Rhinopithecus bieti (black snub-nosed monkey): 108520396
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Entry
108520396 CDS
T04641
Symbol
COL9A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04820
Cytoskeleton in muscle cells
rbb04974
Protein digestion and absorption
rbb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108520396 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108520396 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108520396 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108520396 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108520396 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
108520396 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rbb00535
]
108520396 (COL9A1)
Proteoglycans [BR:
rbb00535
]
Extracellular matrix (ECM) proteoglycans
Others
108520396 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Toxin_R_bind_N
DUF4882
Motif
Other DBs
NCBI-GeneID:
108520396
NCBI-ProteinID:
XP_017715253
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MKTCWKIPVFFFVCSFLEPWASAAVKRRPRFPANSNSNGENELCPKIRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMT
GSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVAFSYKGLDGSLQTAAFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGPIDTDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEAGKPGAPGKPGTPGADGLTGPDGSPGSVGPKGQKGEPGVPGSRGFPGRGIP
GPLXGPPGTAGLPGELGRVGPVGDPGRRGRPGPPGPPGPSGTIGFHDGDPLCPNACPPGR
SGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGTTGIVGD
KGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGL
PGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGP
MGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGL
PGMKGDRGVVGEPGPKGEQGASGEEGETGERGELGDIGLPGPKGSAGNPGEPGLRGPEGS
RGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEMAA
SLKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGMRGLPGVKGPPGALGLRGPKGDLGE
KGERGPPGRGPKGLPGAVGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGLPG
FCEPASCTMQAGQRAFSKGPDP
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttgctggaaaattccagttttcttctttgtgtgcagtttcctggaaccctgg
gcatctgcagctgtcaagcgtcgccccagattccctgccaattccaattctaatggtgaa
aatgaactctgtcctaagatcaggattggccaagatgacttaccagggtttgatctgatc
tctcagttccaggtagataaagcagcatctagaagagctatccagagagtagtgggatca
gctacattgcaggtggcttacaagttgggaaataatgtagacttcaggattccaactagg
aatttatatcccagtggactgcctgaagaatactccttcttgacgacgtttcgaatgact
ggaagcacactcaaaaagaactggaacatttggcagattcaggattcctctgggaaggaa
caagttggcataaagattaatggccaaacacaatctgttgcattttcatacaagggactg
gatggaagtctccaaacagcagctttttcgaatttgccctccttgtttgattcccagtgg
cataagatcatgattggcgtggagaggagtagtgctactctttttgttgactgcaacagg
attgaatctttacctataaagccaagaggcccaattgacaccgatggctttgccgtgctg
ggaaaacttgcagataatcctcaagtttctgttccatttgaacttcaatggatgctgatc
cattgtgaccccctgcggcccaggagagaaacttgccatgagctgccagccagaataacg
cccagccagaccaccgacgagagaggtcccccgggcgagcagggtcctccagggcctccg
ggcccccctggagttccgggcatagacggcatcgacggtgaccgaggtcctaagggcccc
ccaggccccccgggtcctgcaggtgaagcgggaaagccaggagctccaggcaagcctggc
acacctggcgctgatggattaacaggacctgatggatcccctggctctgttgggccaaag
ggacaaaaaggagaacctggtgtgcctggatctcgtggatttccaggccgtggtattcct
ggacccctgtaaggtcctcctgggacagcaggactccctggagagcttggccgtgtggga
cctgttggtgaccctgggagaagaggacgacccggcccccctggccccccaggacccagt
ggaacaattggctttcatgatggagatccattgtgtcccaatgcctgtccaccaggtcgc
tcaggatatccaggcctaccaggcatgaggggtcataaaggagctaaaggagaaattggt
gaaccaggaagacaaggacacaagggtgaagaaggtgaccagggagaactgggagaagtt
ggagctcaaggacctccaggagcccagggtttgcgaggcaccaccggcatagttggagac
aaaggggaaaaaggtgctcggggcttagatggcgaacctgggcctcagggtcttcctggt
gcacctggtgatcaaggacagcgaggacctccaggagaagcaggtcccaaaggagaaaga
ggggctcaaggtgctagaggaattcctggtcttcctgggcccaaaggagacacgggtttg
ccaggtgtggatggccgtgatgggatccctggaatgcctggaacaaagggtgaaccagga
aaacctgggcctcctggtgatgcaggattgcaggggttaccaggtgtacctggaattcct
ggtgcaaaaggtgttgctggtgaaaagggtagtacaggtgctccagggaagcctggtccg
atgggaaattcaggcaaaccgggccaacaggggcctccaggagaggtgggacccagagga
ccccgggggcttcctggcagtagaggagaattaggaccagtgggatccccaggcctacca
ggtaaactgggttctctgggtagccccggcctccctggcttgcctgggccccctggactt
cctggaatgaaaggtgacaggggtgtagtcggtgaaccgggtccaaagggtgaacagggt
gcctctggtgaagaaggtgaaacaggagaaaggggggaacttggagatataggattacct
ggcccaaagggatctgcaggtaatcctggagagcctggcttgagagggcctgagggaagt
cgggggcttcctggagtggaaggaccaagaggaccacctggaccccggggcgtgcaggga
gaacagggtgccaccggcctgcctggtgtccagggccctccgggtagagcaccgacagat
cagcacattaagcaggtttgcatgagagtcatacaagagcattttgctgagatggctgct
agtcttaagcgtccagactcgggtgcctctgggctccctggaaggcctggccctcctggt
ccccctggccctcctggagagaatggtttcccaggccagatgggaatgcgtggccttcca
ggcgttaaagggccccctggtgcccttggtttgaggggacctaaaggtgacttgggagaa
aagggggagcgtggccctccaggaagaggtcccaaaggtttgcctggagctgtaggtctc
ccaggtgacccaggccctgccagctatgggagaaatggccgagacggtgaacgaggcccc
cccggggtggcaggaattcctggcgtgcctggacccccgggacctcctgggcttcccggt
ttctgtgagccagcctcctgcaccatgcaggctggtcagcgagcatttagcaaagggcct
gacccgtga
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