT
LAGRLVMTKVNAVYLLPVPKQKLGQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNL
RPDCDTQVELQFQLNRLPLCEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPR
LNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSN
SAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKE
DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLA
GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF
YEGKLMASGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPV
AWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRH
TCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRC
RKFWERFIALCHENNSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGST
NKQQQSPPKGKSLHHTQNDHFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSP
VQRIDPHTGTSILYVPAVYGGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLL
QTHGRGSPIPYGLGHHPPVSIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKK
PTEPKQVDLESNPQNRSPESRPSVAYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHF
HPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQMPPQPNQVVQQQSQLNQQPQQPPPQLS
PAYQAGPNNAFFNNAVAHRPQSPPAEAVISEQQPPPMLQEGHSPLRAITQPGPILPSHLN
SFIDENPPGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPPHHHPHL
QHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPP
QSRLLQYRQVQTRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFSS
PFSLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNH
QHAIGQEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDS
LAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAPPRELIAPPKTVKPP
EDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASAL
RAPPKPRPPPEQAKKSSDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaagggaagctccaacctatatccaccattcttgccaagtcactgacggga
gagtccctgaatgggatggtaacaaaggatttgacaagactaaaaacacttctttcagaa
acagagacagcaactagtaacgccctctctggatatcatgtggaagacttagatgagggg
tcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaatat
actttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtacttca
gcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggctgataaaa
ttgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgatagaa
aagtggatgaattcattgtctcctgagaaagtgcttagtgaatgtatagaaggagtaaag
gtagagcacaatcctgacctgtcagttactgtcagcactaaaaaatcccaccagacatgg
acctttgctctcacctgtaagcctgcaagaatgctgtatcgtgtagcattgctttatgat
gctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccaggta
tcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaatgga
ttagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaactttt
cgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatgatt
gatgcagcttctacagaagatctcgaatacctgatgcatgcaaaacagcagctagtaacc
acagctaaacgttgggattcttcctctaagactattatagattttgaacctaatgaaact
actgatttggagaagagccttcttatcagataccaaattcccctctctgctgaccagcta
tttacccagtctgttttagacaaatcattgaccaagagcaactatcagtcacggttacat
gaccttctttatattgaggagatagcccagtataaagaaatcagcaagttcaaccttaaa
gtgcaattgcagattctagcaagcttcatgctcactggcgtttctggaggtgcaaagtat
gctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagatact
ttggctggacgactggtgatgaccaaagtcaatgctgtttatttgttaccagtccctaaa
cagaagttaggacagacccagggaaccaaagagaaggtttatgaagctactattgaagaa
aaaacaaaggaatatatatttttaaggctatctagggaatgctgtgaagaacttaatctt
cggcctgactgtgacacacaggttgaacttcagtttcaattaaatcgattacccctctgt
gaaatgcactatgcactagacaggatcaaggacaatggggttttgtttccagacatcagt
atgactcccaccataccgtggagtcctaacagacaatgggatgaacagttggatcctcga
ctaaatgcaaaacagaaagaggctgttctggccattaccactccacttgcaatccagctg
ccgcctgtacttatcatcggaccctatgggacaggcaaaacgttcaccctagctcaggct
gtcaaacatattctgcagcaacaggagactagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagtt
gtgcatcagtactgtttgatctcaagtgcacattccacctttcagatgccccagaaagaa
gatattcttaaacatcgagtggtggttgttacattgaatacttcccagtacctctgtcag
