Rhinopithecus bieti (black snub-nosed monkey): 108522748
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Entry
108522748 CDS
T04641
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb05016
Huntington disease
rbb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
108522748 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
108522748 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108522748 (HTT)
04131 Membrane trafficking [BR:
rbb04131
]
108522748 (HTT)
03029 Mitochondrial biogenesis [BR:
rbb03029
]
108522748 (HTT)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108522748 (HTT)
Membrane trafficking [BR:
rbb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108522748 (HTT)
Mitochondrial biogenesis [BR:
rbb03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108522748 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
Motif
Other DBs
NCBI-GeneID:
108522748
NCBI-ProteinID:
XP_017718647
LinkDB
All DBs
Position
Unknown
AA seq
3014 aa
AA seq
DB search
MELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALW
RFAELAHLVRPQKCRPYLVNLLPCLSRTSKRPEESVQETLAAAVPKIMASFGNFANDNEI
KVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEEEHST
LLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYELTLHHTQHQ
DHNVVTGALELLQQLFRTPPPELLQALTTVGGIGQLTAAKEESGGRSRSGSIVELIAGGG
SSCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSAFAASVKDDISGELATSSGVSTPG
SAGHDIITEQPRSQHTLQADSVDLASCDLTSSATDGDEEDILSHSSSQVSAVPSDPAMDL
NDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQDEDEEATGV
LPDAASEAFRNSSMALQQAHLLKNMSHSRQPSDSSVDKFVLRDEATEPGDQENKPCRIKG
DIGRSNDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDVRVSVKALALSCVGAAVALHPE
SFFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSILSRSRFHVG
DWMGAIRTLTGNTFSLVDCIPLLRKTLKDESSVTCKLACTAVRHCVMSLCSSSYSELGLQ
LIIDVLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLLKLQERVL
NNVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHE
TQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFGCCEA
LCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFPLDLSAHQD
ALILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVPMVEQLFSHLLKV
INICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSPKKGSEASA
ASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLR
SALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQF
DGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDTS
GWFDVLQKVSTQLKTNLTSVTKSRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQV
LDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYER
YHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQK
EVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSH
EALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVSTVQLWISGILAILRVLISQST
EDIVLSRIQELSFSPYLISCPVINRLRDGDSNSALEEHSEGKQIKNLPEETFSRFLLQLV
GILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFRSDGC
GGSFYTLDSLNLRARSMITTHPALVLLWCQILLLVNHTDYRWWAEVQQTPKRHSLSSTKL
LSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLI
SLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPTTLKKTLQCLEGIHLSQSGAV
LTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSMAQLPMEELNRIQEYLQSSGL
AQRHQRLYSLLDRFRLSTMQDSLSPSPPVSSHPLDGDGHVSLETVSPDKDWYIHLVKSQC
WTRSDSALLEGAELVNRIPAEDMSAFMMNSEFNLSLLAPCLSLGMSEISGGQKSPLFEAA
REVTLARVSDTVQQLPAVHHVFQSDLPAEPAAYWSKLNDLFGDAALYQSLTTLARALAQY
LVAVSKLPSHLHLPPEKEKDTLKFVVATLEALSWHLIHEQIPLSLDLQAGLDCCCLALQL
PGLWSVVSSAEFVTHACSLIHCVHFILEAVAVQPGEQLLSPERRTNTPKASREEEEEVDP
