Rhinopithecus bieti (black snub-nosed monkey): 108520914
Help
Entry
108520914 CDS
T04641
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108520914 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rbb03041
]
108520914 (SNRNP200)
Enzymes [BR:
rbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108520914 (SNRNP200)
Spliceosome [BR:
rbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108520914 (SNRNP200)
Complex C
U5 SnRNP specific factors
108520914 (SNRNP200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
108520914
NCBI-ProteinID:
XP_017715958
UniProt:
A0A2K6N4M1
LinkDB
All DBs
Position
Unknown
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaaccgcccgtagtctgcagtacgagtacaaggcgaactcgaatcttgtg
ctccaagctgaccgttctctcattgaccggacccgccgggatgaacccacaggagaggtg
ctgtcccttgttgggaagctggagggcacccgtatgggagacaaggctcaacggaccaaa
ccgcagatgcaggaggaaagaagagccaagcgaagaaagcgtgatgaggaccggcatgac
atcaacaagatgaagggttacactctgctgtcggagggcattgatgagatggtggggatc
atctacaagcccaaaactaaggagacccgggagacctatgaggtgctgctcagcttcatc
caggctgctcttggggaccagccacgtgatatcctttgtggcgcagctgatgaggttcta
gctgttctaaaaaatgaaaagctgcgggacaaggaaaggcgaaaggagattgacctgctg
ctgggtcaaacagatgataccagataccatgtgctagtcaacctgggcaaaaagatcaca
gactatggtggagacaaggaaatccaaaatatggatgacaacattgatgagacgtatggt
gtgaatgtgcagtttgaatctgatgaggaggaaggtgatgaagatgtgtacggggaggtt
cgagaagaggcatctgatgatgacatggaaggggatgaggctgtcgtgcgctgcaccctc
tcggctaatctcgtggcctcaggtgaactgatgagttccaagaagaaagatttgcaccct
cgggatattgatgcattttggctacagcggcagctcagtcgtttctatgatgatgccatc
gtgtcgcagaagaaggcagatgaagtactggaaattttgaagacggccagtgacgatcgg
gaatgtgagaaccagctggttctgctgcttggtttcaacacctttgatttcattaaagtg
ttgcggcagcacaggatgatgattttatactgtaccttgctggccagtgcacaaagtgaa
gctgaaaaggaaaggattatgggaaagatggaagctgacccagagttatccaagttcctc
taccagctccatgaaaccgagaaggaggatctgatccgagaggaaagatcccggagagag
cgagtgcgtcagtctcgaatggacacagatctggaaaccatggatctcgaccagggtgga
gaggcactggctccacggcaggttctggacttggaggacctggtatttacccaagggagc
cactttatggccaataaacgctgtcagcttcctgatggatccttccgtcgccagcgtaag
ggctacgaagaggtacatgtgcctgctctgaagcccaagccctttggctcagaagaacaa
ctgcttccagtggaaaagcttccaaagtatgcccaggctgggtttgagggcttcaaaaca
ctgaatcggatccagagtaagctctaccgtgctgcccttgagacggatgagaatctgctg
ctgtgtgctcctactggtgctgggaagaccaacgtggccctgatgtgcatgctccgagag
atcggtaaacacatcaacatggacggcaccatcaacgtggatgacttcaagattatctac
attgcccccatgcgctccttggtgcaggagatggtgggcagctttggaaagcgcctggcc
acttatggcatcactgttgctgaactgactggggaccaccagctgtgcaaagaagagatc
agtgccactcagatcatcgtctgcacccccgagaagtgggacatcatcacccgcaagggt
ggcgagcgcacctacacccagctggtgcggctcatcattctggatgagatccatcttctc
cacgatgacagaggtcctgtcttagaagctttggtggcaagggccatccgaaacattgag
atgacccaggaggatgtccgactcattggtctcagtgccaccctacccaactatgaggac
gtagccacctttctgcgtgttgaccctgccaagggtctcttttactttgacaacagcttc
cgtccagtgcctctggaacagacgtacgtgggtatcacagagaaaaaagctatcaagcgt
ttccagatcatgaatgaaatcgtctatgaaaaaatcatggaacatgctgggaaaaatcag
gtgctggtgtttgtccactcccggaaggagactggaaagacggccagggccatccgggac
atgtgcctagagaaggacactctgggtctgtttctgagggagggctcagcctccacggaa
gtcctgcgaacagaagcggagcagtgcaagaacctagagctgaaggatcttctgccttac
ggctttgctattcatcatgcaggcatgaccagggttgaccgaacactcgtggaggatctt
tttgctgataaacatattcaggttttagtttccacagcaactctagcttggggcgtgaat
ctccctgcacatacggtcatcatcaaaggcacccaggtgtacagtccagagaaggggcgt
tggacagaactgggagcactggacattctgcagatgctgggacgtgctggaagaccccag
tatgacaccaagggcgaaggcatcctcatcacgtctcatggggagctgcagtactacctg
tccctcctcaaccaacaacttcctattgaaagccagatggtttcaaagcttcctgacatg
ctcaacgcagaaatcgtgctggggaatgtccagaatgccaaggacgcagtgaactggctg
ggctatgcctacctgtatatccgaatgctgcgatccccaaccctctatggcatctctcat
gatgacctcaagggagatcccctgctggaccagcgccgactggatctggttcacacggct
