Rhinopithecus bieti (black snub-nosed monkey): 108522321
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Entry
108522321 CDS
T04641
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03082
ATP-dependent chromatin remodeling
rbb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108522321 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108522321 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbb03021
]
108522321 (PBRM1)
03036 Chromosome and associated proteins [BR:
rbb03036
]
108522321 (PBRM1)
Transcription machinery [BR:
rbb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108522321 (PBRM1)
Chromosome and associated proteins [BR:
rbb03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
108522321 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108522321
NCBI-ProteinID:
XP_017717916
LinkDB
All DBs
Position
Unknown
AA seq
1665 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRSCRGTSISQLYSAVFVVSPLP
ARSEMTHYHNYLPASTLKVATNLQYITKVIFFLFANIQPDSPEYKAACKLWDLYLRTRNE
FVQKGEADDEDDDEDGQDNQGTVTEGSSPTYLKEILEQLLEAIVVATNPSGRLISELFQK
LPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVF
KDANSIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKY
YRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLY
DTVRSCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLEC
DLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSA
KRKSKVNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKI
IEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPD
DDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSR
SELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDAL
VLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAV
DPNFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQ
FFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEK
SEDSSGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGE
KWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPEN
FRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDE
KNTDNSEDSRAEDSFNLEKEKEDVPVEMSNGEPGCHYFEQLHYNDMWLKVGDCVFIKSHG
LVRPRVGRXNXKVWVRDGAAYXYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCI
LGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIY
YFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPL
ASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGEL
SRLVGTEWRNLETAKKAEYEGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVAPMAGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENV
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaagagaagaagagctacctccccttctagcagtgtcagcggggacttt
gatgatgggcaccattctgtgtcaacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaactgtagatcctattgccgtgtgccatgaactctataacaccatccgagac
tataaggatgaacagggcagacttctctgtgagctcttcattagggcaccaaagcgaagt
tgtcgaggtacaagtattagccaactctattctgcggtctttgtggtatcacccttgcct
gcacggtctgagatgactcactaccacaactaccttccagccagtactttaaaagtagca
actaatctccaatacattactaaagtgattttttttctttttgctaacatacagccagat
tctcctgaatataaagctgcttgcaaactctgggatttgtaccttcgaacaagaaatgag
tttgttcagaaaggagaagcagatgatgaagatgatgatgaagatgggcaagacaatcag
ggcacagtgactgaaggatcttctccaacttacttgaaggagatcctggaacagcttctt
gaagccatagttgtagctacaaatccatcaggacgtctcattagcgaactttttcagaaa
ctgccttctaaagtgcaatatccagattattatgcaataattaaagagcctatagatctc
aagaccattgcccagaggatacagaatggaagctacaaaagtattcatgcaatggccaaa
gatatagatctcctcgcaaaaaatgccaaaacttacaatgagcctggctctcaagtattc
aaggatgcaaattcaattaaaaaaatattttatatgaaaaaggctgaaattgaacatcat
gaaatggctaagtcaagtcttcgaatgaggactccatccaatttggctgcagccagactg
acaggtccttcacacagtaaaggcagccttggtgaagagagaaatcccactagcaagtat
taccgcaataaaagagcagtacaaggaggtcgtttatcagcaattacaatggcacttcag
tatggctcagagagtgaagaagatgctgctttagctgctgcacgttatgaagagggagag
tcagaagcagaaagcatcacttcctttatggatgtttcaaatcctttttatcagctttat
gacacagttaggagttgtcggaataaccaagggcagctaatagccgaaccttttttccat
