Rhinopithecus bieti (black snub-nosed monkey): 108518151
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Entry
108518151 CDS
T04641
Symbol
ARID1A
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03082
ATP-dependent chromatin remodeling
rbb04714
Thermogenesis
rbb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108518151 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
108518151 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108518151 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbb03000
]
108518151 (ARID1A)
03021 Transcription machinery [BR:
rbb03021
]
108518151 (ARID1A)
03036 Chromosome and associated proteins [BR:
rbb03036
]
108518151 (ARID1A)
Transcription factors [BR:
rbb03000
]
Eukaryotic type
Helix-turn-helix
ARID
108518151 (ARID1A)
Transcription machinery [BR:
rbb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108518151 (ARID1A)
Chromosome and associated proteins [BR:
rbb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108518151 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
KleE
Motif
Other DBs
NCBI-GeneID:
108518151
NCBI-ProteinID:
XP_017711825
LinkDB
All DBs
Position
Unknown
AA seq
2221 aa
AA seq
DB search
MAAQVAPPPPAAWATRPPPARPRAEEAEQQQRGGGGGSAAAAAVEARGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGSGAGGGGGPGAEPDLKNSNGNAGPRPALNNNLTEP
PGAGGGGSSDGVGVPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG
LAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPG
SGAAAAPGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPXGDYGGGPQDXGAGKGPADMASQCWGAAAAAAAAAAAAASGGAQQRSH
HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYP
GQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHP
QQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQTPYSQQPSQPPHQQSPTPYPSQQ
STTQQHPQSQPYCGKNIEYCLLRWGWVKVIFPDILGKDLSGSIDDLPMGTEGALSPGVST
SGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ
MPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHT
GMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHG
QPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHV
AANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAA
SPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMW
VDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVG
TSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQG
PQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRN
SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRA
AGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSR
YPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRH
EGEMYSVPYNTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATE
RRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDM
TYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVPPM
TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH
IAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTL
LDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVAENDEEIAFSGKDKPASENSEEK
LISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTE
LLPSRPHVPCPPAPRKHVTAAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTE
DGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCV
SNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCN
KVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFS
TLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCR
EMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFE
PTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQ
S
NT seq
6666 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgccccgccgccgccagcagcctgggcaacccgcccgccgcccgcc
cgccctcgggctgaagaagccgagcagcagcagcggggaggaggcggggggagcgcggcg
gcggcagcggtcgaagcgcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cctgccgtggggccgccgcagccgctgggaaaggagctgcaagacggggccgagagcaat
gggggtggcggcggcagcggagccggcggcggcggcgggcccggcgcggagccggacctg
aagaactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccg
cccggcgccggcggtggcggcagcagcgatggggtgggggtgcctcctcactcagccgcg
gccgccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgct
gtcgccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggc
ctggcagcgctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcag
aactctcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggctcccggctccaagccgcctccctcctccagcgcctccgcctct
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctcc
gcggctggcgggggaactccccagcccaccgccacccccaccctcaaccaactgctaacg
tcgcccagctcggcccggggctaccagggctaccccnggggcgactacggcggcgggccc
caggacnggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgcg
gcggcggcagcggcggcggcggcggcggccgcttcgggaggggcccaacaaaggagccac
cacgcgcccatgagccccgggagcagtggcggcggggggcagccgctcgcccggacccct
cagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggact
aacccatactcgcagcaacagggacctccgtcaggaccgcagcaaggacatgggtaccca
gggcagccatatgggtcccagaccccgcagcggtacccgatgaccatgcagggccgggcg
cagagtgccatgggcggcctctcttatacacagcagattcctccttatggacaacaaggc
cccagcgggtatggtcaacagggccagactccatattacaaccagcaaagtcctcaccct
cagcagcagcagccaccctactcccagcaaccaccgtcccagacccctcatgcccaacct
tcgtatcagcagcagccacagtctcagccaccacagctccagtcctctcagactccatac
tcccagcagccatcccaacctccacatcagcagtccccaactccatacccctcccagcag
tccacgacacagcagcacccccagagccagccctactgtgggaagaatattgaatattgt
ttactgagatggggatgggtgaaagtaatttttcctgacattttggggaaggatctatct