NTQNPKYITAACEMVAEMVESLQSVLALGHKRNSGVPAFLTSVLRNIVVSLARLPLVNSY
TRVPPLVWKLGWLPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETW
ATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLE
QQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATT
GALISHEKLLLQINPERELGSVSYKLGQVSIHSVWLGNSITPLREEEWDEEEEEEADAPA
PSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSNSARRTPAILISEVVRSLLVVS
DLFTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATCKAAAVLGMDKVVAEPVSRLLE
STLRSSHLPSRVGALHGILYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHCVNIHSQQH
VLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCALRGLERLLLS
EQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSDPNPAAPDS
ESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDIMNKVIGEFLSNQQPY
PQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMATWSLSCFFVSASTSPW
VAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGSPYHR
LLTCLRNVHKVTTC
NT seq
9045 nt
NT seq
+upstream
nt +downstream
nt
atggaactttttctgctgtgcagtgatgacgcagagtcggatgtcagaatggtggctgac
gaatgcctcaacaaagttatcaaagctttgatggattctaatcttccaaggttacagctc
gagctctataaagaaattaaaaagaatggtgcccctcggagtttgcgtgctgccctgtgg
aggtttgccgagctggctcacctggttcggcctcagaaatgcaggccttacctggtgaac
cttctgccgtgcctaagtcgaacaagcaagagacccgaggaatcagtccaggagaccttg
gctgcagctgttcccaaaattatggcttctttcggcaattttgcaaatgacaatgaaatt
aaggttttgttaaaggccttcatagcaaacctgaagtcaagctcccccaccattcggcgg
acagctgctggatcagcagtgagcatctgccagcactcaagaaggacacagtatttctat
agctggctactaaatgtgctcttaggcttactggttcctgtcgaggaggaacactccacc
ctgctgattcttggcgtgctgctcaccctgaggtatttggtgcccttgctgcagcagcag
gtcaaggatacaagcctgaaaggcagcttcggagtgacacggaaagaaatggaggtctct
ccttctgcagagcagcttgtccaggtttatgaactgacgttacatcatacacagcaccaa
gaccacaatgttgtgactggagccctggagctgttgcagcagctcttcagaacgcctccc
cccgagcttctgcaagccctgaccacagtggggggcattgggcagctcaccgctgctaag
gaggagtctggtggccgaagccgtagtgggagtattgtggaacttatagctggagggggt
tcctcatgcagccctgtcctttcaagaaaacaaaaaggcaaagtgctcttaggagaagaa
gaagccttggaggatgactctgaatcgagatcggatgtcagcagctctgcctttgcagcc
tcagtgaaggatgatatcagtggagagctggctacttcttcaggggtttccactccaggg
tcagcaggtcacgacatcatcacagagcagccacggtcacagcacacgctgcaggcggac
tcagtggatctggccagctgtgacttgacaagctctgccactgatggggatgaggaggat
atcttgagccacagttccagccaggtcagcgccgtcccatctgaccctgccatggacctg
aatgatgggacccaggcctcctcgcccatcagcgacagctcccagactaccaccgaaggg
cctgattcagctgtcaccccttcagacagttctgaaattgtgttagacggtaccgacaac
cagtatttgggcctgcagattggacagccccaggatgaagatgaggaagccacaggtgtt
cttcctgatgcagcctcggaggccttcaggaactcttccatggcccttcaacaagcacat
ttattgaaaaacatgagtcacagcaggcagccttctgacagcagtgttgataaatttgtg
ttgagagatgaagctactgaaccgggtgatcaagaaaacaagccttgtcgcatcaaaggt
gacatcggacggtccaatgatgatgattccgcacctcttgtccattgtgtccgcctttta
tctgcttcgtttttgctaacagggggaaaaaatgtgctggttccggacagggatgtgagg
gtcagcgtgaaggccctggccctcagctgtgtgggagcagctgtggccctccacccggaa
tctttcttcagcaaactctataaagttcctcttgacaccacggaataccctgaggaacaa
tatgtctcagatatcttgaactacatcgatcatggagacccacaggttcgaggagccact
gccattctctgtgggaccctcatctgctccatcctcagcaggtcccgcttccacgtggga
gattggatgggcgccattagaaccctgacaggaaatacattttctttggtggattgcatt
cctttgctgcggaaaacactgaaggatgagtcttctgttacatgcaagctggcttgtaca
gctgtgaggcattgtgtcatgagtctctgcagcagcagctacagtgagttaggactgcag
ctgatcatcgacgtgctgactctgaggaacagttcctattggctggtgaggacagagctt
ctggaaacccttgcggagatcgacttcaggctggtgagctttttggaggcaaaagcagaa
aacttacacagaggggctcatcattatacagggcttttaaaactgcaagaacgagtgctc
aataatgttgtcatccatttgcttggggatgaagaccccagggtgcgacatgttgctgca
