Rhinopithecus bieti (black snub-nosed monkey): 108522717
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Entry
108522717 CDS
T04641
Name
(RefSeq) collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04382
Cornified envelope formation
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04820
Cytoskeleton in muscle cells
rbb04926
Relaxin signaling pathway
rbb04933
AGE-RAGE signaling pathway in diabetic complications
rbb04974
Protein digestion and absorption
rbb05146
Amoebiasis
rbb05165
Human papillomavirus infection
rbb05200
Pathways in cancer
rbb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108522717
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108522717
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108522717
09142 Cell motility
04820 Cytoskeleton in muscle cells
108522717
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108522717
09154 Digestive system
04974 Protein digestion and absorption
108522717
09158 Development and regeneration
04382 Cornified envelope formation
108522717
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108522717
09162 Cancer: specific types
05222 Small cell lung cancer
108522717
09172 Infectious disease: viral
05165 Human papillomavirus infection
108522717
09174 Infectious disease: parasitic
05146 Amoebiasis
108522717
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108522717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbb04147
]
108522717
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108522717
Exosome [BR:
rbb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108522717
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108522717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108522717
NCBI-ProteinID:
XP_017718588
LinkDB
All DBs
Position
Unknown
AA seq
1530 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPS
GPQGFTGSTGLSGLKGERGSPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPSSFKGMKGDPGLPGLDG
ITGPQGAPGSPGAVGPAGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGSTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGEKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLPGLKGDEGIQGLRGPSGVPGSPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAG
LPGRDGLPGPPGPPGPPSPEFETKTLHNKEPGFPGLRGEQGPKGNPGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPRGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGSPGPSGPKGK
KGEPILSTVSGMPGDRGDSGSQGFPGIIGKPGNDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHPGPPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGPPGSKGITLPCIIPGSYG
PSGFPGTPGFPGPKGYRGLPGTPGQPGSSGNKGKPGSPGLVHLPELPGFPGPRGEKGLPG
FSGLPGKDGLPGTIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGDKGLLGDSGLPGL
KGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGPPGAPGFPGTSGHPGK
KGTRGEKGPPGSIVKKGLPGLKGLPGNPGLIGLKGSPGSPGVTGLPALSGPKGEKGSVGF
VGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGHAGTPGEKGDRGNLGPVGIPSPRRPMSN
LWLKGDKGSQGSAGSDGFPGPRGDKGEAGHPGPPGLPGASGLPGTIKGVSGNPGPPGFMG
IRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGTSGLPGLKGKEHYCFLLMCSSRAS
IFHDFIGTKGRDGPIGNIGFPGNKGEDGKVGVSGDVGLRGALGFPGIAGMRGDPGLPGSS
GHQGAIGPLGPPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKG
EKGYPGIGIRAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLD
GERGRPGPPGPPGPTGPSSSQGNTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLKGMR
GEPGFMGTPGKVGPPGDPGFPGMKGKAGPRDHCCLATMDPTTDCLSLCYLCISGHWQMLP
DCLSPTGPSAQCWAPRRQDEYDPVPALVELPSHRGERWIKKALYNITQCHPGDIQISCGD
KQGSSGPQGAPGQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIP
GKDGPSGLPGPPGALGDPGLRGLQGPPGFE
NT seq
4591 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagtcttatggaaagccgtgtgggggccaagactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagagggcgacctggaccaattggaattcaaggcccatca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggttcc
ccaggccttctgggaccttatggaccaaaaggagataagggtcccatgggagttcctgga
tttcttggcatcaatgggattccgggccatcctggacagccaggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgtcggatttccaggccctgatggctat
cctgggcttctcggaccacctgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaagtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggcccacaaggagcacccggatctcctggagctgtaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggtcctcctggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggatctactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagaaagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtgaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagaccct
ggtgtacctggcctcccaggccttaaaggagatgaaggcatccagggcctgcgtggccca
tctggtgtccctggctcaccagcattatcaggtgtcccaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagcagctggc
ctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctagtccagaa
tttgagaccaaaactctacacaacaaagagccagggttccctggtctccgaggagaacag
ggtccaaaaggaaacccaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccacggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggtctccgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacagtctcaggaatgccaggggatcgcggtgattctggc
tcccagggcttccctggtataataggaaaaccaggcaacgacggagtaccaggtctacca
ggtctgccaggacttccgggtgatggtgggcagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcctggtccacctggcctcccgggaattgggttacca
ggacttcctggaccccgtgggcttcctggagataaaggcaaggatggattaccgggacaa
caaggccctcctggatctaagggaatcaccctgccctgtattattccggggtcatatggt
ccatcaggatttccaggcactcccggattcccaggccctaaagggtaccgaggcctccct
gggaccccaggccagcctggatcaagtggaaataaaggaaagccagggagtccaggattg
gttcatcttcctgaattaccaggatttcctggacctcgtggggagaagggcttgcctggg
ttttctgggctccctggaaaagatggcttgcctgggacgattggtagtccaggtttacct
ggttccaagggagccactggtgatatctttggtgctgaaaatggtgctccgggggaacaa
ggcctacaaggattaacaggggacaaaggacttcttggagactctggccttccaggactc
aagggtgtgcacgggaaacctggcttgctaggccccaaaggtgagcggggcagccctgga
acaccaggacaggtgggacagccaggcaccccaggatctagtggtccgtatggcatcaag
ggcaaatctggtcccccaggagcgccaggcttcccaggcacctcagggcatcctggaaag
aaaggaacaagaggcgagaaaggccctcctggatcaatagtaaagaaagggctgccaggg
ctaaaaggccttcctggaaatccaggcctaatagggctgaaaggaagcccaggctctcca
ggggtcactgggttgccagccctctctggacccaaaggagaaaaggggtctgttggattc
gtaggttttccaggaataccaggtctgcctggtatccctggaacaagaggattaaaggga
attccaggatcaactggaaaaatgggaccatctggacacgctggcactcctggtgaaaag
ggagacagaggcaatctggggccagtcggaatacctagtccaagacgtccaatgtcaaac
ctttggctcaaaggagacaaaggctctcaaggctcagccggatctgatggatttccaggg
ccaagaggtgacaaaggagaggctggtcatcctgggccaccaggcctgcctggagcttct
ggcctcccaggcactatcaaaggagttagtggaaacccaggtccccctggcttcatggga
atccggggcttacctggcctgaaggggtcctctgggataacaggtttcccaggaatgcca
ggagaaagtggttcacaaggtatcagagggtcgcctggactcccaggaacatctggtctc
ccaggcctgaaaggtaaggagcattattgttttcttttaatgtgttcttctagagcaagc
atttttcatgattttataggcacaaaaggaagagatggaccaataggcaatataggcttc
cctggaaacaaaggtgaagatggaaaagttggtgtttctggagatgttggccttcgtgga
gctctagggtttccagggattgccggcatgagaggagatccaggacttccaggctcttct
ggtcatcaaggggcaattgggcccctaggaccccccggattaataggacccaaaggcttc
cctggatttcctggtttacatggactgaatgggcttccgggaaccaagggtacccatggc
actccaggacctagtatcactggtgtgcccgggcctgctggtctccctggacccaaagga
gaaaaaggatatccaggaattggcatcagagctccagggaagccgggcctgagagggcaa
aaaggtgatcgaggtttcccaggtctccagggccccgctggtctccccggtgccccaggc
atctccttgccctcactcatagcaggacagcctggtgaccccgggcgaccaggcctagat
ggagaacgaggccgcccaggcccccctggacccccaggtcccactgggccatcctcgagt
caaggcaacaccggagaccctggcttccctggaattcctggacctaaagggcctaaggga
gaccaaggaattccaggtttttctggccttcctggagagctaggactgaaaggcatgaga
ggtgagcctggcttcatggggactccaggcaaggttgggccacctggagacccaggattt
cccgggatgaaggggaaggcagggccaagagaccactgctgccttgccaccatggatcct
actactgactgcctctctctgtgttatctctgcattagtgggcattggcaaatgcttcct
gactgcctgtcacccactgggcccagcgcccagtgttgggccccgaggagacaggatgaa
tatgacccagttcctgccctcgtggagctacccagccaccggggagagagatggataaag
aaggcattgtataatatcacacagtgccatcctggagatatccagatatcctgtggggac
aaacaaggctcttctggcccccaaggtgctcctggacaaacaccaactgcagaagctgtc
caggttcctcctggacccttgggtctaccagggatcgatggcatccctggcctcactggg
gaccctggggctcaaggccctgtaggcctacaaggctccaaaggtttacctggcattccc
ggcaaagatggtcccagtgggctcccaggcccacctggggctcttggtgatcctggtctg
cgtggactgcaaggccctccaggatttgaag
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integrated database retrieval system
