Rhinopithecus bieti (black snub-nosed monkey): 108521290
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Entry
108521290 CDS
T04641
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb05014
Amyotrophic lateral sclerosis
rbb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108521290 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
108521290 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbb03400
]
108521290 (SPG11)
DNA repair and recombination proteins [BR:
rbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108521290 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
108521290
NCBI-ProteinID:
XP_017716514
LinkDB
All DBs
Position
Unknown
AA seq
2494 aa
AA seq
DB search
MEPTGDSREVSAGVTRPSVSRSVHRACPRHNQVPAKMPGSNGRAKMAAEEGAATAASAGG
SWGAAAMERVLPMLLVPVPAEAMGQLGSRAQLHTQQEALGSLTAAGSLQVLSLAPGSRGR
GRCCLEGPFWHFIWEDSRNSSTPTDKPKLLALGENYELLIYEFNLKDGRCDATILYSYSG
EALQKLIEDQDISISLLSLRILSFHNNTSLLFINKCIILHIIFPERDAAIRVLNCFTLPL
PAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLALHEEDMCNEQQQEPAK
ISSFTSLKVSQDLDVVVIVSSSNSAIALNLNLYFRQHPGHLLCERTLEDLPIQGPKGIDE
DDPVNSAYNMKLTKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCAPWFQDILHSESPESG
NHSTGVQSWAFIPQDIMHGQYNFLRKDHTKTSDPGRSWKIMHISEQEEPIDLKCVSVTGF
TALFTWEVERMGYTITLWDLENQGMQCFSFGRKCIPVDSSGEQQLCFVLTEKGLSLILFG
LTQEEFLNRLMIHGSASTVDILCHLNGWGRCSIPIHALEAGIENRQLDTVNFFLKSKENL
FNPSSKSSVSDQFDHFSSHLYLRNVEELMPALDLLCSAIRESYSEPQSKHFSEQLLNLTL
SFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWKLTDAVDEYDVHENVP
TVKESNIWKKLSFEEVIANAILNNRIPEAQTFFRIDSHSAQKLEELIGIGLNLVFDNLKK
NNIKEASELLKNMGFDVKGQLLKICFYTTDKNVLDFVKSLLLFKVEILKEKNYFSEKEKR
TIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKDEFNKQDHR
IVLNWALWWDQLTQESIILPRISPEEYKSYSPEALWRYLTARHDWLNIILWIGEFQTQHS
YASFQQNKWPLLTIDVINQNTCCNNYMRNEILDKLARNGIFLASELEDFECFLLRLSRIG
GVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCPFLEKKELH
EAHPWFEFLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGHTLLALATT
MYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVLPSDITLYH
LIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAVVERLNFAYYLHHGRP
SFAFGTFLVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSVGAACVCFLELLGLDSLKL
RVDMKVANIILRYKCRNEDAQYSFIRESVAEKLSKLADGEKATTEELLVLLEEGTWNSIQ
QQEIKRLSSESSSQWALVVQFCRLHDMKLSISYLRECAKANDWLQFIIHSQLHNYHPAEV
KSLIQYFSPVVQDHLRLAFENLPLVPTSKMDISQVCNKSSQELQGSKEVMTDLFEILLQC
SEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDSVATEAMGYIQD
SIEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCMFFKNYKEA
EAKLLEFQESLEILNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTPYELGKLLQLFVE
REHLFSDGPDVKKLYVLCQILKDTSIAINHIIITCYSIENFQHECKSILERLQTDGQFAL
ARRVAELAELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKKNSISSKAA
SSFFSIQAHVACEHPAGWSTIEERHLLLTLAGHWLAQEDVVPLDKLEELEKQIWLCRITQ