gcatcattaattaggcttgtcccaaagctgttttataaatgtgaccaaggacaagctgat
ccagtagtggccgtggcaagagatcaaagcagtgtttacctgaaacttctcatgcatgag
acgcagcctccatctcatttctccgtcagcacaataaccagaatatatagaggctataac
ctactaccaagcataacagatgtcactatggaaaataacctttcaagagttattgcagca
gtttctcatgaactgatcacatcaaccacgagagcactcacttttggatgctgtgaagct
ttgtgtcttctttccactgccttcccagtttgcatttggagtttaggttggcactgtgga
gtgcctccactgagtgcctcagatgagtctaggaagagctgtaccgttgggatggccaca
atgattctgaccctgctctcgtcagcttggttcccattggatctctcagcccatcaagat
gctttgattttggccggaaacttgcttgcagccagtgctcctaaatctctgagaagttca
tgggcctctgaagaagaagccaacccagcagccaccaagcaagaggaggtctggccagcc
ctgggggaccgggccttggtgcccatggtggagcagctcttctcccacctgctgaaggtg
atcaacatttgtgcacatgtcctggacgacgtggctcctggacctgcaataaaggcagcc
ttgccttctctaacaaatcccccttctctaagtcccatccgacgaaaggggaaggagaaa
gaaccaggagaacaagcatctgtaccgttgagtcccaagaaaggcagtgaggccagtgca
gcttctagacaatctgatacctcgggtcctgttacaacaagtaaatcctcatcactgggg
agtttctatcatcttccttcatacctcaaactgcatgatgtcctgaaagctacgcacgct
aactacaaggtcaccttggatcttcagaacagcacggaaaaatttggagggtttctccgc
tcagccttggacgttctctctcagattctagagctggccacactgcaggacattgggaag
tgtgttgaggagatcctaggatacctgaaatcctgctttagtcgagaaccaatgatggca
actgtttgtgttcaacaattgttgaagactctctttgggacaaacttggcctcccagttt
gacggcttatcttccaaccccagcaagtcacaaggccgagcacagcgccttggctcctcc
agtgtgaggccaggcttgtaccactactgcttcatggccccgtacacccacttcacccag
gccctcgctgacgccagcctgaggaacatggtgcaggcggagcaggagcacgacacctcg
ggatggtttgatgtcctccagaaagtgtctacccagttgaagacaaacctcacaagtgtc
acaaagagccgcgcagataagaatgctattcataatcacattcgtttgtttgaacctctt
gttataaaagctttaaaacagtacacgacaacaacatctgtgcagttacagaagcaggtt
ttagatttgctggcgcagctggttcagttacgggttaattactgtcttctggattcagat
caggtgtttattggctttgtattgaaacagttcgaatacattgaggtgggccagttcagg
gaatcagaggcaatcattccaaatatctttttcttcttggtattactgtcttatgaacgc
tatcattcaaaacagatcattggaattcctaaaatcattcagctctgtgatggcatcatg
gccagtggaaggaaggctgtgacacacgccataccggctctgcagcccatagtccatgac
ctctttgtattaagaggaacaaacaaagctgatgcaggaaaagagcttgaaacccaaaaa
gaagtggtggtatcaatgttactgagactcatccagtaccatcaggtgttggagatgttc
attcttgtcctgcagcagtgccacaaggagaatgaagacaagtggaagcgactgtctcga
cagatagctgacatcatcctcccaatgttagccaaacagcagatgcacattgactctcat
gaagcccttggagtgttaaatacattatttgagattttggccccttcctccctccgtccg
gtggacatgcttttacggagtatgttcgtcactccaaacacaatggcatctgtgagcact
gttcaactgtggatatcaggaattctggccattttgagggttctgatttcccagtcaact
gaagatattgttctttctcgtattcaggagctctctttttctccatatttaatctcctgt
ccagtaattaataggctaagagatggggacagtaattcagcactagaagaacacagtgaa
gggaaacaaataaagaatttgccagaagaaacattttcaaggtttctattgcaactggtg
ggtattcttttagaagacattgttacaaaacagctgaaggtggaaatgagtgagcagcaa
catactttctattgccaagaactaggcactctgctaatgtgtctgatccacatcttcaag
tctggaatgttccggagaatcacagcagctgccaccagactgttccgcagtgatggctgt
ggcggcagtttctacaccctggacagcttgaatttgcgggctcgttccatgatcaccacc
cacccggccctggtgctgctctggtgtcagatcctgctgcttgtcaaccacaccgactac
cgctggtgggcagaagtgcagcagaccccgaaaagacacagtctgtccagcacaaagtta
cttagtccccagatgtctggagaagaagaggattctgacttggcagccaaacttggaatg
tgcaatagagaaatagtacgaagaggggctctcattctcttctgtgattatgtttgtcag
aacctccatgactccgagcacttaacgtggctcattgtaaatcacattcaagatctgatc
agcctttcccacgagcctccagtgcaggacttcatcagtgctgttcaccggaactctgct
gccagcggcctcttcatccaggcaattcagtctcgttgtgaaaacctttcagctccaacc
actctgaagaaaactcttcagtgcttggaagggatccatctcagccagtcgggagctgtg
ctcacgttgtatgtggacaggcttctgtgcacccctttccgtgtgctggctcgcatggtc
gacatccttgcttgtcgccgggtagaaatgcttctggctgcaaatttacagagcagcatg
gcccagttgccgatggaagaactcaacagaatccaggaataccttcagagcagcgggctc
