Rhinopithecus bieti (black snub-nosed monkey): 108517847
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Entry
108517847 CDS
T04641
Symbol
LTN1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbb03009
]
108517847 (LTN1)
04121 Ubiquitin system [BR:
rbb04121
]
108517847 (LTN1)
Enzymes [BR:
rbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108517847 (LTN1)
Ribosome biogenesis [BR:
rbb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108517847 (LTN1)
Ubiquitin system [BR:
rbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108517847 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
HipN
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108517847
NCBI-ProteinID:
XP_017711449
LinkDB
All DBs
Position
Unknown
AA seq
1765 aa
AA seq
DB search
MDRVGGGKGPGGSYYRESSSGARGRKLCSRRVHRGLSAQNTAATATMGGKNKQRTKGNLR
PSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSK
KDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLVSIKTLLVYFCCIFFGWSH
GDSQIYNVDVLVLQDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKKLLCLLPD
NELDSLEEKFKSLLSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPSV
LLSIDDSDPIVCPALWEAVLYTLTTIQDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYP
YLLPFISKLPQSITNPQLDFFKNFLTSLVAGLSTERTKTSSSESLAVISAFFECLRFIMQ
QNLGEEEIEQMLINDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTAH
NLENVLIHFWERLSEICVAKINEPEADVESVLGVSNLLQVLQKPNSSLKSNKKKNGKVRF
ADEIPESNKENEKCVSSEGENIEGWELTTEPSLTHNSSGFLSLLRKKPLEDLVCKLADIS
INYVNEQKSEQHLRFLSTLLDSFSSSRVFKMLLGDENQSIVQAKPLEIAKLAQKNPAVQF
LYQKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIEK
ACSSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESYFSERWTLLSLVLSQH
VKNDYLIGDVYVERIIVKLHETLFKTKESSEAENSDSSVSFICDVAYNYFSSAKGCLLMP
SSEDLLLTLFQLCAQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKDSTFLHLSAV
WLKNQVQASSLDINSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQSL
PMQWLHRPLLEGRLSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKEIVLENN
ELEKIIAELLYSLQWCEELDNPPIFLTGFCEMLQKVNITYDHLRVLGNTSGLLQQLFNRS
REHGTLWSLIIAKLILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKKE
FSAQCIPALLGWTKKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEHE
DIFLFSCNLSEASPEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSEN
QALYSIPLVQLFACVSCDLACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLLP
ILVTVTGENKDVSETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQT
LLNTLAPLLLFRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMSL
LSTQEDLLENVLGCVPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSM
YLRKTKSLNKLLYHLFRLMPENPTYAETAIEVPNKDPKTFFTEELQLSIRETATLPYHIP
HLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQLF
NGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWML
QLSTYLTHQNGSIMEGLALWXNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKF
HSACLYKWFTSSNKSTCPLCRETFF
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggacagggtgggtggtggaaaagggcccgggggaagttattacagggagtcctcttcc
ggcgccagaggccggaagttgtgttccagacgagtccaccggggtctgagtgcccagaat
acagctgcaaccgcgaccatgggcgggaagaacaagcagcgaactaaagggaacctgagg
ccgtcaaacagtggccgagctgcagaactccttgccaaagaacagggaacagtgcctgga
tttattggttttggaacatctcagagtgacctaggctatgttcctgctattcaaggagct
gaagaaattgacagtcttgtagattctgatttccgaatggtgctgcggaagctttcaaag
aaagatgtcaccacaaaattaaaagctatgcaggaatttggaaccatgtgtacagagaga
gacacagaaactgtgaaaggagttcttccatattggccaagaattttttgcaaaatttca
cttgtaagtattaaaactttgctagtttatttctgttgtatattttttggttggagtcat
ggagactcccaaatttataatgttgatgttttggtgctgcaggatcatcttataaaagaa
acacctgatacactcagtgacccgcaaactgttccagaggaagaaagagaagctaaattc
taccgggttgtaacttgttccttgttggcattaaagaaattgctttgccttttacctgat
aatgaactcgattctctggaggagaaatttaagtctcttttatcacagaataagttttgg
aagtatggaaaacacagtgtacctcagattcgctcagcttattttgagttagtttctgca
ttgtgccagcgcattccacagctgatgaaagaggaagcatccaaagtgagcccatcggtt
ctacttagcattgatgacagtgacccaattgtctgcccagctctctgggaagctgtactc
tatacacttacaactattcaggactgttggcttcatgtaaatgcaaaaaagagtgtgttt
cccaagctatcaactgtgattcgtgaaggtggtcggggtctagctactgtcatatatcct
taccttctgccattcatcagcaagctccctcagtccatcacaaatccacagttggatttt
ttcaaaaatttcctcacgtctctagttgctgggctgtcaacagagagaactaaaaccagc
tcttcagagtccttggcagtaatatctgctttttttgaatgcttacgttttataatgcag
caaaacttaggtgaggaagaaattgaacagatgctcatcaatgatcagttgatccctttt