HTLGRNQEETEPKFSRQISTSGELSFDSLAREFSFSKLAALNTSKYLELNSLPSKETCEN
RLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNRDVALVLHCRALASGEASMEDLH
PEIHALLQSAELLEEEPDIPLRRVHSTSSLDSQKFVTVPSSDEVVTNLEVLTSKCLHGKN
YCRQVLCLYDLAKELGCSYTDVAAQDGEAMLREILASQQPDRCKRAQAFISTQGLKPDTV
AELVAEEVTRELLTSSQGTGQKQMFSPTEESQTFLQLTTLCQDHTLVGMKLLDKISSVPH
GELSCTTELLILAHHCFTLTCHMEGIIRVLQAARMLTDNHLAPSEEYGLVVRLLTGIGRY
NEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCR
EIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYAKDSCVRQAQ
HCQRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEAYDFVPDWAE
ILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMAMENLKKLLTYCEDVY
LYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaccggagacagccgagaggtctccgcgggagtcacgaggccgagcgtgagc
cgctccgtacaccgcgcatgcccacgacacaatcaggttccggcgaaaatgcccggaagt
aacggccgggccaagatggctgcagaggagggggccgcgactgctgcttccgccggcggt
agctggggcgccgcggccatggagcgggttctaccgatgctgttggtgccggtccccgcc
gaggcgatggggcagctgggctcccgggcgcagctgcacacacagcaggaggctctgggg
agcctgacggctgcgggcagcctccaggtgctttctttggcgcctggcagccggggccgg
ggtcgctgctgcctggagggccccttctggcactttatatgggaggattctcgtaacagc
agcacaccaactgacaagcccaaactgctcgctcttggtgaaaattatgaactgcttatc
tatgaatttaatttgaaagatggaagatgtgatgcaaccattttgtatagctatagtggg
gaggcattgcaaaagctcattgaagatcaagatatcagtatttccttattgtctttgaga
atcctgtcatttcacaataacacgtcgttattgttcatcaacaaatgcatcatcctacat
attatatttcctgaaagagatgctgcaattagagtactcaactgtttcacactacccttg
cctgcacaggcagtggacatgattattgacacacagctctgcagaggaattctttttgtt
ttgagtagtttaggctggatctacatttttgatgttgtggatggtacgtatgtagctcat
gtggatttagcacttcacgaagaagatatgtgtaatgagcagcaacaggagccagccaag
atttcttcatttacttcactgaaagtgtctcaagacctcgatgttgtagtgattgtcagc
tcatccaactctgcaattgctcttaacttaaatttgtatttcaggcaacacccaggacac
ctactgtgtgaaagaacactagaagaccttcctattcaaggacctaaggggatagatgaa
gatgatcctgttaactctgcctacaacatgaaactgaccaagttttctttccaaattgat
aggtcgtggaaagcccagctatcatcattgaatgaaacaataaagaactccaaactggag
gtttcctgttgtgctccatggttccaggatattttgcattcagagtcacctgaatctggt
aatcacagtacaggtgtacagagctgggctttcattccacaggacataatgcacgggcag
tataattttctacggaaagatcataccaagaccagtgatccaggaagatcatggaagata
atgcacatcagtgaacaagaggaacccatagatcttaaatgtgtgtctgtgacaggattc
actgcactgtttacttgggaagtggaaaggatgggctataccattaccctctgggatttg
gagaaccagggcatgcagtgtttttcctttggcagaaagtgtattcctgtagacagtagt
ggagagcagcaactgtgctttgttttgacagagaaaggactctctctgattttgtttggt
ttgactcaagaagagtttttaaacagactcatgatccatggaagtgccagcactgtggac
attctttgtcatctcaatggctgggggaggtgctccattcccatacatgcactagaggct
gggatagaaaatcgtcagctggacacagtaaatttctttttgaagagcaaggaaaatctt
tttaatccatcctcaaaatcttctgtatctgatcagtttgatcacttttcatcccattta
tacttaagaaatgtggaagagctgatgccagcattggatttactttgctcagcaattaga
gaaagttattctgaaccccaaagcaaacacttttcagaacaattgcttaatcttacactg
tctttccttaacaaccaaataaaggagctttttattcacactgaagaactagatgaacat