gctcagagacaccaaaggctctattccctgctggataggttccgtctctctaccatgcaa
gactcacttagtccgtctcctccagtctcttcccacccgctggacggggatgggcacgtg
tcactggaaacagtgagtccggacaaagactggtacattcatcttgtcaaatcgcagtgt
tggaccaggtcagattctgcactgctggaaggtgcagagctggtgaatcggattcctgct
gaagatatgagtgccttcatgatgaactcggagttcaacctaagcctgctagctccatgc
ttaagcctagggatgagtgaaatttctggtggccagaagagtccgctttttgaagcagcc
cgtgaggtgactctggcccgcgtgagcgacaccgtgcagcagctccctgctgtccatcac
gtcttccagtctgacctgcctgcagagccggcggcctactggagcaagttgaatgatcta
tttggggatgctgcactgtatcagtccctgaccactctggcccgggccctggcacagtac
ctggtggcagtctccaaactgcccagtcacttgcaccttcctcctgagaaagagaaggac
accctgaaattcgtggtggcaacccttgaggccctgtcctggcatttgatccatgagcag
attccgctgagtctggatctccaggcagggctggactgctgctgcctggccctgcagctg
cctggcctctggagcgtggtctcctccgcagagtttgtgacccacgcctgctccctcatc
cactgtgtgcacttcatcctggaggctgttgcagtgcagcctggagagcagcttcttagt
ccagaaagaaggacaaataccccaaaagcctccagagaggaggaggaggaagtagatcca
aacacacagaatccgaagtatatcaccgcagcctgtgagatggtggcagaaatggtggag
tctctgcagtcggtgttggctttgggtcataaaaggaatagcggcgtgccggcgtttctc
acatcagtgctcaggaacatcgttgtcagcctggcccgcctgccccttgtcaacagctac
acacgtgtgccgccactggtgtggaagcttggatggttacccaaaccgggaggggatttt
ggcacagcattccctgagatccccgtggagttcctccaggaaaaggaagtctttaaggag
ttcatctaccgcatcaacacactaggctggaccagtcgtactcagtttgaagaaacttgg
gccaccctccttggtgtcctggtgacgcagcccctcgtgatggagcaagaggagagccca
ccagaagaagacacagagaggacacagatcaacgtcctggccgtgcaggccatcacctca
ctggtgctcagtgcaatgaccgtgcctgtggccggcaacccagctgtgagctgcttggag
cagcagccccggaacaagcctctgaaagctctggacacgaggtttgggaggaagctgagc
attatcagagggattgtagagcaagagattcaagcaatggtttcaaagagagagaacatc
gccacccatcatttataccaggcgtgggatcctgtcccttctctgtccccggctactaca
ggtgccctcatcagccacgagaagctgctgctgcagatcaaccccgagcgggagctgggg
agcgtgagctacaaactcggccaggtgtccatacactccgtgtggctggggaacagcatc
acacccctgagggaggaggaatgggacgaggaggaggaggaggaggccgacgcccctgca
ccttcatcaccacccacatctccagtcaactccaggaaacaccgggctggagttgacatc
cattcctgttcgcagtttttacttgagttgtacagccgctggatcctgccatccaactca
gccaggagaaccccagccatcctgatcagtgaggtggttcgatcccttctggtggtctca
gacttgttcactgagcgcaaccagtttgagctgatgtatgtgacgctgacagaactgcga
agggtgcacccttcagaagacgagatcctcgctcagtacctggtgcccgccacctgcaag
gcagctgccgtccttgggatggacaaggttgtggcggagcctgtcagccgcctgctggag
agcacgctcaggagcagccacctgcccagcagggtcggagccctgcacggcatcctctat
gtgctggagtgcgacctgctggacgatactgccaagcagctcatcccagtcatcagcgac
tatctcctctccaacctgaaagggatcgcacactgcgtgaacattcacagccagcagcac
gtactggtcatgtgtgccactgcgttttacctgattgagaactatcctctggacgtgggg
ccggaattttcagcatccataatacagatgtgtggggtgatgctgtccggaagtgaggag
tccaccccctctatcatttaccactgtgccctcagaggcctggagcgcctcctgctctct
gagcagctctcccgcctggatgcagaatccctggtcaagctgagtgtggacagagtgaac
gtgcacagcccgcaccgggccatggcggctctgggcttgatgctcacctgcatgtacaca
ggaaaggagaaagtcagtccgggtagaacttcagaccctaatcctgcagccccagacagc
gagtcggtgattgttgctatggagcgggtgtctgttctttttgataggatcaggaagggc
tttccttgtgaagccagagtggtggcgaggatcctgccccagtttctagacgacttcttc
ccaccccaggacatcatgaacaaagtcatcggagagtttctgtccaaccagcagccatac
ccccagttcatggccaccgtggtgtataaggtgtttcagactctgcacagcaccgggcag
tcatccatggtccgggactgggtcatgctgtccctctccaacttcacgcagaggacccca
gtcgccatggccacatggagcctctcctgcttctttgtcagcgcgtccaccagcccgtgg
gttgcggcgatcctcccacatgtcatcagcaggatgggaaagctggagcaggtggacgtg
aaccttttctgcctggttgccacagacttttacagacaccagatagaggaggagctcgac
cgcagggccttccagtctgtgtttgaggtggttgcagctccaggaagcccatatcaccgg
ctgctgacttgtttacgaaatgtccacaaggtcaccacctgctga
DBGET
integrated database retrieval system