ttgccttcaaagaaaaaataccctgattattaccagcaaattaaaatgcccatatcacta
caacagatccgaacaaaactgaagaatcaagaatatgaaactttagatcatttggagtgt
gatctgaatttgatgtttgaaaatgccaaacgctataatgtgcccaattcagccatctac
aagcgagttctaaaattgcagcaagttatgcaggcaaagaagaaagagcttgccaggaga
gacgatattgaggacggagacagcatgatctcttcagccacctctgatactggtagtgcc
aaaagaaaaagcaaggtaaacataagaaagcagcgaatgaaaatcttattcaatgttgtt
cttgaagctcgagagccaggttcaggcagaagactttgtgacctatttatggttaagcca
tccaaaaaggactatcctgattattataaaatcatcttggagccaatggacttgaaaata
attgagcataacatccgcaatgacaaatacgcaggtgaagagggaatgatagaagacatg
aagctgatgttccggaatgccaggcactataacgaggagggctcccaggtgtacaacgat
gcacatatcctggagaagttactcaaggagaaaaggaaagagctgggaccattgcctgat
gatgatgacatggcttctcccaaactcaagctgagtaggaagagtggcatttctcctaaa
aaatcaaaatacatgactccaatgcagcagaaactaaatgaggtctatgaagctgtaaag
aactatactgataagagaggtcgccgcctcagtgccatatttctgaggcttccctctaga
tctgagttgcctgactactatctgactattaaaaagcccatggacatggaaaaaattcga
agtcacatgatggccaacaagtaccaagatattgactctatggttgaggactttgtcatg
atgtttaataatgcgtgtacatacaatgagcctgagtctttgatctacaaagatgctctt
gtcctacacaaagtcctgcttgaaacacgcagagacctggagggagatgaggactctcat
gtcccaaatgtgactttgctgattcaagagcttatccacaatctttttgtgtcagtcatg
agtcatcaggatgatgagggaagatgctacagtgattctttagcagaaattcctgctgtg
gatcccaactttcctaacaaaccaccccttacatttgacataattaggaagaatgttgaa
aataatcgctaccggcggcttgatttatttcaagagcatatgtttgaagtattggaacga
gcaagaaggatgaatcggacagattcagaaatatatgaagatgcggtagaacttcagcag
ttttttattaaaattcgtgatgaactctgcaaaaatggagagattcttctttcaccggca
ctcagctataccacaaaacatttgcataatgatgtggagaaagagaaaaaggaaaaattg
ccaaaagaaatagaggaagataaactaaaacgagaagaagaaaaaagagaagctgaaaag
agtgaagattcctctggtgctgcaggcctttcaggcttacatcgcacatacagccaggat
tgtagctttaaaaacagcatgtaccatgttggagattatgtctatgtggaacctgcagag
gccaacctacaaccacatatagtctgtattgaaagactgtgggaggattcagctggtgaa
aaatggttgtatggctgttggttttaccgaccaaatgaaacattccacctggctacacga
aaatttctagaaaaagaagtttttaagagtgactattacaacaaagttccagttagtaaa
attctaggcaagtgtgtggtcatgtttgtcaaggaatactttaaattatgcccagaaaac
ttccgagatgaggatgtttttgtctgtgaatcacggtattctgccaaaaccaaatctttt
aagaaaattaaactgtggaccatgcccatcagttcagttaggtttgtccctcgggatgtg
cctctgcctgtggttcgcgtggcctctgtatttgcaaatgcagataaaggtgatgatgag
aagaatacagacaactcagaggacagtcgagccgaagacagttttaacttggaaaaggaa
aaagaagatgtccctgtggaaatgtccaatggtgaaccagggtgccactactttgagcag
ctccattacaatgacatgtggctgaaggttggcgactgtgtcttcatcaagtcccatggc
ctggtgcgtcctcgtgtgggcaggtgaaattgaaaagtatgggttcgagatggagctgca
tatntttatggccccatcttcattcacccagaagaaacggagcatgagcccacaaaaatg
ttctacaaaaaagaagtatttctgagtaatctggaagaaacctgccccatgacatgtatt
ctcggaaagtgtgctgtgttgtcattcaaggacttcctctcctgcaggccaactgaaata
ccagaaaatgacattctgctttgtgagagccgctacaatgagagtgacaagcagatgaag
aaattcaaaggattgaagaggttttcactctctgctaaagtggtagatgatgaaatttac
tacttcagaaaaccaattgttcctcagaaggagccatcacctttattggaaaagaagatc
cagttgctagaagctaaatttgctgagttagaaggtggagatgatgatattgaagagatg
ggtgaagaagatagtgaggtcattgaacctccttctctacctcaacttcagacccccctg
gccagtgagctggacctcatgccctacacacccccacagtctaccccaaagtctgccaaa
ggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagtggctacatcctgttc
agcagtgagatgagggctgtgattaaggcccaacacccagactactctttcggggagctc
agccgcctcgtggggacagaatggagaaatcttgagacagccaagaaagcagaatatgaa
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcctggcctcccgggcatcccaccaccgggtgtgatgaaccaaggagtggcc
cctatggcagggactccagcaccaggtggaagtccatatggacaacaggtgggagttttg
gggcctccagggcagcaagcaccacctccatatcccggcccacatccagctggacccccc
gtcatacagcagccaacaacacccatgtttgtagctcccccaccaaagacccagcggctt
cttcactcagaggcctacctgaaatatattgaaggactcagtgctgagtccaacagcatt
agcaagtgggatcagacactggcagctcgaagacgcgacgtccatttgtcaaaagaacag
gagagccgcctaccctctcactggctgaaaagcaaaggggcccacaccaccatggcagat
gccctctggcgccttcgagatttgatgctccgggacaccctcaacattcgccaagcatac
aacctagaaaatgtttaa
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integrated database retrieval system