ctgcaaaaaggagtgaatattttgactagctacattaatgaacttcgaaccttcatgata
aagtttccttggaagctaacagatgctgtagatgaatatgatgtacatgaaaatgtcccc
acagtaaaggagagcaatatatggaagaaactcagctttgaggaggttattgccaatgcc
attttaaacaacagaataccagaggcacagactttcttcaggattgatagtcattctgct
caaaaacttgaggagctgattggcataggcctaaatttggtctttgacaatttaaaaaag
aacaatataaaggaagcctctgaacttttgaagaatatgggttttgatgtaaaaggccaa
ttgctcaagatatgcttctacacaactgataaaaatgtgcttgattttgtaaagtcactg
cttttattcaaggttgaaattttaaaagaaaaaaattatttttctgaaaaagagaaaaga
actatagacttcgtgcatcaagttgagaagctttatttgggacatttccaagaaaatatg
caaatccagtcatttcccaggtattggataaaagaacaagattttttcaagcacaagtct
gttttggactcattcctgaaatatgattgtaaagatgaatttaacaaacaggaccataga
attgtgttaaattgggctctgtggtgggatcaactaacacaagaatccatcattctcccc
aggataagtccagaagaatacaaatcatattcccctgaagccctctggagatacctcaca
gctcgccatgattggttaaacattatcttatggattggagaatttcaaacccagcatagt
tatgcttcatttcagcagaacaaatggccccttctgactattgatgttattaaccagaat
acttgctgtaacaactacatgaggaatgaaattttagataagctggccaggaatgggatt
tttctggcatctgaactggaagactttgaatgcttcctcctaagactgagccgtattgga
ggtgtaatacaggataccctccctgttcaaaactacaagaccaaagaaggttgggatttc
cattctcaattcattctctattgtttggagcacagtctgcagcatcttctttatgtctac
cttgactgttacaaacttagtcctgaaaattgtccctttttggaaaaaaaagagttacat
gaagcacacccttggtttgaatttttagttcagtgtcgacaagttgccagtaatttaaca
gatcccaaactgatcttccaggctagccttgcaaatgctcagattttgattcccaccaat
caggccagtgtaagcagtatgctattggaaggacataccctcctggcccttgctactaca
atgtattctcctgggggtgtcagccaggttgttcagaatgaagaaaatgaaaactgtttg
aagaaagtggatccccagctattgaagatggcattaactccttaccccaagctaaaaact
gctctcttcccacagtgcactcctcctagtgtcctgccatctgatattacactctaccac
cttattcagtcattatcaccctttgatcctagcagattgtttggctggcagtctgctaac
acactagctataggagatgcatggagtcatctcccacatttctctagccctgacctggtt
aataaatatgctgtagtggaacgtctgaattttgcttattatttacatcatggacggcca
tcatttgcatttggtacttttctggtccaggaattaatcaagagcaagactcccaagcag
ctgatccagcaagtaggcaatgaagcctatgtcatagggctctcctccttccacatacct
tcagtaggagctgcatgtgtttgtttcttagaattgcttggccttgacagcctgaaactc
agagttgatatgaaagtggccaatatcattttgagatacaagtgcagaaatgaagatgct
cagtacagctttatcagagagtctgtagccgaaaaactatctaaactagctgatggtgaa
aaggcaaccacagaagaattgcttgttctcttagaagaaggtacatggaacagcattcag
caacaggaaataaagaggttatccagtgaatctagcagccagtgggcattagtggtacag
ttctgcaggctacacgatatgaaactaagcatatcttaccttagagaatgtgccaaagca
aatgattggctgcagttcattattcacagccaactccacaactaccacccagcagaggtg
aaatcccttatccagtacttcagcccagtcgttcaagaccacttacggctggcttttgag
aacttgcccttagtgcccacctccaaaatggacatcagtcaagtctgcaataagtcctcc
caggaacttcagggaagcaaagaagtgatgaccgatttatttgaaattctgctccaatgc
tcagaggagccagactcctggcactggcttctggttgaagcagtgaaacaacaggcgcct
atcctcagtgttctggcctcatgtctccagggtgccagtgccatttcttgtctctgtgtt
tggatcatcacttctgtggaggacagtgttgcaactgaagcaatgggatacattcaggac
tcgatagaggaccatacctggaaccttgaggatctttcagtcatctggagaacattatta
acaagacagaagagcaaaactctcatcagaggtttccaacttttctttaaggattcccca