gccctgatgctggacaagaacaatctggtcaagtacgacaagaagacgggcaacttccag
gtgacagaactgggccgtatagccagccactactacatcaccaatgacacagtgcagact
tacaaccagctgctgaagcccaccctgagtgagattgagcttttcagagtcttctcgtta
tcctctgagttcaagaacatcacagtgagagaggaggagaagctggagctgcagaagttg
ctggagagggtgcccatccctgtaaaagagagcatcgaggaacccagcgccaagatcaat
gttcttctgcaagccttcatctcgcagctgaaattggagggctttgcactgatggctgac
atggtgtatgtcacacagtcggctggccggttgatgcgagcaatatttgaaattgtcctg
aaccgaggttgggcacagcttacagacaagacactgaacctctgcaagatgatcgacaaa
cgcatgtggcagtccatgtgtcctctgcgccagttccggaaactccctgaggaagtagtg
aagaagattgagaagaagaatttcccctttgagcgtctgtacgacctgaatcataatgag
attggggagcttatccgcatgccaaagatggggaagaccatccacaaatatgtccatctg
tttcccaagttggagttgtcggtgcacctgcagcctatcacacgttccaccctgaaggtg
gagctgaccatcacgccggacttccagtgggatgaaaaggtgcatggttcatccgaggct
ttctggattctggtggaggacgtggacagcgaggtgattctgcaccatgagtattttctt
ctcaaggccaagtacgcccaggacgagcacctcattacgttcttcgtgcctgtctttgaa
ccgctgccccctcagtacttcatccgagtggtgtctgaccgctggctctcttgtgagacc
cagctgcctgtctccttccggcacctgatcttgccagagaagtacccacctcccaccgag
cttttggacctgcagcccttgcccgtgtctgctctgagaaacagcgcctttgagagtctt
taccaagataaatttcctttcttcaatcccatccagacccaggtgtttaacactgtgtac
aacagtgacgacaacgtgtttgtgggggcccccacgggcagtgggaagaccatttgtgca
gagtttgccatcctgcggatgctgctgcagagctcggaggggcgctgtgtgtacatcacc
cccatggaggccctggcagagcaggtatacatggactggtacgagaagttccaggacagg
ctcaacaagaaggtggtactcctgacgggagagaccagcacagacctgaagctgctgggt
aaagggaacattatcatcagcacccctgagaagtgggacatactttcccggcggtggaag
cagcgcaagaacgtgcagaacatcaacctcttcgtggtggatgaggtccaccttatcggg
ggcgagaatgggcctgtcttagaagtgatctgctcccgaatgcgctacatctcctcccag
attgagcggcccattcgcattgtggcactcagctcttcgctctccaatgccaaggatgtg
gcccactggctgggctgcagcgccacctccaccttcaacttccaccccaatgtgcgtccc
gtccccttggagctgcacatccagggcttcaacatcagccatacacaaacccgcctgctc
tccatggccaagcctgtgtaccatgctatcaccaagcactcgcccaagaagcctgtcatt
gtctttgtcccgtctcgcaagcagacccgcctcactgccattgacatcctcaccacgtgt
gcggcagacatccagcggcagaggttcttgcactgcaccgagaaggatctgattccgtac
ctggagaagctgagtgacagcacgctcaaggaaacgctgctgaatggggtgggctacctg
catgaggggctcagccccatggagcggcgcctagtggagcagctctttagctcaggagct
atccaggtggtggtggcttctcggagtctctgctggggcatgaacgtggctgcccacctg
gtaatcatcatggacacccagtactacaatggcaagatccacgcctatgtggattacccc
atctacgacgtgcttcagatggtgggtcacgccaaccgccctttgcaggacgatgaggga
cgctgcgttatcatgtgtcagggctccaagaaggatttcttcaagaagttcttatatgag
ccattgccagtggagtctcacctggaccactgtatgcatgaccacttcaatgctgagatc
gtcaccaagaccattgagaacaagcaggacgctgtggactatctcacctggacctttctg
taccgccgcatgacacagaaccccaattactacaacctgcagggcatctcccatcgtcac
ttgtccgaccacttgtcagagctggtggagcagaccctgagtgacctggagcagtccaag
tgcatcagcatcgaggacgagatggatgtggcacctctgaacctgggcatgatcgctgcc
tactattacatcaactacaccaccattgagctcttcagcatgtccctcaatgccaagacc
aaggtgcgagggcttatcgagatcatctccaatgcggccgagtacgagaacattcccatc
cggcaccatgaagacaacctcctgcggcagttggctcagaaggtcccccacaagctgaat
aaccctaagttcaatgatccgcacgtcaagaccaacctgctcctgcaggctcacctgtcc
cgcatgcagctgagtgctgagttgcagtcagatacggaggaaatccttagtaaggcaatc
cggcttatccaggcctgtgtggatgtcctctccagcaatgggtggctcagccctgctctg
gcagctatggaactggcccagatggtcacccaagccatgtggtccaaggactcatacctg
aagcagctgccacacttcacctcggagcatatcaaacgttgcacagacaagggagtggag
agtgttttcgacatcatggagatggaggatgaagaacggaacgcattgcttcagctgact
gacagccagattgcagatgtggctcgcttttgtaaccgctaccctaatatcgaactgtct
tatgaggtggtggataaggacagcatccgcagtggtgggccagttgtggtgctggtgcag
ctggagcgagaggaggaagtcacaggccctgtcattgcgcccctcttcccgcagaaacgt
gaagagggctggtgggtggtgattggagacgcgaagtccaatagtctcatctccatcaag
aggctgaccctccagcagaaggccaaggtgaagttggactttgtggccccagccactggc
gcccacaactacactctgtacttcatgagtgacgcttacatgggatgtgaccaggagtac
aaattcagtgtggatgtgaaagaagccgagacggacagtgattcagattga
DBGET
integrated database retrieval system