attgatgcagttctcaaagacccagggttgcaacatgggcagctatttaaccatttagca
gaaactctaagttcctgggaagccaaagcagacacggaaaaagatgaaaaaacagctcac
aacttggagaacgtactgatacatttctgggaaagactgtcagagatttgtgtcgcgaaa
atcaatgagccagaagctgatgttgagtccgttttgggtgtatctaacctattacaggtg
cttcagaagccgaatagctcattgaagtcaaataaaaaaaaaaatggtaaggttagattt
gctgatgagatacctgaaagcaataaggagaatgaaaaatgtgtatcttcagaaggagag
aacattgaaggctgggaattaacaactgaaccttctctcactcataattcttcaggcttt
ttgtctctgctaaggaaaaaacctttggaagacttagtctgtaaactcgcagatataagt
attaattatgtcaatgaacaaaagtcagagcaacatctaaggtttctttctactctgctt
gactccttttcttcaagccgagtatttaaaatgctacttggtgatgaaaaccagagtatt
gtccaagccaaacctcttgaaatagccaagcttgcacaaaaaaatcctgcggtgcagttt
ttatatcagaaactgataggctggctaaatgaagatcagaggaaggattttggtttcctg
gtggacattttgtacagtgctctccggtgctgtgacaatgatatggaaagaaaaaaagtc
ttggatgatctaaccaaggtggacctgaaatggaattctcttcttaagattattgaaaag
gcatgttctagttcagataaacatgctttagtaactccttggctaaaaggcgatatcctt
ggtgagaaattggtcaacttggcagattgtctttgtaatgaggacttggaatccagggta
tcttcagaatcttacttctcagaaagatggactcttctaagcttggtgttatcccaacat
gttaaaaatgattacttgattggagatgtatacgttgaaagaattattgttaaacttcat
gaaactttattcaaaacaaaggaatcatcagaagctgaaaatagtgattcatcagtgtct
tttatctgtgatgtggcctataactatttcagctcagcgaaaggatgcttgctaatgcca
tcatctgaagatttattattaactctctttcagttatgtgctcagagcaaagaaaaaaca
catttgccagattttcttatctgtaaactgaaaaatacttggctctccggtgtaaattta
ttggttcatcaaactgacagttcatataaagacagtaccttcctacatttgtctgctgtg
tggctaaagaaccaagttcaggcttcatctttggatatcaacagtctccaagtcctcttg
tctgctgttgatgatttgctaaatacacttctagagagtgaagattcttatcttatggga
gtttatattggaagtgtaatgccgaatgacagtgaatgggaaaagatgaggcagtctctt
cctatgcagtggttacatagacctcttttagagggaagattgagtttgaattatgaatgt
ttcaaaacagattttaaggaacaggacataaagacacttcccagccatttgtgtacttca
gcattattgagcaaaatggtcttaattgcactgagaaaggaaatagtcttagaaaataat
gagcttgagaaaataattgcggaactgctttattcactgcagtggtgtgaagaattagat
aacccacctatttttctaactggattttgtgaaatgcttcaaaaagtgaatattacgtat
gatcacttacgtgtacttggtaatacttctggccttttgcagcagttatttaacaggtcc
agagaacatggcacactgtggtctcttattattgctaagttgatcctttcccgaagcatt
tcatctgatgaagtaaaaccacattataagagaaaagaaagttttttcccactaactgaa
ggcaatttgcataccattcaaagtctatgtccatttttgtcaaaagaagaaaagaaagaa
tttagtgctcaatgtatacctgctcttttgggctggactaagaaagatctttgcagtact
aatggaggttttggacatcttgccattttcaattcttgtttgcaaaccaaaagtatagat
gatggagagctattacatggaatattgaaaatcataatatcctggaagaaagagcatgaa
gatatttttcttttcagttgtaatctatcagaagcaagtccagaggtactgggtgtaaat
atagaaataatccggtttctttccctatttctgaaatattgctcatcccctttggcagag
agtgagtgggacttcatcatgtgctccatgttggcttggttggagacaacaagtgagaat
caggcattgtattctattccacttgtgcaactgtttgcctgtgtcagctgtgatttggcc
tgtgacctcagtgctttctttgattccacaactctggataccattggcaatcttcctgta
aatctaatcagtgaatggaaagaatttttttcccaaggcatccatagtttgcttttacct
attttggtgactgttacaggagaaaacaaagatgtgtctgaaacatcctttcagaatgca
atgctgaaacccatgtgtgaaacattaacatatatctcaaaggaacagctactgagtcac
aaacttcctgcaagattagttgctgaccaaaaaacaaacttaccagaatatctccagact
ttgttaaatacattggccccattacttctcttcagagctaggcctgtgcaaattgctgtt
tatcatatgctatacaaattgatgcctgaattaccgcaatatgatcaggataatctaaag
tcatatggagatgaagaagaagagccagccctgtcaccaccagccgcactgatgtctctt
cttagcactcaagaggacttactagaaaatgttttggggtgtgttcctgttggacagata
gttactattaaaccactgagtgaagacttctgttatgttctgggataccttctcacttgg
aaattaatactcactttcttcaaagccgcgtcatcacagcttcgggctctgtactcaatg
tatcttcggaaaacaaagagtttgaataaattgctctatcacctgttcaggcttatgcca
gaaaatccaacctatgccgagaccgcaattgaggtcccaaataaggaccctaaaacattc
tttactgaggagctccagctgagtattcgagaaacagcaactcttccataccacattcca
cacttggcttgctcagtctatcatatgacattaaaagatttgcctgccatggttaggttg
tggtggaatagcagtgagaagcgtgttttcaatattgtagatagatttacaagcaagtat
gtcagcagtgttctttcttttcaagaaatatcttctgtacaaacaagtacacaactgttt
aatggcatgacggttaaagctcgagctactactcgagaggtaatggctacttatactatt
gaggacatagttattgaacttataatacagctgccttcaaattatccactgggttcaata
acagtagaaagtggcaaaagagtaggagtggctgttcagcagtggcggaactggatgctg
cagttaagcacttacctaacccatcagaatggaagtattatggaaggcttagctttatgg
naaaataatgtagacaaacgttttgagggtgttgaagattgcatgatctgtttctcagtc
attcatggtttcaactattcccttcccaaaaaagcctgtagaacatgcaagaaaaaattc
cattcagcttgcttgtacaaatggtttacatctagcaacaaatccacttgtccactgtgt
cgtgagacgtttttctga
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integrated database retrieval system