ttactgttggtgatggagatgtatgaactatgtatgttcttcaagaattataaagaagct
gaagctaaacttctggagtttcaggagagccttgaaatacttaacacagcagccacaaag
gtccaccctgtcatccctgctatgtggctggaggatcaggtgtgtttccttttgaagctt
atgctacagcagtgtaagaccccatatgagctggggaagcttttacagctctttgttgaa
agagagcatctcttctctgatggtccagatgtgaaaaagctgtatgtcctttgccaaatt
ttgaaggatacatccatagccattaatcatataattattacctgctacagcattgagaat
tttcagcatgaatgtaaatctattttggaaagactgcagacagacgggcagttcgctttg
gccaggagggtagcagaattagctgagttacctgtggacaacttggttattaaagagata
acacaggaaatgcagactctaaaacacattgaacagtggtcactaaaacaagcaagaatt
gacttctggaaaaaatgccatgagaattttaagaaaaattcaatttcaagcaaagcagct
tcttcctttttctcaattcaggcccatgtggcatgtgagcacccagctggatggagcacc
attgaggaacgccatctgctgctcactttggcagggcactggcttgcccaagaggacgta
gtgcccttggacaagctggaggagctggagaagcagatctggctctgccgcatcacccag
cacactcttggaagaaatcaggaggaaacagagcccaaattttctcgacagatctcaacc
agtggtgaactttcctttgatagtttagccagggagttttccttctccaagttggctgct
ctgaacacatcaaaatacttagaacttaacagccttccatccaaagagacatgcgagaat
agactggattggaaagagcaggagtcactaaactttttgattgggcgcctactggatgat
ggctgtgtgcatgaagcaagtagagtatgccggtattttcatttctataatcgagatgtc
gccttggtgttgcactgcagagcactggcctcaggagaagctagtatggaggatctgcac
ccggagatccatgctctcctacaaagtgctgagctgcttgaggaagaacccgacattccc
ctaaggagagtccacagcacttcaagtctggatagtcagaagtttgtgacagtgccctcc
agtgatgaagtggtgactaacctggaagtgctgacaagtaaatgcctccatggaaaaaac
tactgtcgacaggtcctctgtctgtatgatcttgccaaggagttgggctgttcctacaca
gatgttgctgctcaggatggtgaagccatgctccgggaaatcttggcctctcagcagcct
gaccgatgcaaacgagcccaggccttcatcagcacacagggccttaagccagatactgtg
gctgaactcgtggcagaagaggtgacacgggagctgcttacttcatcacagggaacagga
cagaagcagatgttcagcccaacagaggaaagccagacatttcttcagctgaccactctg
tgtcaagaccacacattggtaggcatgaagttgttggataagatttcctccgttccccat
ggggaattgtcttgcaccacagagctcctgatcctggcccatcattgcttcaccctgacg
tgccacatggagggcatcatccgagtcctacaggccgcccggatgctcacagataaccac
ctggcccccagtgaggagtatggactggtggtacggctcctcactggcattggaaggtac
aatgagatgacatacatatttgatttgctgcataaaaagcactactttgaagtgctgatg
aggaagaagttggatccgagtggtaccctgaagacagccctgctggactacatcaaacgc
tgccgtcctggagacagtgagaagcacaatatgattgccctgtgcttcagcatgtgccgg
gagattggcgagaaccacgaggcagctgcccgcatccaactgaaattgattgagtctcag
ccctgggaggacagtctcaaggatgggcaccagctgaagcaactgctgctgaaggccctg
actctgatgctggatgcagcagagagttatgccaaggactcttgtgtgcgacaggcccag
cactgtcagcggctcaccaagttgataactctgcagattcactttctgaacactggccag
aacacaatgctcatcaacttgggccgccacaagctaatggactgtattctggccctacct
cggttctaccaggcttctattgtggctgaggcctatgattttgttccagattgggctgaa
attttataccagcaagtgatacttaaaggagactttaattacttggaagaatttaagcag
caaaggttattaaagtccagtatatttgaagagatttccaaaaaatataaacaacatcag
cctactgacatggccatggaaaacctgaagaaattactcacatattgtgaagatgtttac
ctgtattacaagttggcatatgaacacaagttttatgaaattgtaaatgtgcttctgaag
gaccctcagacaggttgctgtctaaaggacatgctagcaggttag
DBGET
integrated database retrieval system