ttggaccttgaacctgggttttttacacacattctattagatgaagctgcccaggccatg
gagtgtgaaaccattatgcctctagcattagcaactcaaaacactcggattgtcttggct
ggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaacctt
cacgtttcattacttgaccgactctatgagcattaccctgctgagttcccatgtaggatt
ctcctgtgtgagaactaccgctcccatgaagctatcatcaattacacctctgagcttttc
tatgagggcaaactgatggccagtgggaagcagccagcacacaaagatttctatccacta
actttctttacagcacgaggagaagatgtacaagaaaaaaatagcacagctttttataat
aatgcagaggtgtttgaagtggtggaacgtgtagaagagttaagaaggaagtggccagta
gcgtgggggaagttagatgatggcagtattggtgtggtgactccatatgctgatcaagtg
tttagaatacgtgctgaacttcgaaaaaagagattatctgatgttaatgtagaaagggtg
ctaaacgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaagacat
acttgtaaacataaacagacaccaattaaaaagaaagagcaacttctggaagattccaca
gaggacttagattatggttttttatctaactacaagcttctcaatactgccatcacaaga
gcacaatccctggttgctgtggtgggtgatcccattgctctgtgctctattggaagatgc
aggaaattttgggaacggtttattgccctgtgtcatgaaaacaatagcctacatggaatc
acttttgaacagatcaaggcccagttagaggctttagagctaaagaagacatacgtgttg
aatccgctggcacctgaatttatcccccgggctctcagactgcagcattcaggaagtacc
aacaaacagcagcaatcaccacccaaggggaaaagtcttcatcatacccagaatgatcac
ttccagaatgatggaattgttcagcccaatccttccgtactcattggcaatcctattaga
gcatatactcctccaccccctcttggacctcacccaaatttgggaaaatctccaagccct
gttcaaagaatagatcctcacaccgggacaagtattctttatgtacctgctgtctatgga
gggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtaggttt
gcagttgatcctcgaattattacacatcaggcagcaatggcctataacatgaacctatta
cagacacatggacgaggatctcctattccttatggtcttggacatcacccacctgtcagc
ataggccagccacaaaatcagcatcaggagaaggatcaacatgagcaaaatcgaaatggt
aaaagtgatacaaataattccggacctgaaattaataagattcgaacaccagagaaaaag
ccaacagaaccaaaacaggttgatttggaatcaaatccacagaacagaagtcctgaatca
cgtcctagtgttgcttatcccagtaccaaatttcctcgcaaagataatctcaacccaaga
cacataaatcttccccttcctgctccccatgcacagtatgcaatccctaatcgccatttt
catccccttccccagctaccaagaccaccctttccaattccacagcagcacaccttgtta
aatcagcagcagaataatttgcctgaacaaccaaatcagatgccacctcagccaaatcag
gtagtccagcagcaaagtcagttgaatcagcagcctcagcagccgcctccacagctttct
cctgcatatcaggcaggacccaacaatgctttttttaataatgcagttgctcatcggcca
cagtctcctcctgcagaggctgtgatttcggagcagcagccccctcccatgctgcaagaa
ggccacagtcctctgagagccattacacaacccggccccattcttccttcgcatctgaat
agcttcattgatgagaaccccccaggattacctataggggaggctttagatcgtatacac
gggagtgtcgctctggaaacattaagacagcagcaggcacggttccagcagtggagtgag
catcatgcctttctcagtcagggcagcgttccatacccaccccatcaccatcctcacctc
cagcatcttcctcagccgcccctgggattacatcagccgccagtgcgggcagactggaag
ctcaccagcagtgccgaagatgaagtggagaccacatactcaaggtttcaagacttaatc
agagaactgtctcatcgtgatcaaagtgaaacacgggaactagctgaaatgccaccacct
caatcaagacttttgcaatatagacaagtacagactagaagcccaccagcagtcccatct
cccccatccagtacagaccacagtagccacttttctaactttaatgataacagcagagac
attgaagtagccagcaacccagcatttccgcagcgcctcccaccccagatattcagctca
cctttctcattgccatctgaacaccttgcccctcctcccttgaaatacctggcacctgat
ggagcatggacttttgctaacttgcaacagaatcacctaatggggccaggttttccctat
ggcctacctccattgcctcacaggccaccgcagaacccttttgtacaaatacagaatcat
caacatgctattggtcaagagccatttcacccattgtcatctcgaacagtatcttcttct
tcgctccctagcttagaagagtatgagcccagaggacctggtcggcccttgtaccaaaga
agaatctcatctagctcagttcaaccttgttctgaagaagtaagcactcctcaagacagt
ctggctcagtgtaaagagcttcaggaccacagtaatcaatcttctttcaacttttcatcc
ccggagtcctgggtaaacaccacctcatctactccttatcagaacattccgtgcaatgga
tccagcaggacagctccgcccagagagttgatagcgccacccaagactgtcaaaccccct
gaggatcaactgaagtcggagaacctcgaggtgtccagttccttcaactacagtgtgctg
cagcatctcggccagtttccaccccttatgcccaacaagcaaatcgcggagtcggccaat
agcagtagcccccagagctctgcggggggcaagcctgccatgtcctatgccagcgctctg
cgggcccctccaaagcccaggccccctcctgagcaggccaagaagagtagcgacccgctg
tctctcttccaggaactgagcctgggaagctcatctggcagcaatggcttttactcatat
tttaaataa
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