ggttcaatagatgacctccccatggggacagaaggagctctgagtcctggagtgagcaca
tcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttttctcct
catacttcccctcacctgcctggcatccgaggcccctccccgtcccctgttggctctccc
gccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaaccag
atgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatgaaccaa
tcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccccagtacagt
tccccccagcccggctcagccttatctccgcgtcagccttccggaggacagatacacaca
ggcatgggctcctaccagcagaactccatggggagctatggtccccaggggggtcagtat
ggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaatgccaactac
cccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcagatgcatgga
cagcctggcatcccaccttacggcacacttcctccagggaggatgagtcacgcctccatg
ggcaaccggccttatggccctaacatggctaatatgccacctcaggttgggtcagggatg
tgtcctccaccagggggcatgaaccggaaaacccaagaaactgctgtcgccatgcatgtt
gctgccaactctatccaaaacaggccgccaggctaccccaatatgaatcaagggggcatg
atgggaactggacctccttatggacaagggattaatagtatggctggcatgatcaaccct
cagggacccccatattccatgggtggaaccatggccaacaattctgcagggatggcagcc
agcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaacaac
aaggcagacgggacacccaagacagaatccaaatccaagaaatccagttcttctactaca
accaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatgtgg
gtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctgcctgct
gtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggtgga
ttgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctcaatgtgggc
acatcaagcagtgctgcaagctccttgaaaaagcagtatatccagtgtctctatgccttt
gaatgcaagattgaacggggagaagatcctcccccagacatctttgcagctgctgattcc
aagaagtcacagcccaagatccagcctccctctcctgcgggatcaggatctatgcagggg
ccccagactcctcagtcaaccagcagttccatggcagaaggaggagacttaaagccacca
actccagcatccacaccacacagtcagatccccccattgccaggcatgagtaggagcaat
tcagttgggatccaggatgcctttaatgatggaagtgactccacattccagaagcggaat
tccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatggggcgc
atgtcctatgagccaaataaggatccttatggcagcatgaggaaagctccagggagtgat
cccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctacagtcgtgct
gctggccctgggctaggaaatgtggcgatgggaccacgacagcactatccctatggaggt
ccttatgacagagtgaggacggagcctggaatagggcctgagggaaacatgagcactggc
gccccacagcctaatctcatgccttccaacccagactctgggatgtattctcctagccgc
taccccccacagcagcagcagcagcagcaacgacatgattcctatggcaatcagttctcc
acccaaggtaccccttctggcagccccttccccagccagcagaccacaatgtatcaacag
cagcagcagaattacaagcggccaatggatggcacatatggccctcctgccaagcggcat
gaaggggagatgtacagcgtgccatacaacactgggcaggggcagcctcagcagcagcag
ttgcccccagcccagccccagcctgccagccagcaacaagctgcccagccttcccctcag
caagatgtatacaaccagtatggcaatgcctatcctgccactgccaccgctgctactgag
cgccgaccagcaggcggcccccagaaccaatttccattccagtttggccgagaccgtgtc
tctgcaccccctggcaccaatgcccagcaaaacatgccaccgcaaatgatgggcggcccc
atacaggcatcagctgaggttgctcagcaaggcaccatgtggcaggggcgtaatgacatg
acctataattatgccaacaggcagagcacgggctctgctccccagggccccgcctatcat
ggcgtgaaccgaacagatgaaatgctgcacacagatcagagggccaaccacgaaggcccg
tggccttcccatggcacacgccagcccccatatggtccctctgcccctgtgccccccatg
acaaggccccctccatctaactaccagcccccgccaagcatgcagaatcacattcctcag
gtatccagccctgctcccctgccccggccaatggagaaccgcacctctcctagcaagtct
ccattcctgcactctgggatgaaaatgcagaaggcaggtcccccagtacctgcctcgcac
atagcacctgcccctgtgcagccccccatgattcggcgggatatcaccttcccacctggc
tctgttgaagccacacagcctgtgttgaagcagaggaggcggctcacaatgaaagacatt
ggaaccccggaggcatggcgggtaatgatgtccctcaagtctggtctcctggcagagagc
acatgggcattagataccatcaacatcctgctatatgatgacaacagcatcatgaccttc
aatctcagtcagctcccagggttgctagagctccttgtagaatatttccgacgatgcctg
attgagatctttggcattttaaaggagtatgaggtgggtgacccaggacagagaacacta
ctggatcctgggaggttcagcaaggtgtctagtccagctcccatggagggtggggaagaa
gaagaagaacttctaggtcctaaactagaagaggaagaagaagaggaagtagctgaaaat
gatgaggagatagccttttcaggcaaggacaagccagcttcagagaatagtgaggagaag
ctgatcagtaagtttgacaagcttccagtaaagatcgtacagaagaatgatccttttgtg
gtggactgctcagataagcttgggcgtgtgcaggagtttgacagtggcctgctgcactgg
cggattggtgggggggacaccactgagcatatccagacccacttcgagagcaagacagag
ttgctgccttcccggcctcatgtaccctgcccaccagccccccggaagcatgtgacagca
gcagagggtacgccagggacaacagaccaggagggacccccacctgatggacctccagaa
aaacggatcacagccactatggatgacatgttgtctactcggtctagcaccttgaccgag
gatggagctaagagttcagaggccatcaaggagagcagcaagtttccattcggcattagc
ccagcacagagccaccggaacatcaagatcctagaggacgaaccccacagtaaggatgag
accccactgtgtacccttctggactggcaggattctcttgccaagcgctgtgtctgtgtc
tccaataccattcgaagcctgtcatttgtgccaggcaatgactttgagatgtccaaacac
ccagggctgctgctcatcctgggcaaactgatcctgctgcaccacaagcacccagaacgg
aagcaggcaccactaacttatgagaaggaggaggaacaggaccaaggggtgagctgcaac
aaagtggagtggtggtgggactgcttggagatgctccgggaaaacaccttggttacactc
gccaacatctcggggcagttggacctatccccataccctgagagcatttgcctgcctgtc
ctggacggactcctacactgggcagtttgcccttcagctgaagcccaggaccccttttcc
accctgggccccaatgccgtcctttccccccagagactggtcttggaaaccctcagcaaa
ctcagcatccaggacaacaatgtggacctgattctggccacaccccccttcagtcgcctg
gagaagttgtatagcactatggtgcgcttcctcagtgaccgaaagaacccggtgtgccgg
gagatggctgtggtactgctggccaacctggctcagggggacagcctggcagctcgtgcc
attgcagtgcagaagggcagtatcggcaacctcctgggcttcctagaggacagccttgcc
gccacgcagttccagcaaagccaggccagcctcctccacatgcagaacccaccctttgag
ccaaccagtgtggacatgatgcggcgggctgcccgcgcgctgcttgccctggccaaggtg
gacgagaaccactcagagtttactctgtacgaatcacggctgttggacatctcggtatca
ccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttgattggccag
tcatga
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integrated database retrieval system
